Contig 003957:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF008M14+                                                         CTATAAATGTNGC
                      ____________________________________________________________
consensus                                                            CTATAAATGTNGC
 
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rJMFF026J20+                               CCTGTAGCCATTATCCGAGGTTGTATGTGCACTAGGT-A
rJMFF008M14+          TTTCGGGGGNGACTGGGAAACCCTGTAGCCATTATCCGAGGTGGTATGTGCACTAGGTAA
                      ____________________________________________________________
consensus             TTTCGGGGGNGACTGGGAAACCCTGTAGCCATTATCCGAGGTTGTATGTGCACTAGGTAA
 
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rJMFF026J20+          AATCCCCGCNTTGTGACCTTAGCTGG-CAAAGGACCACAATGAGGTAGTTGATCAGTAAN
rJMFF008M14+          AATCCCCGCCTTGTGACCTTAGCTGGCCAAAGGACCACAATGAGGTAGTTGATCAGTAAA
                      ____________________________________________________________
consensus             AATCCCCGCCTTGTGACCTTAGCTGGCCAAAGGACCACAATGAGGTAGTTGATCAGTAAA
 
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rJMFF026J20+          CCANCCTAGGTTACCCATAGCTGACTGGTTCAANCCGTGAAGGTAGGCTACTCCCGTTGA
rJMFF008M14+          CCANCCTAGGTTACCCATAGCTGACTGGTTCAAACCGTGAAGGTAGGCTACTCCCGTTGA
                      ____________________________________________________________
consensus             CCANCCTAGGTTACCCATAGCTGACTGGTTCAAACCGTGAAGGTAGGCTACTCCCGTTGA
 
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rJMFF026J20+          GAGTCAGTCTTGTACCTTGTGGTTATCAAGTCAACAACCTGACCAACTTAGCTGAAGCTA
rJMFF008M14+          GAGTCAGTCTTGTACNTTGTGGTTATCAAGTCAACAACCTGACCAACTTAGCTGAAGCTA
                      ____________________________________________________________
consensus             GAGTCAGTCTTGTACCTTGTGGTTATCAAGTCAACAACCTGACCAACTTAGCTGAAGCTA
 
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rJMFF026J20+          TAAATGTTGCTCTCGGGGGTGACATGGGAAACCTGTAGCCGCTATCCGAGGTTGTATGTG
rJMFF008M14+          TAAATGTTGCTCTCGGGGGTGACATGGGAAACCTGTAGCCGCTATCCGAGGTTGTATGTG
                      ____________________________________________________________
consensus             TAAATGTTGCTCTCGGGGGTGACATGGGAAACCTGTAGCCGCTATCCGAGGTTGTATGTG
 
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rJMFF026J20+          CACTAGGTAAATCTCACATTGTGATCTTAGCTGGCAAAGGACCACAAGAAGGTAGTTGAT
rJMFF008M14+          CACTAGGTAAATCTCACATTGTGATCTTAGCTGGCAAAGGACCACAAGAAGGTAGTTGAT
                      ____________________________________________________________
consensus             CACTAGGTAAATCTCACATTGTGATCTTAGCTGGCAAAGGACCACAAGAAGGTAGTTGAT
 
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rJMFF026J20+          TAGGAAACCAACCTAGGTTACCCATAGGCCCATAGCTGACTGGTTCAAACCAAGAAGGCC
rJMFF008M14+          TAGGAAACCAACCTAGGTTACCCATAGGCCCATAGCTGACTGGTTCAAACCAAGAAGGCC
                      ____________________________________________________________
consensus             TAGGAAACCAACCTAGGTTACCCATAGGCCCATAGCTGACTGGTTCAAACCAAGAAGGCC
 
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rJMFF026J20+          AATAGGCTACTCCCGCTGAGAGTCAGAATTTTACCATGTGGTTACTGAGTCAACAGCCTG
rJMFF008M14+          AATAGGCTACTCCCGCTGAGAGTCAGAATTTTACCATGTGGTTACTGAGTCAACAGCCTG
                      ____________________________________________________________
consensus             AATAGGCTACTCCCGCTGAGAGTCAGAATTTTACCATGTGGTTACTGAGTCAACAGCCTG
 
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rJMFF026J20+          ACCGACTTAGCTGAAGCTATAGATGTTGCTCTTGAAACTACAATGTTGTGCTTGCAGTTT
rJMFF008M14+          ACCGACTTAGCTGAAGCTATAGATGTTGCTCTTGAAACTACAATGTTGTGCTTGCAGTTT
                      ____________________________________________________________
consensus             ACCGACTTAGCTGAAGCTATAGATGTTGCTCTTGAAACTACAATGTTGTGCTTGCAGTTT
 
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rJMFF026J20+          TGAAGCTAGAGCATGTTCAGATCCTATGCATTTGTCTTTTGACATTGTAGCTGGAAATAA
rJMFF008M14+          TGAAGCTAGAGCATGTTCAGATCCTATGCATTTGTCTTTTGACATTGTAGCTGGAAATAA
                      ____________________________________________________________
consensus             TGAAGCTAGAGCATGTTCAGATCCTATGCATTTGTCTTTTGACATTGTAGCTGGAAATAA
 
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rJMFF026J20+          AAACTTGAGATTTTTGACCATTGTTTTGCAGTTTGTTGATGAGGAAGTGGAATGGTTGCA
rJMFF008M14+          AAACTTGAGATTTTTGACCATTGTTTTGCAGTTTGTTGATGAGGAAGTGGAATGGTTGCA
                      ____________________________________________________________
consensus             AAACTTGAGATTTTTGACCATTGTTTTGCAGTTTGTTGATGAGGAAGTGGAATGGTTGCA
 
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rJMFF026J20+          TATTGACATGGGTGGTCCAGCGTGGGATTACAAGAAGAACATTGCAACTGGGTTTGGCAC
rJMFF008M14+          TATTGACATGGGTGGTCCAGCGTGGGATTACAAGAAGAACATTGCAACTGGGTTTGGCAC
                      ____________________________________________________________
consensus             TATTGACATGGGTGGTCCAGCGTGGGATTACAAGAAGAACATTGCAACTGGGTTTGGCAC
 
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rJMFF026J20+          CACTACTATGGTGGAATGGGTGCTCAAACACTCTTCTTAGATTAATTTTGGTTCTTCTAA
rJMFF008M14+          CACTACTATGGTGGAATGGGTGCTCAAACACTCTTCTTAGATTAATTTTGGTTCTTCTAA
                      ____________________________________________________________
consensus             CACTACTATGGTGGAATGGGTGCTCAAACACTCTTCTTAGATTAATTTTGGTTCTTCTAA
 
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rJMFF026J20+          GGTGGATTCTTCATGTCCACTAGTTGTAAATGAAGTTGGTTTGATTAACAAGAGGAAA  
rJMFF008M14+          GGTGGATTCTTCATGTCCACTAGTTGTAAATGAAGTTGGTTTGATTAACAAGAGGAAAGA
                      ____________________________________________________________
consensus             GGTGGATTCTTCATGTCCACTAGTTGTAAATGAAGTTGGTTTGATTAACAAGAGGAAAGA