| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF004E04 | Sequence | 473 | 002133 (11) | ref|XP_008222861.1| | 2e-50 | PREDICTED: UDP-glucuronate 4-epimerase 6 [Prunus mume] | 379 | 003938 (15) | |||
| JMFF006C07 | Sequence | 452 | 002133 (11) | ref|XP_008222861.1| | 8e-46 | PREDICTED: UDP-glucuronate 4-epimerase 6 [Prunus mume] | 287 | 003938 (15) | |||
| JMFF017E02 | Sequence | 504 | 002133 (11) | ref|XP_008222861.1| | 3e-58 | PREDICTED: UDP-glucuronate 4-epimerase 6 [Prunus mume] | 162 | 003938 (15) | |||
| JMFF020L18 | Sequence | 356 | 002133 (11) | ref|XP_008222861.1| | 8e-42 | PREDICTED: UDP-glucuronate 4-epimerase 6 [Prunus mume] | 201 | 003938 (15) | ref|XP_009768456.1| | 9e-22 | PREDICTED: UDP-glucuronate 4-epimerase 6-like [Nicotiana sylvestris] |
| JMFF030G24 | Sequence | 551 | 003938 (15) | ref|XP_009608204.1| | 3e-84 | PREDICTED: UDP-glucuronate 4-epimerase 6-like [Nicotiana tomentosiformis] | 128 | 003938 (15) | |||
| JMFF030P17 | Sequence | 506 | 002133 (11) | ref|XP_008222861.1| | 4e-58 | PREDICTED: UDP-glucuronate 4-epimerase 6 [Prunus mume] | 261 | 003938 (15) | |||
| JMFF051D21 | Sequence | 597 | 009280 (6) | ref|XP_011084213.1| | 2e-74 | PREDICTED: UDP-glucuronate 4-epimerase 6 [Sesamum indicum] | 467 | 003938 (15) | ref|XP_009616292.1| | 8e-55 | PREDICTED: UDP-glucuronate 4-epimerase 6-like [Nicotiana tomentosiformis] |
| JMFN015C05 | Sequence | 515 | 003938 (15) | ref|XP_009608204.1| | 3e-53 | PREDICTED: UDP-glucuronate 4-epimerase 6-like [Nicotiana tomentosiformis] | |||||
| JMFN031M24 | Sequence | 559 | 003938 (15) | ref|XP_009608204.1| | 2e-38 | PREDICTED: UDP-glucuronate 4-epimerase 6-like [Nicotiana tomentosiformis] | |||||
| JMFN034B23 | Sequence | 624 | 003938 (15) | ref|XP_009608204.1| | 1e-35 | PREDICTED: UDP-glucuronate 4-epimerase 6-like [Nicotiana tomentosiformis] | |||||
| JMFN042G18 | Sequence | 561 | 003938 (15) | ref|XP_009608204.1| | 4e-79 | PREDICTED: UDP-glucuronate 4-epimerase 6-like [Nicotiana tomentosiformis] | |||||
| JMSF011L22 | Sequence | 273 | 002133 (11) | ref|XP_008222861.1| | 5e-19 | PREDICTED: UDP-glucuronate 4-epimerase 6 [Prunus mume] | 260 | 003938 (15) | |||
| JMSF040E07 | Sequence | 720 | 002133 (11) | ref|XP_008222861.1| | 6e-107 | PREDICTED: UDP-glucuronate 4-epimerase 6 [Prunus mume] | 778 | 003938 (15) | ref|XP_009608204.1| | 2e-93 | PREDICTED: UDP-glucuronate 4-epimerase 6-like [Nicotiana tomentosiformis] |
| JMSF047P10 | Sequence | 116 | 002133 (11) | gb|KDO42082.1| | 4e-16 | hypothetical protein CISIN_1g011841mg [Citrus sinensis] | 155 | 003938 (15) | |||
This contig is upended
. : . : . : . : . : . :
rJMSF040E07+ TAAAGTCCCGTT
____________________________________________________________
consensus TAAAGTCCCGTT
. : . : . : . : . : . :
rJMSF040E07+ TTNGGAAAACCNCCGCACCGATCAACCCGCCNGCCTTTACGCCGNCACCAAAAAAGCCGG
____________________________________________________________
consensus TTNGGAAAACCNCCGCACCGATCAACCCGCCNGCCTTTACGCCGNCACCAAAAAAGCCGG
. : . : . : . : . : . :
rJMSF040E07+ CGAGGAAATCGCGCACNNTTNTAACCACATTTTCGGCCTNTCCCTAACCGGGNTGNGATT
____________________________________________________________
consensus CGAGGAAATCGCGCACNNTTNTAACCACATTTTCGGCCTNTCCCTAACCGGGNTGNGATT
. : . : . : . : . : . :
rJMSF040E07+ TTTCNCCGTTTNCGGGCCCTGGGGCCGGCCCGACNTGGGGTNTTTTTTTTTCNCCAAGGN
____________________________________________________________
consensus TTTCNCCGTTTNCGGGCCCTGGGGCCGGCCCGACNTGGGGTNTTTTTTTTTCNCCAAGGN
. : . : . : . : . : . :
JMFF030G24- TGCTCCAGGGGAAGCCGATCAACGTGTACGTCACGCAGGAGGACAAGGAGGTGGCGCG
JMFN042G18- TGCTCCAGGGGAAGCCGATCAACGTGTACGTCACGCAGGAGGACAAGGAGGTGGCGCG
rJMSF040E07+ CNTGCTCCNGGGGAAGCCGATNAACGTNTNCGTCNCGCAGGAGGACAAGGAGGTGGCGCG
____________________________________________________________
consensus CNTGCTCCAGGGGAAGCCGATCAACGTGTACGTCACGCAGGAGGACAAGGAGGTGGCGCG
. : . : . : . : . : . :
JMFF030G24- TGACTTCACGTACATCGACGACGTCGTGAAGGGGTGCGTGGGGGCGCTGGACACGGCGGA
rJMFF020L18+ CGTGGGGGCNCTNGACCCNGCGGA
JMFN042G18- TGACTTCACGTACATCGACGACGTCGTGAAGGGGTGCGTGGGGGCGCTGGACACGGCGGA
rJMSF040E07+ TGACTTCACGTACATTGACGACGTNGTGAAGGGGTGCGTGGGGGCGCTGGACNCGGCGGA
JMFN015C05- GGCGCTGGACACGGCGGA
____________________________________________________________
consensus TGACTTCACGTACATCGACGACGTCGTGAAGGGGTGCGTGGGGGCGCTGGACACGGCGGA
. : . : . : . : . : . :
JMFF030G24- GAAGAGCACCGGCAGCGGCGGGAAGAAGAAAGGGCCGGCGCAGTTGAGGGTGTACAACCT
rJMFF020L18+ GAAGAGCCCCGGCANCGGNGGGAANAANAAAGGGCCGGCNCANTTGAGGGTGTNCAACCT
JMFN042G18- GAAGAGCACCGGCAGCGGCGGGAAGAAGAAAGGGCCGGCGCAGTTGAGGGTGTACAACCT
rJMSF040E07+ GAAGAGCNCCGGCAGCGGCGGGAAGAAGAAAGGGCCGGCGCAGTTGAGGGTGTNCAACCT
rJMFF051D21+ AAGAAGAAGGGGCCGGCGCAGTTGAGGGTGTACAACCT
JMFN015C05- GAAGAGCACCGGCAGCGGCGGGAAGAAGAAAGGGCCGGCGCAGTTGAGGGTGTACAACCT
____________________________________________________________
consensus GAAGAGCACCGGCAGCGGCGGGAAGAAGAAAGGGCCGGCGCAGTTGAGGGTGTACAACCT
. : . : . : . : . : . :
JMFF030G24- GGGGAACACGTCGCCGGTGTCGGTGAGGAAGCTGGTGTCGATTCTTGAAAATCTGTTGAG
rJMFF020L18+ GGGGAACNCGTNGCCGGTGTNGGTGAGGAANCTGGTGTTGATTTTTGAAAATTTGTTGAN
JMFN042G18- GGGGAACACGTCGCCGGTGTCGGTGAGGAAGCTGGTGTCGATTCTTGAAAATCTGTTGAG
rJMSF040E07+ GGGGAACACGTNGCCGGNGTCGGTGAGGAAGCTGGTGTCGATTCTTGAAAATNTGTTGAG
rJMFF051D21+ GGGTAACACGTCGCCAGTGTCGGTGAGGAAGCTAGTGGCAATTCTAGAAAATTTGCTCAA
JMFN015C05- GGGGAACACGTCGCCGGTGTCGGTGAGGAAGCTGGTGTCGATTCTTGAAAATCTGTTGAG
JMFN031M24- TCGGTGAGGAAGCTGGTGTCGATTCTTGAAAATCTGTTGAG
JMFN034B23- CTGGTGTCGATTCTTGAAAATCTGTTGAG
____________________________________________________________
consensus GGGGAACACGTCGCCGGTGTCGGTGAGGAAGCTGGTGTCGATTCTTGAAAATCTGTTGAG
. : . : . : . : . : . :
JMFF030G24- CATCAAGGCTAAAAAGAACGTGGTCAAGATGCCCCGAAACGGCGACGTTCCGTTCACCCA
rJMFF020L18+ CATCAAGGGTAAAAAGAACGTGGTCAAGATNCCCCGAAACGGNGACGTTCCGTT
JMFN042G18- CATCAAGGCTAAAAAGAACGTGGTCAAGATGCCCCGAAACGGCGACGTTCCGTTCACCCA
rJMSF040E07+ CATCAAGGNTAAAAAGAACGTGGTCAAGATGCCCCGAAACGGNGACGTTCCGTTCNCCCN
rJMFF051D21+ CATCAAGGCTAAAAAGAACGTTGTAAAGATGCCCCGAAACGGCGACGTTCCGTACACCCA
JMFN015C05- CATCAAGGCTAAAAAGAACGTGGTCAAGATGCCCCGAAACGGCGACGTTCCGTTCACCCA
JMFN031M24- CATCAAGGCTAAAAAGAACGTGGTCAAGATGCCCCGAAACGGCGACGTTCCGTTCACCCA
JMFN034B23- CATCAAGGCTAAAAAGAACGTGGTCAAGATGCCCCGAAACGGCGACGTTCCGTTCACCCA
____________________________________________________________
consensus CATCAAGGCTAAAAAGAACGTGGTCAAGATGCCCCGAAACGGCGACGTTCCGTTCACCCA
. : . : . : . : . : . :
JMFF030G24- TGCTAACGTGAGCCTGGCGTACAAGGACTTCGGGTACAAACCCACCACGGATCTTTCATC
JMFN042G18- TGCTAACGTGAGCCTGGCGTACAAGGACTTCGGGTACAAACCCACCACGGATCTTTCATC
rJMSF040E07+ TGCTAACGTGAGCCTGGNGTACAAGGACTTNGGGTACAAACCCCCCNCGGATNTTTCATC
rJMFF051D21+ CGCTAACGTGAGCCTTGCCTACAGGGACTTCGGCTACAAACCAACCACGGACTTGTCAAG
JMFN015C05- TGCTAACGTGAGCCTGGCGTACAAGGACTTCGGGTACAAACCCACCACGGATCTTTCATC
JMFN031M24- TGCTAACGTGAGCCTGGCGTACAAGGACTTCGGGTACAAACCCACCACGGATCTTTCATC
JMFN034B23- TGCTAACGTGAGCCTGGCGTACAAGGACTTCGGGTACAAACCCACCACGGATCTTTCATC
____________________________________________________________
consensus TGCTAACGTGAGCCTGGCGTACAAGGACTTCGGGTACAAACCCACCACGGATCTTTCATC
. : . : . : . : . : . :
JMFF030G24- CGGGTTAAGAAAATTCGTCAAGTGGTACGTTAGTTATTACGGGATACAATCAAGGGTAAA
JMFN042G18- CGGGTTAAGAAAATTCGTCAAGTGGTACGTTAGTTATTACGGGATACAATCAAGGGTAAA
rJMSF040E07+ CGGGTTAAGAAAATTNGTCAAGTGGTACGTTAGTTNTTNCGGGATNCAATCAAGGGTAAA
rJMFF051D21+ TGGATTGAGAAAGTTCGTCAAGTGGTACGTTAGTTATTACGGTATTCAATCAAGGGTAAA
JMFN015C05- CGGGTTAAGAAAATTCGTCAAGTGGTACGTTAGTTATTACGGGATACAATCAAGGGTAAA
JMFN031M24- CGGGTTAAGAAAATTCGTCAAGTGGTACGTTAGTTATTACGGGATACAATCAAGGGTAAA
JMFN034B23- CGGGTTAAGAAAATTCGTCAAGTGGTACGTTAGTTATTACGGGATACAATCAAGGGTAAA
____________________________________________________________
consensus CGGGTTAAGAAAATTCGTCAAGTGGTACGTTAGTTATTACGGGATACAATCAAGGGTAAA
. : . : . : . : . : . :
JMFF030G24- AACGGAATTACACCCTACCCATCAGTCCGATGATTAAGCTGTGGGGCCCAACAACAAGCG
JMFN042G18- AACGGAATTACACCCTACCCATCAGTCCGATGATTAAGCTGTGGGGCCCAACAACAAGCG
rJMSF040E07+ AACGGAATTACCCCCTNCCCNTCAGTCCGATGATTAAGCTGNGGGGCCCAACAACAAGCG
rJMFF051D21+ AAAGGAATTA
JMFN015C05- AACGGAATTACACCCTACCCATCAGTCCGATGATTAAGCTGTGGGGCCCAACAACAAGCG
JMFN031M24- AACGGAATTACACCCTACCCATCAGTCCGATGATTAAGCTGTGGGGCCCAACAACAAGCG
JMFN034B23- AACGGAATTACACCCTACCCATCAGTCCGATGATTAAGCTGTGGGGCCCAACAACAAGCG
____________________________________________________________
consensus AACGGAATTACACCCTACCCATCAGTCCGATGATTAAGCTGTGGGGCCCAACAACAAGCG
. : . : . : . : . : . :
JMFF030G24- GTGCTGCCTTTCTGGCTTTCTTTCCTTTTTTTTTT
JMFN042G18- GTGCTGCCTTTCTGGCTTTCTTTCCTTTTTTTTTTTTATAACTTATTTTTCCCA-CTCAA
rJMSF040E07+ GNGCTGCCTTTCTGGCTTTNTTTCCTTTTTTTTTTTTATAACTTATTTTTCCCATCTCAA
JMFN015C05- GTGCTGCCTTTCTGGCTTTCTTTCC-TTTTTTTTTTTATAACTTATTTTTCCCA-CTCAA
rJMFF030P17+ TTTTTTTTTTTATAACTTATTTTTCCCC-CTCAA
rJMFF006C07+ TTTTTTTTTTTANAACTTATTTTTCCCC-CTCAA
JMFN031M24- GTGCTGCCTTTCTGGCTTTCTTTCCTTTTTTTTTTTTATAACTTATTTTTCCCA-CTCAA
rJMSF011L22+ TTTTTTTTTTATAACTTATTTTTCCCC-CTCAA
rJMFF017E02+ TATTTTTCCCC-CTCAA
JMFN034B23- GTGCTGCCTTTCTGGCTTTCTTTCCTTTTTTTTTTTTATAACTTATTTTTCCCA-CTCAA
rJMFF004E04+ TTTTTTTTTTTANAANTTATTTTTNCCN-CTCAA
____________________________________________________________
consensus GTGCTGCCTTTCTGGCTTTCTTTCCTTTTTTTTTTTTATAACTTATTTTTCCCA-CTCAA
. : . : . : . : . : . :
JMFN042G18- ATATAATATATTTAT
rJMSF040E07+ ATATAATATATTTATTTAAAATTAC
JMFN015C05- ATATAATATATTTATTTAAAATTACTGTTCATGTATTTTGAATCTTATAGGGATAGATAG
rJMFF030P17+ ATATAATATNTTTATTTAAAATTACTGTTCATGTNTTTTGAATTTTNTAGGGATAGATNG
rJMFF006C07+ ATNTAATNTNTTTNTTTAAAATTNCTGTTCANGTNTTTTGAATTTTNTNGGGATNGATNG
JMFN031M24- ATATAATATATTTATTTAAAATTACTGTTCATGTATTTTGAATCTTATAGGGATAGATGG
rJMSF011L22+ ATNTAATATATTTNTTTAAAATTNCNGTTCNTGTATTTTGAATNTTATAGGGNTAGNTAG
rJMFF017E02+ ANATNATATATTTATTTAAAATTNCTGTTCANGTATTTTGAATTTTATAGGGATAGATAG
JMFN034B23- ATATAATATATTTATTTAAAATTACTGTTCATGTATTTTGAATCTTATAGGGATAGATAG
rJMFF030G24+ GGATAGATAG
rJMFF004E04+ ATNTAATATNTTTATTTAAAATTNCTGTTCANGTATTTTGAATTTTATAGGGATAGATAG
____________________________________________________________
consensus ATATAATATATTTATTTAAAATTACTGTTCATGTATTTTGAATTTTATAGGGATAGATAG
. : . : . : . : . : . :
JMFN015C05- AATTTTATGTACAAAAAGT
rJMFF030P17+ AATTTTATGTCCAAAAAGTAAAAAAAAAAAATGGCATATCATATAAAGTAAGAAATATGA
rJMFF006C07+ AATTTTNTGTTCAAAAAGTNAAAAAAAAAAATGGCATATCATATAAAGTAAGAAATATGA
JMFN031M24- AATTTTATGTACAAAAAGTAAAAAAAAAAAATGGCATATCATATAAAGTAAGAAATATGA
rJMSF011L22+ AATTTTNTGTNCNAAAAGTAAAAAAAAAAAATGGCATATCATATAAAGTAAGAAATATGA
rJMFF017E02+ AATTTTATGTNCAAAAAGTAAAAAAAAAAAATGGCATATCATATAAAGTAAGAAATATGA
rJMSF047P10+ AAAAAAAAAAATGGCATATCATATAAAGTAAGAAATATGA
JMFN034B23- AATTTTATGTACAAAAAGTAAAAAAAAAAAATGGCATATCATATAAAGTAAGAAATATGA
rJMFF030G24+ AATTTTATGTNCAAAAAGTAAAAAAAAAAAATGGCATATCATATAAAGTAAGAAATATGA
rJMFF004E04+ AATTTTATGTNCAAAAAGTAAAAAAAAAAAATGGCATATCATATAAAGTAAGAAATATGA
____________________________________________________________
consensus AATTTTATGTACAAAAAGTAAAAAAAAAAAATGGCATATCATATAAAGTAAGAAATATGA
. : . : . : . : . : . :
rJMFF030P17+ GAAGGAAAGGGGGA-GCAAGTGTAGATTTGAAAAGTGGAGTGGCAAATAANGTGAAAACA
rJMFF006C07+ GAAGGAAAGGGGGA-GCAAGTGTAGATTTGAAAAGTGGAGTGGCAAATAATGTGAAAACA
JMFN031M24- GAAGGAAAGGGGGA-GCAAGTGTAGATTTGAAAAGTGGAGTGGCAAATAATGTGAAAACA
rJMSF011L22+ GAAGGAAAGGGGGA-GCAAGTGTAGATTTGAAAAGTGGAGTGGCAAATAATGTGAAAACA
rJMFF017E02+ GAAGGAAAGGGGCA-GCAAGTGTAGAT
rJMSF047P10+ GAAGGAAAGGGGGATGCAANTGTAGATTTGAAAAGTGGAGTGGCAAATAATGTGAAAACA
JMFN034B23- GAAGGAAAGGGGGA-GCAAGTGTAGATTTGAAAAGTGGAGTGGCAAATAATGTGAAAACA
rJMFF030G24+ GAAGGAAAGGGGGA-GCAAGTGTAGATTTGAAAAGTGGAGTGGCAAATAATGTGAAAAC
rJMFF004E04+ GAAGGAAAGGGGGA-GCAAGTGTAGATTTGAAAAGTGGAGTGGCAAATAATGTGAAAACA
____________________________________________________________
consensus GAAGGAAAGGGGGA-GCAAGTGTAGATTTGAAAAGTGGAGTGGCAAATAATGTGAAAACA
. : . : . : . : . : . :
rJMFF030P17+ CCT
rJMFF006C07+ CCTTANATGCAGGGGTGTAATGGTAATT
JMFN031M24- CCTTAAATGCAGGGGTGTAATGGTAATTTCAATTATACAT
rJMSF011L22+ CCT
rJMSF047P10+ CCT
JMFN034B23- CCTTAAATGCAGGGGTGTAATGGTAATTTCAATTATACATAAATTTCTCATCTAAATGTT
rJMFF004E04+ CCTTAAATGCAGGGGTGTAATGGTAATTTCAATTATACATAAATTTCTCATCTAAATGTT
____________________________________________________________
consensus CCTTAAATGCAGGGGTGTAATGGTAATTTCAATTATACATAAATTTCTCATCTAAATGTT
. : . : . : . : . : . :
JMFN034B23- TGTAAGTTTCCTTTTGGTACAACAATGATTCTTCTCCCAATGTATTGCTACTTCATT
rJMFF004E04+ TGTAAGTTTCCTTTTGGTACAACAATGATTCTTCTCCCAATGTATTGCTACTTCATTATT
____________________________________________________________
consensus TGTAAGTTTCCTTTTGGTACAACAATGATTCTTCTCCCAATGTATTGCTACTTCATTATT