Contig 003942:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF015H10+                        TTCTTCNACCCAGATACACTCATCTTCATGACGGTGCTGGGTTGAA
rJMFF005M04+                                                                  TGAA
                      ____________________________________________________________
consensus                           TTCTTCNACCCAGATACACTCATCTTCATGACGGTGCTGGGTTGAA
 
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rJMSF015H10+          GAACCAACGGAGTAATGGGCGAGTGCAGGCACAACAGAGGCGCAATCTGAGGCCATCGCC
rJMFF005M04+          GAACCAACGGAGTAATGGGCGAGTGCAGGCACAACAGAGGCGCAATNTGAGGCCATCGCC
                      ____________________________________________________________
consensus             GAACCAACGGAGTAATGGGCGAGTGCAGGCACAACAGAGGCGCAATCTGAGGCCATCGCC
 
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rJMSF015H10+          AGCGTGCTCTGTCAGCCAAGAGCTGCGGTTACCTCAGGAATGGACCTACTGATAACCAAA
rJMFF005M04+          AGCGTGCTCTGTCAGCCAAGAGCTGCGGTTACCTCAGGAATGGACCTACTGATAACCAAA
                      ____________________________________________________________
consensus             AGCGTGCTCTGTCAGCCAAGAGCTGCGGTTACCTCAGGAATGGACCTACTGATAACCAAA
 
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rJMSF015H10+          GCCCCAAGCCATCTATTAGCAGTAGCATCATATGTTTCTTTCAGGAAGCCTCTGCAAAAG
rJMFF005M04+          G-CCCAAGCCATCTATTAGCAGTAGCATCATATGTTTCTTTCAGGAAGCCTCTGCAAAAG
                      ____________________________________________________________
consensus             GCCCCAAGCCATCTATTAGCAGTAGCATCATATGTTTCTTTCAGGAAGCCTCTGCAAAAG
 
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rJMSF015H10+          AGGTGACGAGTGATTTTGAAGATATATAAATAGTATTTGCAAAAATAAAAGAAGAATAGG
rJMFF005M04+          AGGTGACGAGTGATTTTGAAGATATATAAATAGTATTTGCAAAAATAAAAGAAGAATAGG
                      ____________________________________________________________
consensus             AGGTGACGAGTGATTTTGAAGATATATAAATAGTATTTGCAAAAATAAAAGAAGAATAGG
 
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rJMSF015H10+          ATGGATAAGTTATGATAGTAGACTATAGTAATGGTAGTTTAAGGTTAGGAAAATAGGAAG
rJMFF005M04+          ATGGATAAGTTATGATAGTAGACTATAGTAATGGTAGTTTAAGGTTAGGAAAATAGGAAG
                      ____________________________________________________________
consensus             ATGGATAAGTTATGATAGTAGACTATAGTAATGGTAGTTTAAGGTTAGGAAAATAGGAAG
 
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rJMSF015H10+          AAATGGGTAGTTTTTGGTTTTGGTTGTTGTCAGGTTAGAGGAAAAAGAATAAAAGAAACA
rJMFF005M04+          AAATGGGTAGTTTTTGGTTTTGGTTGTTGTCAGGTTAGAGGAAAAAGAATAAAAGAAACA
                      ____________________________________________________________
consensus             AAATGGGTAGTTTTTGGTTTTGGTTGTTGTCAGGTTAGAGGAAAAAGAATAAAAGAAACA
 
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rJMSF015H10+          CAACACAACACAAAACACAGCTTTTTTGGATGATGGGTCCAATGAAGAAGTGGATTTGCA
rJMFF005M04+          CAACACAACACAAAACACAGCTTTTTTGGATGATGGGTCCAATGAAGAAGTGGATTTGCA
                      ____________________________________________________________
consensus             CAACACAACACAAAACACAGCTTTTTTGGATGATGGGTCCAATGAAGAAGTGGATTTGCA
 
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rJMSF015H10+          GTTTTCAATCTGCTCAAAACAGCAAGAATGGATGAGTGGATGTGTAATGGGAGATCTACA
rJMFF005M04+          GTTTTCAATCTGCTCAAAACAGCAAGAATGGATGAGTGGATGTGTAATGGGAGATCTACA
                      ____________________________________________________________
consensus             GTTTTCAATCTGCTCAAAACAGCAAGAATGGATGAGTGGATGTGTAATGGGAGATCTACA
 
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rJMSF015H10+          AGTTGAAAGAAGGAAGGATTGAAGATTGGGAGGAGGGTCATGTTTTGGTTTTGATCTGAC
rJMFF005M04+          AGTTGAAAGAAGGAAGGATTGAAGATTGGGAGGAGGGTCATGTTTTGGTTTTGATCTGAC
                      ____________________________________________________________
consensus             AGTTGAAAGAAGGAAGGATTGAAGATTGGGAGGAGGGTCATGTTTTGGTTTTGATCTGAC
 
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rJMSF015H10+          ACAAAACCTTTCTTTTCTTCCATCTTTTTTTTGCTTGCAATCTCCATAGTTTTGGTCATT
rJMFF005M04+          ACAAAACCTTTCTTTTCTTCCATCTTTTTTTTGCTTGCAATCTCCATAGTTTTGGTCATT
                      ____________________________________________________________
consensus             ACAAAACCTTTCTTTTCTTCCATCTTTTTTTTGCTTGCAATCTCCATAGTTTTGGTCATT
 
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rJMSF015H10+          TTACTTACAGCAATACTAGTAGAATGTATGATGGTTTGTATTAATATTAATATTATTATA
rJMFF005M04+          TTACTTACAGCAATACTAGTAGAATGTATGATGGTTTGTATTAATATTAATATTATTATA
                      ____________________________________________________________
consensus             TTACTTACAGCAATACTAGTAGAATGTATGATGGTTTGTATTAATATTAATATTATTATA
 
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rJMSF015H10+          TTAATTAATGTATTTTAACCCATCCATCCTAAAC                          
rJMFF005M04+          TTAATTAATGTATTTTAACCCATCCATCCTAAACATGGGAGGGTTGAAGAATAAGAAAGA
                      ____________________________________________________________
consensus             TTAATTAATGTATTTTAACCCATCCATCCTAAACATGGGAGGGTTGAAGAATAAGAAAGA