Contig 003928:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001B19Sequence575003928 (15)ref|XP_004290838.1|8e-23PREDICTED: selenoprotein K [Fragaria vesca subsp. vesca]
JMFF029B15Sequence371003928 (15)ref|XP_004290838.1|3e-34PREDICTED: selenoprotein K [Fragaria vesca subsp. vesca]641003928 (15)ref|XP_004290838.1|2e-33PREDICTED: selenoprotein K [Fragaria vesca subsp. vesca]
JMFF035D24Sequence444003928 (15)ref|XP_004290838.1|5e-34PREDICTED: selenoprotein K [Fragaria vesca subsp. vesca]556003928 (15)ref|XP_004290838.1|1e-33PREDICTED: selenoprotein K [Fragaria vesca subsp. vesca]
JMFF037L22Sequence595003928 (15)ref|XP_004290838.1|1e-33PREDICTED: selenoprotein K [Fragaria vesca subsp. vesca]
JMFN003N08Sequence591003928 (15)ref|XP_004290838.1|1e-33PREDICTED: selenoprotein K [Fragaria vesca subsp. vesca]
JMFN018M11Sequence606003928 (15)ref|XP_004290838.1|2e-33PREDICTED: selenoprotein K [Fragaria vesca subsp. vesca]
JMFN034J07Sequence594003928 (15)ref|XP_004290838.1|1e-32PREDICTED: selenoprotein K [Fragaria vesca subsp. vesca]
JMFN034L20Sequence614003928 (15)ref|XP_004290838.1|2e-33PREDICTED: selenoprotein K [Fragaria vesca subsp. vesca]
JMFN038D08Sequence575003928 (15)ref|XP_004290838.1|3e-32PREDICTED: selenoprotein K [Fragaria vesca subsp. vesca]
JMFN039H11Sequence581003928 (15)ref|XP_004290838.1|3e-27PREDICTED: selenoprotein K [Fragaria vesca subsp. vesca]
JMFN042K02Sequence591003928 (15)ref|XP_004290838.1|1e-33PREDICTED: selenoprotein K [Fragaria vesca subsp. vesca]
JMSF004A15Sequence270003928 (15)ref|XP_007018994.1|5e-18Glycine-rich protein [Theobroma cacao] gb|EOY16219.1| Glycine-rich protein [Theo239003928 (15)

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN039H11- CACATACAAATATAACTTTGA
JMFN034L20+ TGA
rJMFF029B15- TGA
                      ____________________________________________________________
consensus CACATACAAATATAACTTTGA
 
. : . : . : . : . : . :
JMFN039H11- TTATCTTATATAACTTGAATTACACGCCCGCTAAATGTACTTTAGGATAACTTTGCATCG
JMFN018M11+ AATTACACGCCCGCTAAATGTACTTTAGGATAACTTTGCATCG
JMFN042K02+ ACACGCCCGCTAAATGTACTTTAGGATAACTTTGCATCG
JMFN038D08+ CGCCCGCTAAATGTACTTTAGGATAACTTTGCATCG
JMFN003N08+ ACACGCCCGCTAAATGTACTTTAGGATAACTTTGCATCG
JMFN034J07+ CGCCCGCTAAATGTACTTTAGGATAACTTTGCATCG
JMFN034L20+ TTATCTTATATAACTGAAATTACACGCCCGCTAAATGTACTNTAGGATAACTTTGCATCG
JMFF037L22+ CTTTAGGATAACTTTGCATNG
rJMFF029B15- TTATCTTATATAACTTGAATTACACGCCCGCTAAATGTACTTTAGGATAACTTTGCATCG
                      ____________________________________________________________
consensus TTATCTTATATAACTTGAATTACACGCCCGCTAAATGTACTTTAGGATAACTTTGCATCG
 
. : . : . : . : . : . :
JMFN039H11- ACTAATATACATGATCAGTTTTTATTCTTGAGAAAATTGAGAGGTCAAAGTTGAAGAAAA
JMFN018M11+ ACTAATATACATGATCAGTTTTTATTCTTGAGAAAATTGAGAGGTCAAAGTTGAAGAAAA
JMFN042K02+ ACTAATATACATGATCAGTTTTTATTCTTGAGAAAATTGAGAGGTCAAAGTTGAAGAAAA
JMFN038D08+ ACTAATATACATGATCAGTTTTTATTCTTGAGAAAATTGAGAGGTCAAGGTTGAAGAAAA
JMFN003N08+ ACTAATATACATGATCAGTTTTTATTCTTGAGAAAATTGAGAGGTCAAAGTTGAAGAAAA
JMFN034J07+ ACTAATATACATGATCAGTTTTTATTCTTGAGAAAATTGAGAGGTCAAAGTTGAAGAAAA
JMFN034L20+ ACTAATATACATGATCAGTTTTTATTCTTGAGAAAATTGAGAGGTCAAAGTTGAAGAAAA
JMFF037L22+ ANTAATATACATGATCAGTTTTTATTCTNGAGAAAATNGAGAGGTCAAAGTTGAAGAAAA
rJMFF035D24- TTTTTATTCTTGAGAAAATTGAGAGGTCAAAGTTGAAGAAAA
rJMFF029B15- ACTAATATACATGATCAGTTTTTATTCTTGAGAAAATTGAGAGGTCAAAGTTGAAGAAAA
rJMFF001B19- AAATTGAGAGGTCAAAGTTGAAGAAAA
                      ____________________________________________________________
consensus ACTAATATACATGATCAGTTTTTATTCTTGAGAAAATTGAGAGGTCAAAGTTGAAGAAAA
 
. : . : . : . : . : . :
JMFN039H11- TACATTTAGAAATACCCAAAACAAGGACAGCCATTTATATAAGGAAATAGGATAAATAGA
JMFN018M11+ TACATTTAGAAATACCCAAAACAAGGACAGCCATTTATATAAGGAAATAGGATAAATAGA
JMFN042K02+ TACATTTAGAAATACCCAAAACAAGGACAGCCATTTATATAAGGAAATAGGATAAATAGA
JMFN038D08+ TACATTTAGAAATACCCAAAACAAGGACAGCCATTTATATAAGGAAATAGGATAAATAGA
JMFN003N08+ TACATTTAGAAATACCCAAAACAAGGACAGCCATTTATATAAGGAAATAGGATAAATAGA
JMFN034J07+ TACATTTAGAAATACCCAAAACAAGGACAGCCATTTATATAAGGAAATAGGATAAATAGA
JMFN034L20+ TACATTTAGAAATACCCAAAACAAGGACAGCCATTTATATAAGGAAATAGGATAAATAGA
JMFF037L22+ TACATTTAGAAATACCCAAAACAAGGACAGCCATTTATATAAGGAAATAGGATAAATAGA
rJMFF035D24- TACATTTAGAANTACCCAAAACAAGGACAGCCATTTATATAAGGAAATAGGATAAATAGA
rJMFF029B15- TACATTTAGAAATACCCAAAACAAGGACAGCCATTTATATAAGGAAATAGGATAAATAGA
rJMSF004A15- CAGCCANTTATATCANGAAANAGGATAAATAGN
rJMFF001B19- TACATTTAGAAATACCCAAAACAAGGACAGCCATTTATATAAGGAAATAGGATAAATAGA
                      ____________________________________________________________
consensus TACATTTAGAAATACCCAAAACAAGGACAGCCATTTATATAAGGAAATAGGATAAATAGA
 
. : . : . : . : . : . :
JMFN039H11- TAGGGACTTTGTATTAGTGTGAAACATATATACTATAGTTTTTAATTTCCAAAAGCAAGC
JMFN018M11+ TAGGGACTTTGTATTAGTGTGAAACATATATACTATAGTTTTTAATTTCCAAAAGCAAGC
JMFN042K02+ TAGGGACTTTGTATTAGTGTGAAACATATATACTATAGTTTTTAATTTCCAAAAGCAAGC
JMFN038D08+ TAGGGACTTTGTATTAGTGTGAAACATATATACTATAGTTTTTAATTTCCAAAAGCAAGC
JMFN003N08+ TAGGGACTTTGTATTAGTGTGAAACATATATACTATAGTTTTTAATTTCCAAAAGCAAGC
JMFN034J07+ TAGGGACTTTGTATTAGTGTGAAACATATATACTATAGTTTTTAATTTCCAAAAGCAAGC
JMFN034L20+ TAGGGACTTTGTATTAGTGTGAAACATATATACTATAGTTTTTAATTTCCAAAAGCAAGC
JMFF037L22+ TAGGGACTTTGTATTAGTGTGAAACATATATACTATAGTTTTTAATTTCCAAAAGCAAGC
rJMFF035D24- TAGGGACTTTGTATTAGTGTGAAACATATATACTATAGTTTTTAATTTCCAAAAGCAAGC
rJMFF029B15- TAGGGACTTTGTATTAGTGTGAAACATATATACTATAGTTTTTAATTTCCAAAAGCAAGC
JMFF035D24+ GTATTAGTGTGAAACATATATACTATAGTTTTTAATTTCCAAAAGCAAGC
rJMSF004A15- TNGGGACTTTGTATTAGTGTGANACATANATACTATAGTTTTTANTTTCCNAANGCNNGC
rJMFF001B19- TAGGGACTTTGTATTAGTGTGAAACATATATACTATAGTTTTTAATTTCCAAAAGCAAGC
                      ____________________________________________________________
consensus TAGGGACTTTGTATTAGTGTGAAACATATATACTATAGTTTTTAATTTCCAAAAGCAAGC
 
. : . : . : . : . : . :
JMFN039H11- ACTCGGAATATTGAAATTTTGCATCGCTAGTGCTTAACCACCACAGCAGGAGCCACAAGC
JMFN018M11+ ACTCGGAATATTGAAATTTTGCATCGCTAGTGCTTAACCACCACAGCAGGAGCCACAAGC
JMFN042K02+ ACTCGGAATATTGAAATTTTGCATCGCTAGTGCTTAACCACCACAGCAGGAGCCACAAGC
JMFN038D08+ ACTCGGAATATTGAAATTTTGCATCGCTAGTGCTTAACCACCACAGCAGGAGCCACAAGC
JMFN003N08+ ACTCGGAATATTGAAATTTTGCATCGCTAGTGCTTAACCACCACAGCAGGAGCCACAAGC
JMFN034J07+ ACTCGGAATATTGAAATTTTGCATCGCTAGTGCTTAACCACCACAGCAGGAGCCACAAGC
JMFN034L20+ ACTCGGAATATTGAAATTTTGCATCGCTAGTGCTTAACCACCACAGCAGGAGCCACAAGC
JMFF037L22+ ACTCGGAATATTGAAATTTTGCATCGCTAGTGCTTAACCACCACAGCAGGAGCCACAAGC
rJMFF035D24- ACTCGGAATATTGAAATTTTGCATCGCTAGTGCTTAACCACCACAGCAGGAGCCACAAGC
rJMFF029B15- ACTCGGAATATTGAAATTTTGCATCGCTAGTGCTTAACCACCACAGCAGGAGCCACAAGC
JMFF035D24+ ACTCGGAATATTGAAATTTTGCATCGCTAGTGCTTAACCACCACAGCAGGAGCCACAAGC
JMFF029B15+ TCGCTAGTGCTTAACCACCACAGCAGGAGCCACAAGC
rJMSF004A15- ACTCGGAATATTGAAATTTTGCATCGCTAGTGCTTAACCACCACNGNAGGAGCCACANGC
rJMFF001B19- ACTCGGAATATTGAAATTTTGCATCGCTAGTGCTTAACCACCACAGCAGGAGCCACAAGC
                      ____________________________________________________________
consensus ACTCGGAATATTGAAATTTTGCATCGCTAGTGCTTAACCACCACAGCAGGAGCCACAAGC
 
. : . : . : . : . : . :
JMFN039H11- AGGGAGAGAGCTATGGTCAATGCCTCTAACATTATCTAATCCACGTGGCCGTCCACCTGG
JMFN018M11+ AGGGAGAGAGCTATGGTCAATGCCTCTAACATTATCTAATCCACGTGGCCGTCCACCTGG
JMFN042K02+ AGGGAGAGAGCTATGGTCAATGCCTCTAACATTATCTAATCCACGTGGCCGTCCACCTGG
JMFN038D08+ AGGGAGAGAGCTATGGTCAATGCCTCTAACATTATCTAATCCACGTGGCCGTCCACCTGG
JMFN003N08+ AGGGAGAGAGCTATGGTCAATGCCTCTAACATTATCTAATCCACGTGGCCGTCCACCTGG
JMFN034J07+ AGGGAGAGAGCTATGGTCAATGCCTCTAACATTATCTAATCCACGTGGCCGTCCACCTGG
JMFN034L20+ AGGGAGAGAGCTATGGTCAATGCCTCTAACATTATCTAATCCACGTGGCCGTCCACCTGG
JMFF037L22+ AGGGAGAGAGCTATGGTCAATGCCTCTAACATTATCTAATCCACGTGGCCGTCCACCTGG
rJMFF035D24- AGGGAGAGAGCTATGGTCAATGCCTCTAACATTATCTAATCCACGTGGCCGTCCACCTGG
rJMFF029B15- AGGGAGAGAGCTATGGTCAATGCCTCTAACATTATCTAATCCACGTGGCCGTCCACCTGG
JMFF035D24+ AGGGAGAGAGCTATGGTCAATGCCTCTAACATTATCTAATCCACGTGGCCGTCCACCTGG
JMFF029B15+ AGGGAGAGAGCTATGGTCAATGCCTCTAACATTATCTAATCCACGTGGCCGTCCACCTGG
rJMSF004A15- AGGGAGAGAGCTATGGNCAATGCCTCTAACATTATCTAATCCNCGTGGCCGTCCANCTGG
rJMFF001B19- AGGGAGAGAGCTATGGTCAATGCCTCTAACATTATCTAATCCACGTGGCCGTCCACCTGG
                      ____________________________________________________________
consensus AGGGAGAGAGCTATGGTCAATGCCTCTAACATTATCTAATCCACGTGGCCGTCCACCTGG
 
. : . : . : . : . : . :
JMFN039H11- ACCACCACCATAGGGACCACTTCCAGGACCTCCAGGGCCACCACCATCCCACTTCTTGCT
JMFN018M11+ ACCACCACCATAGGGACCACTTCCAGGACCTCCAGGGCCACCACCATCCCACTTCTTGCT
JMFN042K02+ ACCACCACCATAGGGACCACTTCCAGGACCTCCAGGGCCACCACCATCCCACTTCTTGCT
JMFN038D08+ ACCACCACCATAGGGACCACTTCCAGGACCTCCAGGGCCACCACCATCCCACTTCTTGCT
JMFN003N08+ ACCACCACCATAGGGACCACTTCCAGGACCTCCAGGGCCACCACCATCCCACTTCTTGCT
JMFN034J07+ ACCACCACCATAGGGACCACTTCCAGGACCTCCAGGGCCATCACCATCCCACTTCTTGCT
JMFN034L20+ ACCACCACCATAGGGACCACTTCCAGGACCTCCAGGGCCACCACCATCCCACTTCTTGCT
JMFF037L22+ ACCACCACCATAGGGACCACTTCCAGGACCTCCAGGGCCACCACCATCCCACTTCTTGCT
rJMFF035D24- ACCACCACCATAGGGACCACTTCCAGGACCTCCAGGGCCACCACCATCCCACTTCTTGCT
rJMFF029B15- ACCACCACCATAGGGACCACTTCCAGGACCTCCAGGGCCACCACCATCCCACTTCTTGCT
JMFF035D24+ ACCACCACCATAGGGACCACTTCCAGGACCTCCAGGGCCACCACCATCCCACTTCTTGCT
JMFF029B15+ ACCACCACCATAGGGACCACTTCCAGGACCTCCAGGGCCACCACCATCCCACTTCTTGCT
JMSF004A15+ CCACCATAGGGACCACTTCCAGGACCTCCAGGGCCACCACCATCCCACTTCTTGCT
rJMSF004A15- ACCACCACCATAGGGACNACTTC
rJMFF001B19- ACCACCACCATAGGGACCACTTCCAGGACCTCCAGGGCCACCACCATCCCACTTCTTGCT
                      ____________________________________________________________
consensus ACCACCACCATAGGGACCACTTCCAGGACCTCCAGGGCCACCACCATCCCACTTCTTGCT
 
. : . : . : . : . : . :
JMFN039H11- AGACCCAGTCCCCTTCCGATAAGCATCAGACTTTTCCATCGAAAACAAAGTAGC-AAAAA
JMFN018M11+ AGACCCAGTCCCCTTCCGATAAGCATCAGACTTTTCCATCGAAAACAAAGTAGC-AAAAA
JMFN042K02+ AGACCCAGTCCCCTTCCGATAAGCATCAGACTTTTCCATCGAAAACAAAGTAGC-AAAAA
JMFN038D08+ AGACCCAGTCCCCTTCCGATAAGCATCAGACTTTTCCATCGAAAACAAAGTAGC-AAAAA
JMFN003N08+ AGACCCAGTCCCCTTCCGATAAGCATCAGACTTTTCCATCGAAAACAAAGTAGC-AAAAA
JMFN034J07+ AGACCCAGTCCCCTTCCGATAAGCATCAGACTTTTCCATCGAAAACAAAGTAGC-AAAAA
JMFN034L20+ AGACCCAGTCCCCTTCCGATAAGCATCAGACTTTTCCATCGAAAACAAAGTAGC-AAAAA
JMFF037L22+ AGACCCAGTCCCCTTCCGATAAGCATCAGACTTTTCCATCGAAAACAAAGTAGC-AAAAA
rJMFF035D24- AGACCCAGTCCCCTTCCGATAAGCATCAGACTTTTCCATCGAAAACAAAGTAGC-AAAAA
rJMFF029B15- AGACCCAGTCCCCTTCCGATAAGCATCAGACTTTTCCATCGAAAACAAAGTAGC-AAAAA
JMFF035D24+ AGACCCAGTCCCCTTCCGATAAGCATCAGACTTTTCCATCGAAAACAAAGTAGC-AAAAA
JMFF029B15+ AGACCCAGTCCCCTTCCGATAAGCATCAGACTTTTCCATCGAAAACAAAGTAGC-AAAAA
JMSF004A15+ AGACCCAGTCCCCTTCCGATAAGCATCAGACTTTTCCATCGAAAACAAAGTAGC--AAAA
rJMFF001B19- AGACCCAGTCCCCTCCCGATAAGCATCAGACTTTTCCATCGAAAACAAAGTAGCAAAAAA
                      ____________________________________________________________
consensus AGACCCAGTCCCCTTCCGATAAGCATCAGACTTTTCCATCGAAAACAAAGTAGC-AAAAA
 
. : . : . : . : . : . :
JMFN039H11- ACACGCCTATAAAGTTGATGATTGCCCAAAAGAAATCAGTGATTGTTTTCAAACGCCATA
JMFN018M11+ ACACGCCTATAAAGTTGATGATTGCCCAAAAGAAATCAGTGATTGTTTTCAAACGCCATA
JMFN042K02+ ACACGCCTATAAAGTTGATGATTGCCCAAAAGAAATCAGTGATTGTTTTCAAACGCCATA
JMFN038D08+ ACACGCCTATAAAGTTGATGATTGCCAAAAAGAAATCAGTGATTGTTTTCAAACGCCATA
JMFN003N08+ ACACGCCTATAAAGTTGATGATTGCCCAAAAGAAATCAGTGATTGTTTTCAAACGCCATA
JMFN034J07+ ACACGCCTATAAAGTTGATGATTGCCCAAAAGAAATCAGTGATTGTTTTCAAACGCCATA
JMFN034L20+ ACACGCCTATAAAGTTGATGATTGCCCAAAAGAAATCAGTGATTGTTTTCAAACGCCATA
JMFF037L22+ ACACGCCTATAAAGTTGATGATTGCCCAAAAGAAATCAGTGATTGTTTTCAAACGCCATA
rJMFF035D24- ACACGCCTATAAAGTTGATGATTGCCCAAAAGAAATCAGTGATTGTTTTCAAACGCCATA
rJMFF029B15- ACACGCCTATAAAGTTGATGATTGCCCAAAAGAAATCAGTGATTGTTTTCAAACGCCATA
JMFF035D24+ ACACGCCTATAAAGTTGATGATTGCCCAAAAGAAATCAGTGATTGTTTTCAAACGCCATA
JMFF029B15+ ACACGCCTATAAAGTTGATGATTGCCCAAAAGAAATCAGTGATTGTTTTCAAACGCCATA
JMSF004A15+ ACACGCCTATAAAGTTGATGATTGCCCAAAAGAAATCAGTGATTGTTTTCAAACGCCATA
rJMFF001B19- ACACGCCTATAAAGTTGATGATTGCCCAAAAGAAATCAGTGATTGTTTTCAAACGCCATA
                      ____________________________________________________________
consensus ACACGCCTATAAAGTTGATGATTGCCCAAAAGAAATCAGTGATTGTTTTCAAACGCCATA
 
. : . : . : . : . : . :
JMFN039H11- TTGACCGCTTGGATTTGACAA
JMFN018M11+ TTGACCGCTTGGATTTGACAACACCTCTCTCGACGTAAGCCATTGGAAGCTCAGAGCTCC
JMFN042K02+ TTGACCGCTTGGATTTGACAACACCTCTCTCGACGTAAGCCATTGGAAGCTCAGAGCTCC
JMFN038D08+ TTGACCGCTTGGATTTGACAACACCTCTCTCGACGTAAGCCATTGGAAGCTCAGAGCTCC
JMFN003N08+ TTGACCGCTTGGATTTGACAACACCTCTCTCGACGTAAGCCATTGGAAGCTCAGAGCTCC
JMFN034J07+ TTGACCGCTTGGATTTGACAACACCTCTCTCGACGTAAGCCATTGGAAGCTCAGAGCTCC
JMFN034L20+ TTGACCGCTTGGATTTGACAACACCTCTCTCGACGTAAGCCA-TGGAAGCTCAGAGCTCC
JMFF037L22+ TTGACCGCTTGGATTTGACAACACCTCTCTCGACGTAAGCCATTGGAAGCTCAGAGCTCC
rJMFF035D24- TTGACCGCTTGGATTTGACAACACCTCTCTCGACGTAAGCCATTGGAAGCTCAGAGCTCC
rJMFF029B15- TTGACCGCTTGGATTTGACAACACCTCTCTCGACGTAAGCCATTGGAAGCTCAGAGCTCC
JMFF035D24+ TTGACCGCTTGGATTTGACAACACCTCTCTCGACGTAAGCCATTGGAAGCTCAGAGCTCC
JMFF029B15+ TTGACCGCTTGGATTTGACAACACCTCTCTCGACGTAAGCCATTGGAAGCTCAGAGCTCC
JMSF004A15+ TTGACCGCTTGGATTTGACAACACCTCTCTCGACGTAAGCCATTGGAAGCTCAGAGCTCC
rJMFF001B19- TTGACCGCTTGGATTTGACAACACCTCTCTCGACGTAAGCCATTGGAAGCTCAGAGCTCC
                      ____________________________________________________________
consensus TTGACCGCTTGGATTTGACAACACCTCTCTCGACGTAAGCCATTGGAAGCTCAGAGCTCC
 
. : . : . : . : . : . :
JMFN018M11+ TTCACAATCCAGGATCTTC
JMFN042K02+ TTCACAATCCAGG
JMFN003N08+ TTCACAATCCAGG
JMFN034J07+ TTCACAATCCAGGATCTTC
JMFN034L20+ TTCACAATC
JMFF037L22+ TTCACAATCCAGGATCTTCGTCTGCTCTTCTCGAC
rJMFF035D24- TTCACAATCCAGGATCTTCGTCTGCTCTTCTCGAC
rJMFF029B15- TTCACAATCCAGGATCTTCGTCTGCTCTTCTCGAC
JMFF035D24+ TTCACAATCCAGGATCTTCGTCTGCTCTTCTCGAC
JMFF029B15+ TTCACAATCCAGGATCTTCGTCTGCTCTTCTCGAC
JMSF004A15+ TTCACAATCCAGGATCTTCGTCTGCTCTTCTCGAC
rJMFF001B19- TTCACAATCCAGGATCTTCGTCTGCTCTTCTCCGATCATCGCTGTTCCAGACAGCGATGA
                      ____________________________________________________________
consensus TTCACAATCCAGGATCTTCGTCTGCTCTTCTCGACTCATCGCTGTTCCAGACAGCGATGA