Contig 003945:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006E22Sequence385007296 (4)ref|XP_010242658.1|2e-77PREDICTED: stromal 70 kDa heat shock-related protein, chloroplastic-like [Nelum764003945 (2)gb|ABZ04080.1|3e-90chloroplast heat shock protein 70-1 [Ipomoea nil]
JMFF033B12Sequence574007296 (4)gb|ABZ04080.1|5e-128chloroplast heat shock protein 70-1 [Ipomoea nil]708003945 (2)gb|ABZ04080.1|6e-76chloroplast heat shock protein 70-1 [Ipomoea nil]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF006E22+ ACGAGGAGTTCCTCAAATCGAGGTCAAATTTGACATTGATGCAA
                      ____________________________________________________________
consensus ACGAGGAGTTCCTCAAATCGAGGTCAAATTTGACATTGATGCAA
 
. : . : . : . : . : . :
rJMFF033B12+ CTGTTGCTGCTGTTGACAAGGGCACTGGGAAGAAACAAGACATCACCA
rJMFF006E22+ ATGGCATTCTCTCTGTTGCTGCTGTTGACAAGGGCACTGGGAAGAAACAAGACATCACCA
                      ____________________________________________________________
consensus ATGGCATTCTCTCTGTTGCTGCTGTTGACAAGGGCACTGGGAAGAAACAAGACATCACCA
 
. : . : . : . : . : . :
rJMFF033B12+ TTACAGGTGCCAGCACCCTTCCCAACGATGAGGTAGATAGGATGGTGAAGGAAGCTGAAA
rJMFF006E22+ TTACAGGTGCCAGCACCCTTCCCAACGATGAGGTAGATAGGATGGTGAAGGAAGCTGAAA
                      ____________________________________________________________
consensus TTACAGGTGCCAGCACCCTTCCCAACGATGAGGTAGATAGGATGGTGAAGGAAGCTGAAA
 
. : . : . : . : . : . :
rJMFF033B12+ GATTTGCCCAAGAAGACAAGGAGAAGAGAGACGCCATAGACACAAAGAACCAGGCATATT
rJMFF006E22+ GATTTGCCCAAGAAGACAAGGAGAAGAGAGACGCCATAGACACAAAGAACCAGGCATATT
                      ____________________________________________________________
consensus GATTTGCCCAAGAAGACAAGGAGAAGAGAGACGCCATAGACACAAAGAACCAGGCATATT
 
. : . : . : . : . : . :
rJMFF033B12+ CTGTTGTTTACCAGACAGAGAAGCAACTGAAGGATCTGGGAGACAAAATACCCGGGTCAG
rJMFF006E22+ CTGTTGTTTACCAGACAGAGAAGCAACTGAAGGATCTGGGAGACAAAATACCCGGGTCAG
                      ____________________________________________________________
consensus CTGTTGTTTACCAGACAGAGAAGCAACTGAAGGATCTGGGAGACAAAATACCCGGGTCAG
 
. : . : . : . : . : . :
rJMFF033B12+ TGAAAGAGAAAGTCGAGGCTAAGCTTGGAGAGCTCAAAGATGCAATCTCAGGGGGATCAA
rJMFF006E22+ TGAAAGAGAAAGTCGAGGCTAAGCTTGGAGAGCTCAAAGATGCAATCTCAGGGGGATCAA
                      ____________________________________________________________
consensus TGAAAGAGAAAGTCGAGGCTAAGCTTGGAGAGCTCAAAGATGCAATCTCAGGGGGATCAA
 
. : . : . : . : . : . :
rJMFF033B12+ CCCAGGCCATGAAGGATGCTATGGCTGCCCTGAATCAGGAAGTCATGCAGATTGGTCAGT
rJMFF006E22+ CCCAGGCCATGAAGGATGCTATGGCTGCCCTGAATCAGGAAGTCATGCAGATTGGTCAGT
                      ____________________________________________________________
consensus CCCAGGCCATGAAGGATGCTATGGCTGCCCTGAATCAGGAAGTCATGCAGATTGGTCAGT
 
. : . : . : . : . : . :
rJMFF033B12+ CACTCTACAACCAGCCTGGTGCAGCACCGGGCGCTGGTCCAGCACCTGGCGGTTCAGCAG
rJMFF006E22+ CACTCTACAACCAGCCTGGTGCAGCACCGGGCGCTGGTCCAGCACCTGGCGGTTCAGCAG
                      ____________________________________________________________
consensus CACTCTACAACCAGCCTGGTGCAGCACCGGGCGCTGGTCCAGCACCTGGCGGTTCAGCAG
 
. : . : . : . : . : . :
rJMFF033B12+ AGCCCTCAGAATCATCATCATCATCAGGGAAGGGACCTGATGGAGATGTCATTGATGCTG
rJMFF006E22+ AGCCCTCAGAATCATCATCATCATCAGGGAAGGGACCTGATGGAGATGTCATTGATGCTG
                      ____________________________________________________________
consensus AGCCCTCAGAATCATCATCATCATCAGGGAAGGGACCTGATGGAGATGTCATTGATGCTG
 
. : . : . : . : . : . :
rJMFF033B12+ ATTTCACTGACAGCAA
rJMFF006E22+ ATTTCACTGACAGCAACTAGGACTGGCTGAAGATTAAGATGAATGAATTTTTAGCCATGT
                      ____________________________________________________________
consensus ATTTCACTGACAGCAACTAGGACTGGCTGAAGATTAAGATGAATGAATTTTTAGCCATGT
 
. : . : . : . : . : . :
rJMFF006E22+ CTCCTTTTTGGTTTCTTTCCCCCCCTAAAATGTGTATAATTGTGTCTTCTGAATTTTGGG
                      ____________________________________________________________
consensus CTCCTTTTTGGTTTCTTTCCCCCCCTAAAATGTGTATAATTGTGTCTTCTGAATTTTGGG
 
. : . : . : . : . : . :
rJMFF006E22+ AAACATTGCAGTAGAGCAATAGAGGTTTAGGATGTTGAAATAGGTGGACAGGACCTTCTA
                      ____________________________________________________________
consensus AAACATTGCAGTAGAGCAATAGAGGTTTAGGATGTTGAAATAGGTGGACAGGACCTTCTA
 
. : . : . : . : . : . :
rJMFF006E22+ TTCTTCTTGTCCCCTTGGTAGTGCCTGCTTCTTTGACTTGGACCAGGTGCTACTTATACT
                      ____________________________________________________________
consensus TTCTTCTTGTCCCCTTGGTAGTGCCTGCTTCTTTGACTTGGACCAGGTGCTACTTATACT