Contig 003939:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004E22Sequence592001631 (25)gb|KDO84876.1|5e-100hypothetical protein CISIN_1g036688mg, partial [Citrus sinensis]725003939 (13)dbj|BAJ90364.1|3e-93predicted protein [Hordeum vulgare subsp. vulgare]
JMFF008J07Sequence246003939 (13)dbj|BAJ90364.1|5e-47predicted protein [Hordeum vulgare subsp. vulgare]
JMFF013G23Sequence544001631 (25)gb|KDO84876.1|1e-86hypothetical protein CISIN_1g036688mg, partial [Citrus sinensis]731003939 (13)gb|AFY06650.1|1e-99beta-tubulin, partial [Carica papaya]
JMFF019F12Sequence590001631 (25)gb|KDO84876.1|9e-102hypothetical protein CISIN_1g036688mg, partial [Citrus sinensis]711003939 (13)gb|AFK39823.1|1e-92unknown [Lotus japonicus]
JMFF023E23Sequence500001631 (25)gb|KDO84876.1|3e-86hypothetical protein CISIN_1g036688mg, partial [Citrus sinensis]663003939 (13)gb|AFY06650.1|8e-100beta-tubulin, partial [Carica papaya]
JMFF023L17Sequence534001631 (25)gb|KDO84876.1|2e-87hypothetical protein CISIN_1g036688mg, partial [Citrus sinensis]789003939 (13)gb|AFY06650.1|4e-98beta-tubulin, partial [Carica papaya]
JMFF029P04Sequence178001631 (25)ref|XP_009764645.1|5e-16PREDICTED: tubulin beta-2 chain-like [Nicotiana sylvestris]673003939 (13)gb|AFY06650.1|2e-100beta-tubulin, partial [Carica papaya]
JMFF034E11Sequence176001631 (25)ref|XP_009764645.1|1e-13PREDICTED: tubulin beta-2 chain-like [Nicotiana sylvestris]669003939 (13)gb|AFY06650.1|5e-98beta-tubulin, partial [Carica papaya]
JMFF036D04Sequence532001631 (25)gb|KDO84876.1|3e-87hypothetical protein CISIN_1g036688mg, partial [Citrus sinensis]665003939 (13)gb|AFY06650.1|7e-97beta-tubulin, partial [Carica papaya]
JMFF045A06Sequence656001631 (25)ref|XP_009764645.1|3e-58PREDICTED: tubulin beta-2 chain-like [Nicotiana sylvestris]646003939 (13)gb|AFK39823.1|2e-87unknown [Lotus japonicus]
JMFF046F07Sequence549001631 (25)ref|XP_009764645.1|1e-61PREDICTED: tubulin beta-2 chain-like [Nicotiana sylvestris]479003939 (13)gb|AFC01190.1|6e-46beta-tubulin, partial [Ammopiptanthus mongolicus]
JMFF051L02Sequence623001631 (25)ref|XP_009764645.1|6e-78PREDICTED: tubulin beta-2 chain-like [Nicotiana sylvestris]450003939 (13)gb|ACR37087.1|2e-27unknown [Zea mays]
JMFN009D01Sequence506003939 (13)gb|AFC01190.1|2e-53beta-tubulin, partial [Ammopiptanthus mongolicus]

Alignment

This contig is upended


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rJMFF013G23+                                     ATTTGATTCCATTCCCCACGTCTTCATTTCTTC
                      ____________________________________________________________
consensus                                        ATTTGATTCCATTCCCCACGTCTTCATTTCTTC
 
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rJMFF036D04+                                          GGTCACAGCAATACATCTCTCTCACAGT
rJMFF023E23+                                     CCGTGGGTCACAGCAATACATCTCTCTCACAGT
rJMFF029P04+                                     CCGTGGGTCACAGCAATACATCTCTCTCACAGT
rJMFF013G23+          ATGGTGGGATTTGCACCACTCACCTTCCCGTGGGTCACAGCAATACATCTCTCTCACAGT
rJMFF034E11+                                        TGGGTCACAGCAATACATCTCTCTCACAGT
rJMFF019F12+                                                                   AGT
rJMFF004E22+                                                                 ACAGT
                      ____________________________________________________________
consensus             ATGGTGGGATTTGCACCACTCACCTTCCCGTGGGTCACAGCAATACATCTCTCTCACAGT
 
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rJMFF036D04+          CCCGGAACTTACTCAGCAAATGTGGGATGCCAAGAACAAGATGTGTGCAGCTGATCCTCG
rJMFF023E23+          CCCGGAACTTACTCAGCAAATGTGGGATGCCAAGAACATGATGTGTGCAGCTGATCCTCG
rJMFF029P04+          CCCGGAACTTACTCAGCAAATGTGGGATGCCAAGAACATGATGTGTGCAGCTGATCCTCG
rJMFF013G23+          CCCGGAACTTACTCAGCAAATGTGGGATGCCAAGAACATGATGTGTGCAGCTGATCCTCG
rJMFF023L17+                    ACTCAGCAAATGTGGGATGCCAAGAACAAGATGTGTGCAGCTGATCCTCG
rJMFF034E11+          CCCGGAACTTACTCAGCAAATGTGGGATGCCAAGAACATGATGTGTGCAGNTGATCCTCG
rJMFF019F12+          CCCGGAACTTACTCAGCAAATGTGGGATGCCAAGAACATGATGTGTGCAGCTGATCCTCG
rJMFF045A06+                           AAATGTGGGATGCCAAGAACATGATGTGTGCAGCTGATCCTCG
rJMFF004E22+          CCCGGAACTTACTCAGCAAATGTGGGATGCCAAGAACATGATGTGTGCAGCTGATCCTCG
                      ____________________________________________________________
consensus             CCCGGAACTTACTCAGCAAATGTGGGATGCCAAGAACATGATGTGTGCAGCTGATCCTCG
 
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rJMFF036D04+          CCATGGACGCTACCTAACAGCCTCCGCCATGTTCAGAGGTAAAATGAGCACAAAAGAAGT
rJMFF023E23+          CCATGGACGCTACCTAACAGCCTCCGCCATGTTCAGAGGTAAAATGAGCACAAAAGAAGT
rJMFF029P04+          CCATGGACGCTACCTAACAGCCTCCGCCATGTTCAGAGGTAAAATGAGCACAAAAGAAGT
rJMFF013G23+          CCATGGACGCTACCTAACAGCCTCCGCCATGTTCAGAGGTAAAATGAGCACAAAAGAAGT
rJMFF023L17+          CCATGGACGCTACCTAACAGCCTCCGCCATGTTCAGAGGTAAAATGAGCACAAAAGAAGT
rJMFF034E11+          CCATGGACGCTACCTAACAGCCTCCGCCATGTTCAGAGGTAAAATGAGCACAAAAGAAGT
rJMFF019F12+          CCATGGACGCTACCTAACAGCCTCCGCCATGTTCAGAGGTAAAATGAGCACAAAAGAAGT
rJMFF045A06+          CCATGGACGCTACCTAACAGCCTCCGCCATGTTCAGAGGTAAAATGAGCACAAAAGAAGT
rJMFF004E22+          CCATGGACGCTACCTAACAGCCTCCGCCATGTTCAGAGGTAAAATGAGCACAAAAGAAGT
                      ____________________________________________________________
consensus             CCATGGACGCTACCTAACAGCCTCCGCCATGTTCAGAGGTAAAATGAGCACAAAAGAAGT
 
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rJMFF036D04+          AGATGAACAGATGATCAATGTGCAGAACAAGAACTCGTCCTATTTCGTGGAGTGGATCCC
rJMFF023E23+          AGATGAACAGATGATCAATGTGCAGAACAAGAACTCGTCCTATTTCGTGGAGTGGATCCC
rJMFF029P04+          AGATGAACAGATGATCAATGTGCAGAACAAGAACTCGTCCTATTTCGTGGAGTGGATCCC
rJMFF013G23+          AGATGAACAGATGATCAATGTGCAGAACAAGAACTCGTCCTATTTCGTGGAGTGGATCCC
rJMFF008J07+                                                        GTGGAGTGGATCCN
rJMFF023L17+          AGATGAACAGATGATCAATGTGCAGAACAAGAACTCGTCCTATTTCGTGGAGTGGATCCC
rJMFF034E11+          AGATGAACAGATGATCAATGTGCAGAACAAGAACTCGTCCTATTTCGTGGAGTGGATCCC
rJMFF019F12+          AGATGAACAGATGATCAATGTGCAGAACAAGAACTCGTCCTATTTCGTGGAGTGGATCCC
rJMFF045A06+          AGATGAACAGATGATCAATGTGCAGAACAAGAACTCGTCCTATTTCGTGGAGTGGATCCC
JMFN009D01-                                       AAGAACTCGTCCTATTTCGTGGAGTGGATCCC
rJMFF046F07+                                                                 ATCCC
rJMFF004E22+          AGATGAACAGATGATCAATGTGCAGAACAAGAACTCGTCCTATTTCGTGGAGTGGATCCC
                      ____________________________________________________________
consensus             AGATGAACAGATGATCAATGTGCAGAACAAGAACTCGTCCTATTTCGTGGAGTGGATCCC
 
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rJMFF036D04+          TAACAACGTGAAGTCAAGCGTGTGTGATATACCACCAACCGGCCTCAAGATGGCATCAAC
rJMFF023E23+          TAACAACGTGAAGTCAAGCGTGTGTGATATACCACCAACCGGCCTCAAGATGGCATCAAC
rJMFF029P04+          TAACAACGTGAAGTCAAGCGTGTGTGATATACCACCAACCGGCCTCAAGATGGCATCAAC
rJMFF013G23+          TAACAACGTGAAGTCAAGCGTGTGTGATATACCACCAACCGGCCTCAAGATGGCATCAAC
rJMFF008J07+          TAACAACGTGAAGTCAAGCGTGTGTGATATACCACCAACCGGCCTCANGATGGCATCNAC
rJMFF023L17+          TAACAACGTGAAGTCAAGCGTGTGTGATATACCACCAACCGGCCTCAAGATGGCATCAAC
rJMFF034E11+          TAACAACGTGAAGTCAAGCGTGTGTGATATACCACCAACCGGCCTCAAGATGGCATCAAC
rJMFF019F12+          TAACAACGTGAAGTCAAGCGTGTGTGATATACCACCAACCGGCCTCAAGATGGCATCAAC
rJMFF045A06+          TAACAACGTGAAGTCAAGCGTGTGTGATATACCACCAACCGGCCTCAAGATGGCATCAAC
JMFN009D01-           TAACAACGTGAAGTCAAGCGTGTGTGATATACCACCAACCGGCCTCAAGATGGCATCAAC
rJMFF046F07+          TAACAACGTGAAGTCAAGCGTGTGTGATATACCACCAACCGGCCTCAAGATGGCATCAAC
rJMFF004E22+          TAACAACGTGAAGTCAAGCGTGTGTGATATACCACCAACCGGCCTCAAGATGGCATCAAC
                      ____________________________________________________________
consensus             TAACAACGTGAAGTCAAGCGTGTGTGATATACCACCAACCGGCCTCAAGATGGCATCAAC
 
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rJMFF036D04+          ATTCGTTGGGAATTCAACATCAATTCAAGAGATGTTTAGGCGAGTAAGCGAGCAGTTTAC
rJMFF023E23+          ATTCGTTGGGAATTCAACATCAATTCAAGAGATGTTTAGGCGAGTAAGCGAGCAGTTTAC
rJMFF029P04+          ATTCGTTGGGAATTCAACATCAATTCAAGAGATGTTTAGGCGAGTAAGCGAGCAGTTTAC
rJMFF013G23+          ATTCGTTGGGAATTCAACATCAATTCAAGAGATGTTTAGGCGAGTAAGCGAGCAGTTTAC
rJMFF008J07+          ATTNGTTGGGAATTCAACATCAATTCAAGAGATGTTTAGGCGAGTAAGCGAGCAGTNTAC
rJMFF023L17+          ATTCGTTGGGAATTCAACATCAATTCAAGAGATGTTTAGGCGAGTAAGCGAGCAGTTTAC
rJMFF034E11+          ATTCGTTGGGAATTCAACATCAATTCAAGAGATGTTTAGGCGAGTAAGCGAGCAGTTTAC
rJMFF019F12+          ATTCGTTGGGAATTCAACATCAATTCAAGAGATGTTTAGGCGAGTAAGCGAGCAGTTTAC
rJMFF045A06+          ATTCGTTGGGAATTCAACATCAATTCAAGAGATGTTTAGGCGAGTAAGCGAGCAGTTTAC
JMFN009D01-           ATTCGTTGGGAATTCAACATCAATTCAAGAGATGTTTAGGCGAGTAAGCGAGCAGTTTAC
rJMFF046F07+          ATTCGTTGGGAATTCAACATCAATTCAAGAGATGTTTAGGCGAGTAAGCGAGCAGTTTAC
rJMFF051L02+                 GGGAATTCAACATCAATTCAAGAGATGTTTAGGCGAGTAAGCGAGCAGTTTAC
rJMFF004E22+          ATTCGTTGGGAATTCAACATCAATTCAAGAGATGTTTAGGCGAGTAAGCGAGCAGTTTAC
                      ____________________________________________________________
consensus             ATTCGTTGGGAATTCAACATCAATTCAAGAGATGTTTAGGCGAGTAAGCGAGCAGTTTAC
 
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rJMFF036D04+          AGCCATGTTTAGGCGCAAGGCCTTCTTGCATTGGTACACAGGGGAAGGGATGGATGAGAT
rJMFF023E23+          AGCCATGTTTAGGCGCAAGGCCTTCTTGCATTGGTACACAGGGGAAGGGATGGATGAGAT
rJMFF029P04+          AGCCATGTTTAGGCGCAAGGCCTTCTTGCATTGGTACACAGGGGAAGGGATGGATGAGAT
rJMFF013G23+          AGCCATGTTTAGGCGCAAGGCCTTCTTGCATTGGTACACAGGGGAAGGGATGGATGAGAT
rJMFF008J07+          AGCCATGTTTAGGCGCAAGGCCTTCTTGCATTGGTACACAGGGGAAGGGATGGATGAGAT
rJMFF023L17+          AGCCATGTTTAGGCGCAAGGCCTTCTTGCATTGGTACACAGGGGAAGGGATGGATGAGAT
rJMFF034E11+          AGCCATGTTTAGGCGCAAGGCCTTCTTGCATTGGTACACAGGGGAAGGGATGGATGAGAT
rJMFF019F12+          AGCCATGTTTAGGCGCAAGGCCTTCTTGCATTGGTACACAGGGGAAGGGATGGATGAGAT
rJMFF045A06+          AGCCATGTTTAGGCGCAAGGCCTTCTTGCATTGGTACACAGGGGAAGGGATGGATGAGAT
JMFN009D01-           AGCCATGTTTAGGCGCAAGGCCTTCTTGCATTGGTACACAGGGGAAGGGATGGATGAGAT
rJMFF046F07+          AGCCATGTTTAGGCGCAAGGCCTTCTTGCATTGGTACACAGGGGAAGGGATGGATGAGAT
rJMFF051L02+          AGCCATGTTTAGGCGCAAGGCCTTCTTGCATTGGTACACAGGGGAAGGGATGGATGAGAT
rJMFF004E22+          AGCCATGTTTAGGCGCAAGGCCTTCTTGCATTGGTACACAGGGGAAGGGATGGATGAGAT
                      ____________________________________________________________
consensus             AGCCATGTTTAGGCGCAAGGCCTTCTTGCATTGGTACACAGGGGAAGGGATGGATGAGAT
 
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rJMFF036D04+          GGAGTTCACCGAAGCTGAGAGCAATATGAATGATTTAGTGGCAGAGTACCAACAATACCA
rJMFF023E23+          GGAGTTCACCGAAGCTGAGAGCAATATGAATGATTTAGTGGCAGAGTACCAACAATACCA
rJMFF029P04+          GGAGTTCACCGAAGCTGAGAGCAATATGAATGATTTAGTGGCAGAGTACCAACAATACCA
rJMFF013G23+          GGAGTTCACCGAAGCTGAGAGCAATATGAATGATTTAGTGGCAGAGTACCAACAATACCA
rJMFF008J07+          GGAGTTCACCGAAGCTGAGAGCAATATGAATGATTTAGTGGCAGAGTA            
rJMFF023L17+          GGAGTTCACCGAAGCTGAGAGCAATATGAATGATTTAGTGGCAGAGTACCAACAATACCA
rJMFF034E11+          GGAGTTCACCGAAGCTGAGAGCAATATGAATGATTTAGTGGCAGAGTACCAACAATACCA
rJMFF019F12+          GGAGTTCACCGAAGCTGAGAGCAATATGAATGATTTAGTGGCAGAGTACCAACAATACCA
rJMFF045A06+          GGAGTTCACCGAAGCTGAGAGCAATATGAATGATTTAGTGGCAGAGTACCAACAATACCA
JMFN009D01-           GGAGTTCACCGAAGCTGAGAGCAATATGAATGATTTAGTGGCAGAGTACCAACAATACCA
rJMFF046F07+          GGAGTTCACCGAAGCTGAGAGCAATATGAATGATTTAGTGGCAGAGTACCAACAATACCA
rJMFF051L02+          GGAGTTCACCGAAGCTGAGAGCAATATGAATGATTTAGTGGCAGAGTACCAACAATACCA
rJMFF004E22+          GGAGTTCACCGAAGCTGAGAGCAATATGAATGATTTAGTGGCAGAGTACCAACAATACCA
                      ____________________________________________________________
consensus             GGAGTTCACCGAAGCTGAGAGCAATATGAATGATTTAGTGGCAGAGTACCAACAATACCA
 
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rJMFF036D04+          AGATGCCACTGCAGACGACGAAGAAGAATATGAAGGAGAGGTTGGTGATCAGGAGTTCGA
rJMFF023E23+          AGATGCCACTGCAGACGACGAAGAAGAATATGAAGGAGAGGTTGGTGATCAGGAGTTCGA
rJMFF029P04+          AGATGCCACTGCAGACGACGAAGAAGAATATGAAGGAGAGGTTGGTGATCAGGAGTTCGA
rJMFF013G23+          AGATGCCACTGCAGACGACGAAGAAGAATATGAAGGAGAGGTTGGTGATCAGGAGTTCGA
rJMFF023L17+          AGATGCCACTGCAGACGACGAAGAAGAATATGAAGGAGAGGTTGGTGATCAGGAGTTCGA
rJMFF034E11+          AGATGCCACTGCAGACGACGAAGAAGAATATGAAGGAGAGGTTGGTGATCAGGAGTTCGA
rJMFF019F12+          AGATGCCACTGCAGACGACGAAGAAGAATATGAAGGAGAGGTTGGTGATCAGGAGTTCGA
rJMFF045A06+          AGATGCCACTGCAGACGACGAAGAAGAATATGAAGGAGAGGTTGGTGATCAGGAGTTCGA
JMFN009D01-           AGATGCCACTGCAGACGACGAAGAAGAATATGAAGGAGAGGTTGGTGATCAGGAGTTCGA
rJMFF046F07+          AGATGCCACTGCAGACGACGAAGAAGAATATGAAGGAGAGGTTGGTGATCAGGAGTTCGA
rJMFF051L02+          AGATGCCACTGCAGACGACGAAGAAGAATATGAAGGAGAGGTTGGTGATCAGGAGTTCGA
rJMFF004E22+          AGATGCCACTGCAGACGACGAAGAAGAATATGAAGGAGAGGTTGGTGATCAGGAGTTCGA
                      ____________________________________________________________
consensus             AGATGCCACTGCAGACGACGAAGAAGAATATGAAGGAGAGGTTGGTGATCAGGAGTTCGA
 
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rJMFF036D04+          GTGATGGCTAAGTAATGCAAACTCAGACCTGTTGTTATGTTGTTTTTATCATCTTATGCA
rJMFF023E23+          GTGATGGCTAAGTAATGCAAACTCAGACCTGTTGTTATGTTGTTTTTATCATCTTATGCA
rJMFF029P04+          GTGATGGCTAAGTAATGCAAACTCAGACCTGTTGTTATGTTG---TTATCATCTTATGCA
rJMFF013G23+          GTGATGGCTAAGTAATGCAAACTCAGACCTGTTGTTATGTTGTTTTTATCATCTTATGCA
rJMFF023L17+          GTGATGGCTAAGTAATGCAAACTCAGACCTGTTGTTATGTTGTTTTTATCATCTTATGCA
rJMFF034E11+          GTGATGGCTAAGTAATGCAAACTCAGACCTGTTGTTATGTTGTTTTTATCATCTTATGCA
rJMFF019F12+          GTGATGGCTAAGTAATGCAAACTCAGACCTGTTGTTATGTTGTTTTTATCATCTTATGCA
rJMFF045A06+          GTGATGGCTAAGTAATGCAAACTCAGACCTGTTGTTATGTTGTTTTTATCATCTTATGCA
JMFN009D01-           GTGATGGCTAAGTAATGCAAACTCAGACCTGTTGTTATGTTGTTTTTATCATCTTATGCA
rJMFF046F07+          GTGATGGCTAAGTAATGCAAACTCAGACCTGTTGTTATGTTGTTTTTATCATCTTATGCA
rJMFF051L02+          GTGATGGCTAAGTAATGCAAACTCAGACCTGTTGTTATGTTGTTTTTATCATCTTATGCA
rJMFF004E22+          GTGATGGCTAAGTAATGCAAACTCAGACCTGTTGTTATGTTGTTTTTATCATCTTATGCA
                      ____________________________________________________________
consensus             GTGATGGCTAAGTAATGCAAACTCAGACCTGTTGTTATGTTGTTTTTATCATCTTATGCA
 
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rJMFF036D04+          AAGTGAATGCTCTGCTGTTTCTTCCTTGTTAAAATTCATTTTCATTATTCTGAACTCGCA
rJMFF023E23+          AAGTGAATGCTCTGCTGTTTCTTCCTTGTTAAAATTCATTTTCATTATTCTGAACTCGCA
rJMFF029P04+          AAGTGAATGCTCTGCTGTTTCTTCCTTGTTAAAATTCATTTTCATTATTCTGAACTCGCA
rJMFF013G23+          AAGTGAATGCTCTGCTGTTTCTTCCTTGTTAAAATTCATTTTCATTATTCTGAACTCGCA
rJMFF023L17+          AAGTGAATGCTCTGCTGTTTCTTCCTTGTTAAAATTCATTTTCATTATTCTGAACTCGCA
rJMFF034E11+          AAGTGAATGCTCTGCTGTTTCTTCCTTGTTAAAATTCATTTTCATTATTCTGAACTCGCA
rJMFF019F12+          AAGTGAATGCTCTGCTGTTTCTTCCTTGTTAAAATTCATTTTCATTATTCTGAACTCGCA
rJMFF045A06+          AAGTGAATGCTCTGCTGTTTCTTCCTTGTTAAAATTCATTTTCATTATTCTGAACTCGCA
JMFN009D01-           AAGTGAATGCTCTGCTGTTTCTTCCTTGTTAAAATTCATTTTCATTATTCTGAACTCGCA
rJMFF046F07+          AAGTGAATGCTCTGCTGTTTCTTCCTTGTTAAAATTCATTTTCATTATTCTGAACTCGCA
rJMFF051L02+          AAGTGAATGCTCTGCTGTTTCTTCCTTGTTAAAATTCATTTTCATTATTCTGAACTCGCA
rJMFF004E22+          AAGTGAATGCTCTGCTGTTTCTTCCTTGTTAAAATTCATTTTCATTATTCTGAACTCGCA
                      ____________________________________________________________
consensus             AAGTGAATGCTCTGCTGTTTCTTCCTTGTTAAAATTCATTTTCATTATTCTGAACTCGCA
 
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rJMFF036D04+          TGCATATTTGTTTGTTAAATA-TTGAGCGTNGAATAAG                      
rJMFF023E23+          TGCATATTTGTTTGTTAAATATTTGAGCGT                              
rJMFF029P04+          TGCATATTTGTTTGTTAAATATTTGAGCGT                              
rJMFF013G23+          TGCATATTTGTTTGTTAAATA-TTGAGCGTNGAATAAG                      
rJMFF023L17+          TGCATATTTGTTTGTTAAATA-TTGAGCGTGGAATAAG                      
rJMFF034E11+          TGCATATTTGTTTGTTAAATA-TTGAGCGTGGAATAAG                      
rJMFF019F12+          TGCATATTTGTTTGTTAAATATTTGAGCGTTGGAATAAGAGTGTACTCCGTATTATATTG
rJMFF045A06+          TGCATATTTGTTTGTTAAATATTTGAGCGTTGGAATAA                      
JMFN009D01-           TGCATATTTGTTTGTTAAATATTTGAGCGTTGGAATAAGAGTGTACTCCGTATT      
rJMFF046F07+          TGCATATTTGTTTGTTAAATATTTGAGCGTTGGAATAAGAGTGTACTCCGTATT      
rJMFF051L02+          TGCATATTTGTTTGTTAAATATTTGAGCGTTGGAATAAGAGTGTACTCCGTATTATATTG
rJMFF004E22+          TGCATATTTGTTTGTTAAATATTTGAGCGTTGGAATAAGAGTGTACTCCGTATTATATTG
                      ____________________________________________________________
consensus             TGCATATTTGTTTGTTAAATATTTGAGCGTTGGAATAAGAGTGTACTCCGTATTATATTG
 
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rJMFF019F12+          CACTAGTTTATTTTTAATGAGTTAATTTTATCTCAAATGCAACCTTCA            
rJMFF051L02+          CA                                                          
rJMFF004E22+          CACTAGTTTATTTTTAATGAGTTAATTTTATCTCAAATGCAACCTTCAATGCAATATATA
                      ____________________________________________________________
consensus             CACTAGTTTATTTTTAATGAGTTAATTTTATCTCAAATGCAACCTTCAATGCAATATATA