Contig 003949:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001N12Sequence549003949 (4)ref|XP_006365061.1|3e-11PREDICTED: wall-associated receptor kinase-like 1-like [Solanum tuberosum]751003949 (4)ref|XP_010317039.1|4e-13PREDICTED: wall-associated receptor kinase-like 1 [Solanum lycopersicum]
JMFF006N15Sequence601003949 (4)ref|XP_006365061.1|3e-16PREDICTED: wall-associated receptor kinase-like 1-like [Solanum tuberosum]796003949 (4)ref|XP_010317039.1|1e-19PREDICTED: wall-associated receptor kinase-like 1 [Solanum lycopersicum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF001N12- AGAGGTATACAAGAGAAGGGGAAAGAGTACGTTAAAGTGAGAATCA
JMFF006N15- AGAGGTATACAAGAGAAGGGGAAAGAGTACGTTAAAGTGAGAATCA
                      ____________________________________________________________
consensus AGAGGTATACAAGAGAAGGGGAAAGAGTACGTTAAAGTGAGAATCA
 
. : . : . : . : . : . :
JMFF001N12- TTATGAGGGCCGCCGGAAAAGAAATAGTAGTGGCGACTGTGCTGATGATGATGAGCTTCA
JMFF006N15- TTATGAGGGCCGCCGGAAAAGAAATAGTAGTGGCGACTGTGCTGATGATGATGAGCTTCA
                      ____________________________________________________________
consensus TTATGAGGGCCGCCGGAAAAGAAATAGTAGTGGCGACTGTGCTGATGATGATGAGCTTCA
 
. : . : . : . : . : . :
JMFF001N12- CAGTGATGCTCACTTTGGCAGCAGAATACGAGATACCGTTGGACGACTACGACGACAGAT
JMFF006N15- CAGTGATGCTCACTTTGGCAGCAGAATACGAGATACCGTTGGACGACTACGACGACAGAT
                      ____________________________________________________________
consensus CAGTGATGCTCACTTTGGCAGCAGAATACGAGATACCGTTGGACGACTACGACGACAGAT
 
. : . : . : . : . : . :
JMFF001N12- ACTATGATGATGAAGCTGAGAACTACAAGGAAGATGGGATATCTATGGTTCCAAAGGGTT
JMFF006N15- ACTATGATGATGAAGCTGAGAACTACAAGGAAGATGGGATATCTATGGTTCCAAAGGGTT
                      ____________________________________________________________
consensus ACTATGATGATGAAGCTGAGAACTACAAGGAAGATGGGATATCTATGGTTCCAAAGGGTT
 
. : . : . : . : . : . :
JMFF001N12- GTCGAGACACTTGCGGCAACGTTAGCATTTACTACCCTTTTGGAATTGGACCCAGCAAAG
JMFF006N15- GTCGAGACACTTGCGGCAACGTTAGCATTTACTACCCTTTTGGAATTGGACCCAGCAAAG
rJMFF006N15+ ATTGGACCCAGCAAAG
                      ____________________________________________________________
consensus GTCGAGACACTTGCGGCAACGTTAGCATTTACTACCCTTTTGGAATTGGACCCAGCAAAG
 
. : . : . : . : . : . :
JMFF001N12- ATTGTTATTTAAACAAATGGTTCCTCATAAATTGCACCAAATCCTCCTCCGATGGTGTCG
JMFF006N15- ATTGTTATTTAAACAAATGGTTCCTCATAAATTGCACCAAATCCTCCTCCGATGGTGTCG
rJMFF001N12+ CATAAATTGCACCAAATCCTCCTCCGATGGTGTCG
rJMFF006N15+ ATTGTTATTTAAACAAATGGTTCCTCATAAATTGCACCAAATCCTCCTCCGATGGTGTCG
                      ____________________________________________________________
consensus ATTGTTATTTAAACAAATGGTTCCTCATAAATTGCACCAAATCCTCCTCCGATGGTGTCG
 
. : . : . : . : . : . :
JMFF001N12- AGAAACCTTTCTTGAGCTCCTTTTCTGATGGCAAGAATGGGGTAAGAGAGATTCTGAGCA
JMFF006N15- AGAAACCTTTCTTGAGCTCCTTTTCTGATGGCAAGAATGGGGTAAGAGAGATTCTGAGCA
rJMFF001N12+ AGAAACCTTTCTTGAGCTCCTTTTCTGATGGCAAGAATGGGGTAAGAGAGATTCTGAGCA
rJMFF006N15+ AGAAACCTTTCTTGAGCTCCTTTTCTGATGGCAAGAATGGGGTAAGAGAGATTCTGAGCA
                      ____________________________________________________________
consensus AGAAACCTTTCTTGAGCTCCTTTTCTGATGGCAAGAATGGGGTAAGAGAGATTCTGAGCA
 
. : . : . : . : . : . :
JMFF001N12- TTTCCAATGTAAGACAATCAATAATAATGAAAGAGTCGTTTTCTCCTCTCTGCCATACCA
JMFF006N15- TTTCCAATGTAAGACAATCAATAATAATGAAAGAGTCGTTTTCTCCTCTCTGCCATACCA
rJMFF001N12+ TTTCCAATGTAAGACAATCAATAATAATGAAAGAGTCGTTTTCTCCTCTCTGCCATACCA
rJMFF006N15+ TTTCCAATGTAAGACAATCAATAATAATGAAAGAGTCGTTTTCTCCTCTCTGCCATACCA
                      ____________________________________________________________
consensus TTTCCAATGTAAGACAATCAATAATAATGAAAGAGTCGTTTTCTCCTCTCTGCCATACCA
 
. : . : . : . : . : . :
JMFF001N12- CCGCCGGGTCCGCCGTGGGAAGCAATAATCTCTCCATAATTAGCAACACAAAATTATCTG
JMFF006N15- CCGCCGGGTCCGCCGTGGGAAGCAATAATCTCTCCATAATTAGCAACACAAAATTATCTG
rJMFF001N12+ CCGCCGGGTCCGCCGTGGGAAGCAATAATCTCTCCATAATTAGCAACACAAAATTATCTG
rJMFF006N15+ CCGCCGGGTCCGCCGTGGGAAGCAATAATCTCTCCATAATTAGCAACACAAAATTATCTG
                      ____________________________________________________________
consensus CCGCCGGGTCCGCCGTGGGAAGCAATAATCTCTCCATAATTAGCAACACAAAATTATCTG
 
. : . : . : . : . : . :
JMFF001N12- GAACCCCATTCTTTTACTCTTCC
JMFF006N15- GAACCCCATTCTTTTACTCTTCCAGTTACAACAGGTTCATGTTTTATGGTTGCGGCGGCG
rJMFF001N12+ GAACCCCATTCTTTTACTCTTCCAGTTACAACAGGTTCATGTTTTATGGTTGCGGCGGCG
rJMFF006N15+ GAACCCCATTCTTTTACTCTTCCAGTTACAACAGGTTCATGTTTTATGGTTGCGGCGGCG
                      ____________________________________________________________
consensus GAACCCCATTCTTTTACTCTTCCAGTTACAACAGGTTCATGTTTTATGGTTGCGGCGGCG
 
. : . : . : . : . : . :
JMFF006N15- CTGTCCTCACTACGC
rJMFF001N12+ CTGTCCTCACTACGCCCGGTCAAGAATTCACAATGGCCGGTTGCAAGTTGAGTTGCAGCA
rJMFF006N15+ CTGTCCTCACTACGCCCGGTCAAGAATTCACAATGGCCGGTTGCAAGTTGAGTTGCAGCA
                      ____________________________________________________________
consensus CTGTCCTCACTACGCCCGGTCAAGAATTCACAATGGCCGGTTGCAAGTTGAGTTGCAGCA
 
. : . : . : . : . : . :
rJMFF001N12+ GCAATAACACCACGGCGGCACCAAAATTTGCATATGATTGCAATGGCATAAACTGCTGCG
rJMFF006N15+ GCAATAACACCACGGCGGCACCAAAATTTGCATATGATTGCAATGGCATAAACTGCTGCG
                      ____________________________________________________________
consensus GCAATAACACCACGGCGGCACCAAAATTTGCATATGATTGCAATGGCATAAACTGCTGCG
 
. : . : . : . : . : . :
rJMFF001N12+ ATCTTAGTTTTGACTACGATGTAAATGCATACCAAATCGACATCACAGATTCATCCATCG
rJMFF006N15+ ATCTTAGTTTTGACTACGATGTAAATGCATACCAAATCGACATCACAGATTCATCCATCG
                      ____________________________________________________________
consensus ATCTTAGTTTTGACTACGATGTAAATGCATACCAAATCGACATCACAGATTCATCCATCG
 
. : . : . : . : . : . :
rJMFF001N12+ TCAACAACGCCTGCAACTATGCCTTCTTTCTTGCTACTGGTGATGATTTTACTACTACTT
rJMFF006N15+ TCAACAACGCCTGCAACTATGCCTTCTTTCTTGCTACTGGTGATGATTTTACTACTACTT
                      ____________________________________________________________
consensus TCAACAACGCCTGCAACTATGCCTTCTTTCTTGCTACTGGTGATGATTTTACTACTACTT
 
. : . : . : . : . : . :
rJMFF001N12+ CTTCCCGATTGAGCCTTCAAAGGATTAGCAACCTGCTGCCGGAAGACAAGCTGGTTGTCC
rJMFF006N15+ CTTCCCGATTGAGCCTTCAAAGGATTAGCAACCTGCTGCCGGAAGACAAGCTGGTTGTCC
                      ____________________________________________________________
consensus CTTCCCGATTGAGCCTTCAAAGGATTAGCAACCTGCTGCCGGAAGACAAGCTGGTTGTCC
 
. : . : . : . : . : . :
rJMFF001N12+ CGGTGGTTTGGAGGTGGAGCGTCACAAGAGACGACTTGAGTTACTTGCCCCCCACCTACT
rJMFF006N15+ CGGTGGTTTGGAGGTGGAGCGTCACAAGAGACGACTTGAGTTACTTGCCCCCCACCTACT
                      ____________________________________________________________
consensus CGGTGGTTTGGAGGTGGAGCGTCACAAGAGACGACTTGAGTTACTTGCCCCCCACCTACT
 
. : . : . : . : . : . :
rJMFF001N12+ CACGCGACTGCGATCGATATGAGAAAATCTTTCCTCCGCAATTACGAGGGACATATTGGA
rJMFF006N15+ CACGCGACTGCGATCGATATGAGAAAATCTTTCCTCCGCAATTACGAGGGACATATTGGA
                      ____________________________________________________________
consensus CACGCGACTGCGATCGATATGAGAAAATCTTTCCTCCGCAATTACGAGGGACATATTGGA
 
. : . : . : . : . : . :
rJMFF001N12+ GCTGTAGCTGCAAATTTCTGGAATACGGTAACGCTTACTTACCAAA
rJMFF006N15+ GCTGTAGCTGCAAATTTCTGGAATACGGTAACGCTTACTTACCAAATGGATGCCCAAGGT
                      ____________________________________________________________
consensus GCTGTAGCTGCAAATTTCTGGAATACGGTAACGCTTACTTACCAAATGGATGCCCAAGGT