Contig 003922:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF052I23+                                                               TGTCTTAT
                      ____________________________________________________________
consensus                                                                 TGTCTTAT
 
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JMSF052I23+           GTTGACTACTTTCATCAATGACTATCCTTGGAGCAGTTGTGTTGGGCAGCAGAGCAGCAA
                      ____________________________________________________________
consensus             GTTGACTACTTTCATCAATGACTATCCTTGGAGCAGTTGTGTTGGGCAGCAGAGCAGCAA
 
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JMSF052I23+           CGGCCGTTTGAAAAGAATCCTGGGCGTCAGCTTCCGGTGGTTCAACATTGAGATCAGCCA
                      ____________________________________________________________
consensus             CGGCCGTTTGAAAAGAATCCTGGGCGTCAGCTTCCGGTGGTTCAACATTGAGATCAGCCA
 
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JMSF052I23+           AAATGGCGACTTTTGATGGCCGAGATGGCTGCGGCTGTGACCACACAGAGATGGTGTTGG
                      ____________________________________________________________
consensus             AAATGGCGACTTTTGATGGCCGAGATGGCTGCGGCTGTGACCACACAGAGATGGTGTTGG
 
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JMSF052I23+           AGCTGTCAGCACCAGTGGGAGATTCTGATTTCACTGGAGGAGGGACAACACTCGCCGGAA
                      ____________________________________________________________
consensus             AGCTGTCAGCACCAGTGGGAGATTCTGATTTCACTGGAGGAGGGACAACACTCGCCGGAA
 
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JMFS117B12+                                CTGTATAACCATCAAGAATACATGTGGCAAGGAATTACC
JMSF052I23+           GTTCAGACATTTTATTTTTGGCTGTATAACCATCAAGAATACATGTGGCAAGGAATTACC
                      ____________________________________________________________
consensus             GTTCAGACATTTTATTTTTGGCTGTATAACCATCAAGAATACATGTGGCAAGGAATTACC
 
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JMFS117B12+           AATGGCAAACACCACAACATCTTCTAGCAACTTTTCAATATGGTCAGTACACCCTCTGAT
JMSF052I23+           AATGGCAAACACCACAACATCTTCTAGCAACTTTTCAATATGGTCAGTACACCCTCTGAT
                      ____________________________________________________________
consensus             AATGGCAAACACCACAACATCTTCTAGCAACTTTTCAATATGGTCAGTACACCCTCTGAT
 
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JMFS117B12+           GCCATCTTCTGGTTTTACTAGCACCAATGGATACAATTATTCTAACAGTGAGTTTTAAAC
JMSF052I23+           GCCATCTTCTGGTTTTACTAGCACCAATGGATACAATTATTCTAACAGTGAGTTTTAAAC
                      ____________________________________________________________
consensus             GCCATCTTCTGGTTTTACTAGCACCAATGGATACAATTATTCTAACAGTGAGTTTTAAAC
 
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JMFS117B12+           TTCTTCAAAATGTATATTGTTCCCTTCTATTTTTGGTTGGAGGTTTTGGTATTGGCTATG
JMSF052I23+           TTCTTCAAAATGTATATTGTTCCCTTCTATTTTTGGTTGGAGGTTTTGGTATTGGCTATG
                      ____________________________________________________________
consensus             TTCTTCAAAATGTATATTGTTCCCTTCTATTTTTGGTTGGAGGTTTTGGTATTGGCTATG
 
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JMFS117B12+           GTCGGTCAAAGCAGCGGTGACGGCCGACGGCGGTCACCGCGCTGAGGAGATAGCGAGAGA
JMSF052I23+           GTCGGTCAAAGCAGCGGTGACGGCCGACGGCGGTCACCGCGCTGAGGAGATAGCGAGAGA
                      ____________________________________________________________
consensus             GTCGGTCAAAGCAGCGGTGACGGCCGACGGCGGTCACCGCGCTGAGGAGATAGCGAGAGA
 
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JMFS117B12+           CAGAAATCGCGACTGGGTCTGAGATTCCTGAGAGTGTTCGAAGCAGCGGCGGTCACGGCA
JMSF052I23+           CAGAAATCGCGACTGGGTCTGAGATTCCTGAGAGTGTTCGAAGCAGCGGCGGTCACGGCA
                      ____________________________________________________________
consensus             CAGAAATCGCGACTGGGTCTGAGATTCCTGAGAGTGTTCGAAGCAGCGGCGGTCACGGCA
 
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JMFS117B12+           GTCGCGGCGGAGGCGACTTCCTGAATTGCGCCGAGGACTGAGTGTTGAATACTGAGA   
JMSF052I23+           GTCGCGGCGGAGGCGACTTCCTGAATTGCGCCGAGGACTGAGTGTTGAATACTGAGAACC
                      ____________________________________________________________
consensus             GTCGCGGCGGAGGCGACTTCCTGAATTGCGCCGAGGACTGAGTGTTGAATACTGAGAACC