| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF020J21 | Sequence | 608 | 003921 (16) | ref|XP_009773503.1| | 2e-66 | PREDICTED: ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Nic | 612 | 003921 (16) | ref|XP_009608109.1| | 3e-60 | PREDICTED: ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Nic |
| JMFF043O13 | Sequence | 619 | 003921 (16) | ref|XP_009773503.1| | 2e-69 | PREDICTED: ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Nic | 331 | 003921 (16) | ref|XP_011097141.1| | 1e-10 | PREDICTED: ATP-dependent Clp protease proteolytic subunit 3, chloroplastic-like |
| JMFN018P09 | Sequence | 607 | 003921 (16) | ref|XP_009773503.1| | 1e-68 | PREDICTED: ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Nic | |||||
| JMSF010G17 | Sequence | 453 | 003921 (16) | ref|XP_009773503.1| | 2e-31 | PREDICTED: ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Nic | 740 | 003921 (16) | ref|XP_009608109.1| | 4e-112 | PREDICTED: ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Nic |
| JMSF011C10 | Sequence | 267 | 003921 (16) | 787 | 003921 (16) | ref|XP_009608109.1| | 7e-112 | PREDICTED: ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Nic | |||
| JMSF012C10 | Sequence | 214 | 016722 | 679 | 003921 (16) | ref|XP_009773503.1| | 6e-80 | PREDICTED: ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Nic | |||
| JMSF026J12 | Sequence | 679 | 003921 (16) | ref|XP_009773503.1| | 2e-83 | PREDICTED: ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Nic | 739 | 003921 (16) | ref|XP_010693678.1| | 1e-112 | PREDICTED: ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Bet |
| JMSF048N01 | Sequence | 556 | 003921 (16) | ref|XP_009608109.1| | 6e-61 | PREDICTED: ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Nic | 508 | 003921 (16) | ref|XP_009608109.1| | 3e-61 | PREDICTED: ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Nic |
| JMSF052F18 | Sequence | 756 | 003921 (16) | ref|XP_009773503.1| | 1e-89 | PREDICTED: ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Nic | 899 | 003921 (16) | ref|XP_009773503.1| | 1e-144 | PREDICTED: ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Nic |
This contig is upended
. : . : . : . : . : . :
rJMSF012C10- ATAACAACCTTCAATTCAATATAGAATA
JMSF048N01+ ATAACAACCTTCAATTCAATATAGAATA
rJMFF020J21- ATATAGAATA
rJMFF043O13- ATAACAACCTTCAATTCAATATAGAATA
rJMSF011C10- AAATGATGGGGAATAACAACCTTCAATTCAATATAGAATA
____________________________________________________________
consensus AAATGATGGGGAATAACAACCTTCAATTCAATATAGAATA
. : . : . : . : . : . :
rJMSF012C10- GTAAGGAATTAAGCACTATGTAATTTGTATATTCAGAAATGTAGTCAGACAATTTTTTTC
JMSF048N01+ GTAAGGAATTAAGCACTATGTAATTTGTATATTCAGAAATGTAGTCAGACAATTTTTTTC
rJMSF048N01- AGCACTATGTAATTTGTATATTCAGAAATGTAGTCAGACAATTTTTTTC
rJMFF020J21- GNAAGGAATTAAGCACTATGTAATTTGTATATNCANAAATGTAGNCAGACAATTTTTTTC
rJMFF043O13- GTAAGGAATTAAGCACTATGTAATTTGTATATTCAAAAATGTAGTCAGACAATTTTTTTC
rJMSF011C10- GTAAGGAATTAAGCACTATGTAATTTGTATATTCAGAAATGTAGTCAGACAATTTTTTTC
rJMSF010G17- GTAATTTGTATATTCAGAAATGTAGTCAGACAATTTTTTTC
rJMSF026J12- AGCACTATGTAATTTGTATATTCAGAAATGTAGTCAGACAATTTTTTTC
rJMSF052F18- AATGTAGTCAGACAATTTTTTTC
____________________________________________________________
consensus GTAAGGAATTAAGCACTATGTAATTTGTATATTCAGAAATGTAGTCAGACAATTTTTTTC
. : . : . : . : . : . :
rJMSF012C10- AACTGAACGGCTAAGAGTTTGCAATCATGTCGAAGTGGATGCTTCTATTCACCATTACCT
JMSF048N01+ AACTGAACGGCTAAGAGTTTGCAATCATGTCGAAGTGGATGCTTCTATTCACCATTACCT
rJMSF048N01- AACTGAACGGCTAAGAGTTTGCAATCATGTCGAAGTGGATGCTTCTATTCACCATTACCT
rJMFF020J21- NACTGAACGGCTAANAGTTTGCAATCATGTCGAANTGGATGCTTCTATTCACCATTACCT
rJMFF043O13- AACTGAACGGCTAAAAGTTTGCAATCATGTCGAAGTGGATGCTTCTATTCACCATTACCT
rJMSF011C10- AACTGAACGGCTAAGAGTTTGCAATCATGTCGAAGTGGATGCTTCTATTCACCATTACCT
rJMSF010G17- AACTGAACGGCTAAGAGTTTGCAATCATGTCGAAGTGGATGCTTCTATTCACCATTACCT
rJMSF026J12- AACTGAACGGCTAAGAGTTTGCAATCATGTCGAAGTGGATGCTTCTATTCACCATTACCT
rJMSF052F18- AACTGAACGGCTAAGAGTTTGCAATCATGTCGAAGTGGATGCTTCTATTCACCATTACCT
____________________________________________________________
consensus AACTGAACGGCTAAGAGTTTGCAATCATGTCGAAGTGGATGCTTCTATTCACCATTACCT
. : . : . : . : . : . :
rJMSF012C10- TGCTTGCTGAGATATCCATTTTGCAAGAGCTTCTCCTCTGATGGCATATTCTGCATTGCT
JMSF048N01+ TGCTTGCTGAGATATCCATTTTGCAAGAGCTTCTCCTCTGATGGCATATTCTGCATTGCT
rJMSF048N01- TGCTTGCTGAGATATCCATTTTGCAAGAGCTTCTCCTCTGATGGCATATTCTGCATTGCT
rJMFF020J21- TGCTTGCTGAGATATCCATTTTGNAANANCTTCTCCTCTGATGGCATATTCTGCATTGCT
rJMFF043O13- TGCTTGCTGAGATATCCACACTGCAAGAGCTTCTCCTCTGATGGCATATTCTGCATTGCT
rJMSF011C10- TGCTTGCTGAGATATCCATTTTGCAAGAGCTTCTCCTCTGATGGCATATTCTGCATTGCT
rJMSF010G17- TGCTTGCTGAGATATCCATTTTGCAAGAGCTTCTCCTCTGATGGCATATTCTGCATTGCT
rJMSF026J12- TGCTTGCTGAGATATCCATTTTGCAAGAGCTTCTCCTCTGATGGCATATTCTGCATTGCT
rJMSF052F18- TGCTTGCTGAGATATCCATTTTGCAAGAGCTTCTCCTCTGATGGCATATTCTGCATTGCT
____________________________________________________________
consensus TGCTTGCTGAGATATCCATTTTGCAAGAGCTTCTCCTCTGATGGCATATTCTGCATTGCT
. : . : . : . : . : . :
rJMSF012C10- TTCTTGGTGCCCTCAGCTTTCCATGGACCCAAAATTCGGGGTTCTGGTGGAGGCGTTGCT
JMSF048N01+ TTCTTGGTGCCCTCAGCTTTCCATGGACCCAAAATTCGGGGTTCTGGTGGAGGCGTTGCT
rJMSF048N01- TTCTTGGTGCCCTCAGCTTTCCATGGACCCAAAATTCGGGGTTCTGGTGGAGGCGTTGCT
rJMFF020J21- TTCTTGGNGCCCTCAGCTTTCCATGGACCCAAAATTCGGGGTTCTGGTGGAGGCGTTGCT
rJMFF043O13- TTCTTGGGGCCCTCAGCTTTCCATGGACCCAAAATTCGGGGTTCTGGGGGAGGCGTTGCT
rJMSF011C10- TTCTTGGTGCCCTCAGCTTTCCATGGACCCAAAATTCGGGGTTCTGGTGGAGGCGTTGCT
rJMSF010G17- TTCTTGGTGCCCTCAGCTTTCCATGGACCCAAAATTCGGGGTTCTGGTGGAGGCGTTGCT
rJMSF026J12- TTCTTGGTGCCCTCAGATTTCCATGGACCCAAAATTCGGGGTTCTGGTGGAGGCGTTGCT
rJMSF052F18- TTCTTGGTGCCCTCAGCTTTCCATGGACCCAAAATTCGGGGTTCTGGTGGAGGCGTTGCT
____________________________________________________________
consensus TTCTTGGTGCCCTCAGCTTTCCATGGACCCAAAATTCGGGGTTCTGGTGGAGGCGTTGCT
. : . : . : . : . : . :
rJMSF012C10- TCTGCTATTGGTGCCACGAGTCCTGGTTTTCCATCATCGATAACTGCATCAACTAGCCCG
JMSF048N01+ TCTGCTATTGGTGCCACGAGTCCTGGTTTTCCATCATCGATAACTGCATCAACTAGCCCG
rJMSF048N01- TCTGCTATTGGTGCCACGAGTCCTGGTTTTCCATCATCGATAACTGCATCAACTAGCCCG
rJMFF020J21- TCTGCTATTGGTGCCACGAGNCCTGGNTTTCCATCATCNATAACTGCATCAACTAGCCCG
rJMFF043O13- TCTGCTATTGGTGCCACGAGTCCTGGTTTTCCATCATCGATAACTGCATCAACTA
rJMSF011C10- TCTGCTATTGGTGCCACGAGTCCTGGTTTTCCATCATCGATAACTGCATCAACTAGCCCG
rJMSF010G17- TCTGCTATTGGTGCCACGAGTCCTGGTTTTCCATCATCGATAACTGCATCAACTAGCCCG
rJMSF026J12- TCTGCTATTGGTGCCACGAGTCCTGGTTTTCCATCATCGATAACTGCATCAACTAGCCCG
rJMSF052F18- TCTGCTATTGGTGCCACGAGTCCTGGTTTTCCATCATCGATAACTGCATCAACTAGCCCG
____________________________________________________________
consensus TCTGCTATTGGTGCCACGAGTCCTGGTTTTCCATCATCGATAACTGCATCAACTAGCCCG
. : . : . : . : . : . :
rJMSF012C10- TACTCTAAAGCCTCCCAAGCACTCATAAAATTATCACGATCAGTATCCAGTTCAATCTGT
JMSF048N01+ TACTCTAAAGCCTCCCAAGCACTCATAAAATTATCACGATCAGTATCCAGTTCAATCTGT
rJMSF048N01- TACTCTAAAGCCTCCCAAGCACTCATAAAATTATCACGATCAGTATCCAGTTCAATCTGT
rJMFF020J21- TACTCTAAAGCCTCCCAAGCACTCATAAAATTATCACGATCANNATCCAGTTCAATCTGT
rJMSF011C10- TACTCTAAAGCCTCCCAAGCACTCATAAAATTATCACGATCAGTATCCAGTTCAATCTGT
rJMSF010G17- TACTCTAAAGCCTCCCAAGCACTCATAAAATTATCACGATCAGTATCCAGTTCAATCTGT
rJMSF026J12- TACTCTAAAGCCTCCCAAGCACTCATAAAATTATCACGATCAGTATCCAGTTCAATCTGT
rJMSF052F18- TACTCTAAAGCCTCCCAAGCACTCATAAAATTATCACGATCAGTATCCAGTTCAATCTGT
____________________________________________________________
consensus TACTCTAAAGCCTCCCAAGCACTCATAAAATTATCACGATCAGTATCCAGTTCAATCTGT
. : . : . : . : . : . :
rJMSF012C10- TCCTCAGGCTTTCCTGTGGCTCGTGATAGTATTTTATTTAGCTTGACCTTGTGGTATGCC
JMSF048N01+ TCCTCAGGCTTTCCTGTGGCTCGTGATAGTATTTTATTTAGCTTGACCTTGTGGTATGCC
rJMSF048N01- TCCTCAGGCTTTCCTGTGGCTCGTGATAGTATTTTATTTAGCTTGACCTTGTGGTATGCC
rJMFF020J21- TCCNCANGCTTTCCTGTGGCTCGNGATAGTATTTTATTTAGCTTGACCTTGNGGNATGCC
rJMSF011C10- TCCTCAGGCTTTCCTGTGGCTCGTGATAGTATTTTATTTAGCTTGACCTTGTGGTATGCC
rJMSF010G17- TCCTCAGGCTTTCCTGTGGCTCGTGATAGTATTTTATTTAGCTTGACCTTGTGGTATGCC
rJMSF026J12- TCCTCAGGCTTTCCTGTGGCTCGTGATAGTATTTTATTTAGCTTGACCTTGTGGTATGCC
rJMSF052F18- TCCTCAGGCTTTCCTGTGGCTCGTGATAGTATTTTATTTAGCTTGACCTTGTGGTATGCC
JMSF052F18+ TTTAATTAGCTTGACCTTGTGGTATGCC
____________________________________________________________
consensus TCCTCAGGCTTTCCTGTGGCTCGTGATAGTATTTTATTTAGCTTGACCTTGTGGTATGCC
. : . : . : . : . : . :
rJMSF012C10- ATTT-CACGTACTCGNATCATCATATCNGTTATACTACCACCAGCAGATCCGAGGGGTTG
JMSF048N01+ ATTT-CACGTACTCGTATCATCATATCTGTTATACTACCACCAGCAGATCCGAGGGGTTG
rJMSF048N01- ATTT-CACGTACTCGTATCATCATATCTGTTATACTACCACCAGCAGATCCGAGGGGTTG
rJMFF020J21- ATTT-CACGTACTCNTATCATCATATCTGNTATACTACCACCAACANATCCGAGGGGTNG
rJMSF011C10- ATTT-CACGTACTCGTATCATCATATCTGTTATACTACCACCAGCAGATCCGAGGGGTTG
rJMSF010G17- ATTT-CACGTACTCGTATCATCATATCTGTTATACTACCACCAGCAGATCCGAGGGGTTG
rJMSF026J12- ATTT-CACGTACTCGTATCATCATATCTGTTATACTACCACCAGCAGATCCGAGGGGTTG
rJMSF052F18- ATTT-CACGTACTCGTATCATCATATCTGTTATACTACCACCAGCAGATCCGAGGGGTTG
JMSF026J12+ CCAGCAGATCCGAGGGGTTG
JMSF052F18+ ATTTNCACGTACTCGTATCATCATATCTGTTATACTACCACCAGCAGATCCGAGGGGTTG
____________________________________________________________
consensus ATTT-CACGTACTCGTATCATCATATCTGTTATACTACCACCAGCAGATCCGAGGGGTTG
. : . : . : . : . : . :
rJMSF012C10- ATGGATCATGACCCTTGCATTTGGCATTATGTACCTCTTTCCTTTCGAGCCAGTCGCAAG
JMSF048N01+ ATGGATCATGACCCTTGCATTTGGCATTATGTACCTCTTT
rJMSF048N01- ATGGATCATGACCCTTGCATTTGGCATTATGTACCTCTTT
rJMFF020J21- ATGGATCATGACCCTTGCATTTGGNATTATGTACCTCTTTCCTNTCNAGCCANTCGNAAA
rJMSF011C10- ATGGATCATGACCCTTGCATTTGGCATTATGTACCTCTTTCCTTTCGAGCCAGTCGCAAG
rJMSF010G17- ATGGATCATGACCCTTGCATTTGGCATTATGTACCTCTTTCCTTTCGAGCCAGTCGCAAG
rJMSF026J12- ATGGATCATGACCCTTGCATTTGGCATTATGTACCTCTTTCCTTTCGAGCCAGTCGCAAG
rJMSF052F18- ATGGATCATGACCCTTGCATTTGGCATTATGTACCTCTTTCCTTTCGAGCCAGTCGCAAG
JMSF026J12+ ATGGATCATGACCCTTGCATTTGGCATTATGTACCTCTTTCCTTTCGAGCCAGTCGCAAG
JMFF043O13+ TCTTTCCTTTCGAGCCAGTCGCAAG
JMFF020J21+ CAGTCGCAAG
JMFN018P09+ TTCGAGCCAGTCGCAAG
JMSF052F18+ ATGGATCATGACCCTTGCATTNGGCATTATGTACCTCTTTCCTTTCGAGCCAGTCGCAAG
____________________________________________________________
consensus ATGGATCATGACCCTTGCATTTGGCATTATGTACCTCTTTCCTTTCGAGCCAGTCGCAAG
. : . : . : . : . : . :
rJMSF012C10- GAGAAATGCACCCATTGATGCNGCAATCCCCAGACAGATAGTAGAAACATCAGCCTTACA
rJMFF020J21- GAGAAATGCACCCATTGATGCANCAATCCCCAGACAGATANTACAAACATCAGCCTT
rJMSF011C10- GAGAAATGCACCCATTGATGCAGCAATCCCCAGACAGATAGTAGAAACATCAGCCTTACA
rJMSF010G17- GAGAAATGCACCCATTGATGCAGCAATCCCCAGACAGATAGTAGAAACATCAGCCTTACA
rJMSF026J12- GAGAAATGCACCCATTGATGCAGCAATCCCCAGACAGATAGTAGAAACATCAGCCTTACA
rJMSF052F18- GAGAAATGCACCCATTGATGCAGCAATCCCCAGACAGATAGTAGAAACATCAGCCTTACA
JMSF026J12+ GAGAAATGCACCCATTGATGCAGCAATCCCCAGACAGATAGTAGAAACATCAGCCTTACA
JMFF043O13+ GAGAAATGCACCCATTGATGCAGCAATCCCCAGACAGATAGTAGAAACATCAGCCTTACA
JMFF020J21+ GAGAAATGCACCCATTGATGCAGCAATCCCCAGACAGATAGTAGAAACATCAGCCTTACA
JMFN018P09+ GAGAAATGCACCCATTGATGCAGCAATCCCCAGACAGATAGTAGAAACATCAGCCTTACA
JMSF052F18+ GAGAAATGCACCCATTGATGCAGCAATCCCCAGACAGATAGTAGAAACATCAGCCTTACA
____________________________________________________________
consensus GAGAAATGCACCCATTGATGCAGCAATCCCCAGACAGATAGTAGAAACATCAGCCTTACA
. : . : . : . : . : . :
rJMSF012C10- TTGTTTTCATTGCATCATATATTCCCATTCCAGCAGTAACGGAA
rJMSF011C10- TTG-TTTCATTGCATCATATATTCCCATTCCAGCAGTAACGGAACCACCAGGCGAGTTTA
rJMSF010G17- TTG-TTTCATTGCATCATATATTCCCATTCCAGCAGTAACGGAACCACCAGGCGAGTTTA
rJMSF026J12- TTG-TTTCATTGCATCATATATTCCCATTCCAGCAGTAACGGAACCACCAGGCGAGTTTA
rJMSF052F18- TTG-TTTCATTGCATCATATATTCCCATTCCAGCAGTAACGGAACCACCAGGCGAGTTTA
JMSF026J12+ TTG-TTTCATTGCATCATATATTCCCATTCCAGCAGTAACGGAACCACCAGGCGAGTTTA
JMFF043O13+ TTG-TTTCATTGCATCATATATTCCTATTCCAGCAGTAACGGAACCACCAGGCGAGTTTA
JMFF020J21+ TTG-TTTCATTGCATCATATATTCCCATTCCAGCAGTAACGGAACCACCAGGCGAGTTTA
JMFN018P09+ TTG-TTTCATTGCATCATATATTCCCATTCCAGCAGTAACGGAACCACCAGGCGAGTTTA
JMSF052F18+ TTG-TTTCATTGCATCATATATTCCCATTCCAGCAGTAACGGAACCACCAGGCGAGTTTA
____________________________________________________________
consensus TTG-TTTCATTGCATCATATATTCCCATTCCAGCAGTAACGGAACCACCAGGCGAGTTTA
. : . : . : . : . : . :
rJMSF011C10- TGAACAATTTGATGTCCTTTGTGGAGTCTTCAGCATCGAGAAGTAATAGCTGGCTTATAA
rJMSF010G17- TGAACAATTTGATGTCCTTTGTGGAGTCTTCAGCATCGAGAAGTAATAGCTGGCTTATAA
rJMSF026J12- TGAACAATTTGATGTCCTTTGTGGAGTCTTCAGCATCGAGAAGTAATAGCTGGCTTATAA
rJMSF052F18- TGAACAATTTGATGTCCTTTGTGGAGTCTTCAGCATCGAGAAGTAATAGCTGGCTTATAA
JMSF026J12+ TGAACAATTTGATGTCCTTTGTGGAGTCTTCAGCATCGAGAAGTAATAGCTGGCTTATAA
JMFF043O13+ TGAACAATTTGATGTCCTTTGTGGAGTCTTCAGCATCGAGAAGTAATAGCTGGCTTATAA
JMFF020J21+ TGAACAATTTGATGTCCTTTGTGGAGTCTTCAGCATCGAGAAGTAATAGCTGGCTTATAA
JMFN018P09+ TGAACAATTTGATGTCCTTTGTGGAGTCTTCAGCATCGAGAAGTAATAGCTGGCTTATAA
JMSF010G17+ CTTCAGCATCGAGAAGTAATAGCTGGCTTATAA
JMSF052F18+ TGAACAATTTGATGTCCTTTGTGGAGTCTTCAGCATCGAGAAGTAATAGCTGGCTTATAA
____________________________________________________________
consensus TGAACAATTTGATGTCCTTTGTGGAGTCTTCAGCATCGAGAAGTAATAGCTGGCTTATAA
. : . : . : . : . : . :
rJMSF011C10- TAAGATCTGCTGTTGCATCATCTACCTGA
rJMSF010G17- TAAGATCTGCTGTTGCATCATCTACCTGA
rJMSF026J12- TAAGATCTGCTGTTGCATCATCTACCTGAGAG
rJMSF052F18- TAAGATCTGCTGTTGCATCATCTACCTGAGAGCCCAAGAAGACGATTCTCTGGCGAAGAA
JMSF026J12+ TAAGATCTGCTGTTGCATCATCTACCTGAGAGCCCAAGAAGACGATTCTCTGGCGAAGAA
JMFF043O13+ TAAGATCTGCTGTTGCATCATCTACCTGAGAGCCCAAGAAGACGATTCTCTGGCGAAGAA
JMFF020J21+ TAAGATCTGCTGTTGCATCATCTACCTGAGAGCCCAAGAAGACGATTCTCTGGCGAAGAA
JMFN018P09+ TAAGATCTGCTGTTGCATCATCTACCTGAGAGCCCAAGAAGACGATTCTCTGGCGAAGAA
JMSF010G17+ TAAGATCTGCTGTTGCATCATCTACCTGAGAGCCCAAGAAGACGATTCTCTGGCGAAGAA
JMSF052F18+ TAAGATCTGCTGTTGCATCATCTACCTGAGAGCCCAAGAAGACGATTCTCTGGCGAAGAA
____________________________________________________________
consensus TAAGATCTGCTGTTGCATCATCTACCTGAGAGCCCAAGAAGACGATTCTCTGGCGAAGAA
. : . : . : . : . : . :
rJMSF052F18- GCATATTGGTAGTGTCCAGTTCTTCAAATCTGGGCAGCTTAGGAGGAGCTGCGGTGGAGT
JMSF026J12+ GCATATTGGTAGTGTCCAGTTCTTCAAATCTGGGCAGCTTAGGAGGAGCTGCGGTGGAGT
JMFF043O13+ GCATATTGGTAGTGTCCAGTTCTTCAAATCTGGGCAGCTTAGGAGGAGCTGCGGTGGAGT
JMFF020J21+ GCATATTGGTAGTGTCCAGTTCTTCAAATCTGGGCAGCTTAGGAGGAGCTGCGGTGGAGT
JMFN018P09+ GCATATTGGTAGTGTCCAGTTCTTCAAATCTGGGCAGCTTAGGAGGAGCTGCGGTGGAGT
JMSF010G17+ GCATATTGGTAGTGTCCAGTTCTTCAAATCTGGGCAGCTTAGGAGGAGCTGCGGTGGAGT
JMSF052F18+ GCATATTGGTAGTGTCCAGTTCTTCAAATCTGGGCAGCTTAGGAGGAGCTGCGGTGGAGT
____________________________________________________________
consensus GCATATTGGTAGTGTCCAGTTCTTCAAATCTGGGCAGCTTAGGAGGAGCTGCGGTGGAGT
. : . : . : . : . : . :
rJMSF052F18- TGAAAACATCCCAGTTGCTGGAAAGAGTCTGTCTTGCTGTANAAAAGCTCTGCTTTCTTG
JMSF026J12+ TGAAAACATCCCAGTTGCTGGAAAGAGTCTGTCTTGCTGTAGAAAAGCTCTGCTTTCTTG
JMSF011C10+ CCCAGTTGCTGGAAAGAGTCTGTCTTGCTGTAGAAAAGCTCTGCTTTCTTG
JMFF043O13+ TGAAAACATCCCAGTTGCTGGAAAGAGTCTGTCTTGCTGTAGAAAAGCTCTGCTTTCTTG
JMFF020J21+ TGAAAACATCCCAGTTGCTGGAAAGAGTCTGTCTTGCTGTAGAAAAGCTCTGCTTTCTTG
JMFN018P09+ TGAAAACATCCCAGTTGCTGGAAAGAGTCTGTCTTGCTGTAGAAAAGCTCTGCTTTCTTG
JMSF010G17+ TGAAAACATCCCAGTTGCTGGAAAGAGTCTGTCTTGCTGTAGAAAAGCTCTGCTTTCTTG
JMSF052F18+ TGAAAACATCCCAGTTGCTGGAAAGAGTCTGTCTTGCTGTAGAAAAGCTCTGCTTTCTTG
____________________________________________________________
consensus TGAAAACATCCCAGTTGCTGGAAAGAGTCTGTCTTGCTGTAGAAAAGCTCTGCTTTCTTG
. : . : . : . : . : . :
rJMSF052F18- CTTTTACTGACAAATCCCTTCTTCTACAGCCATGTCCG
JMSF026J12+ CTTTTACTGACAAATCCCTTCTTCTACAGCCATGTCCGATTGTTGTCCTTGCGTTTCGTG
JMSF011C10+ CTTTTACTGACAAATCCCTTCTTCTACAGCCATGTCCGATTGTTGTCCTTGCGTTTCGTG
JMFF043O13+ CTTTTACTGACAAATCCCTTCTTCTACAGCCATGTCCGATTGTTGTCCTTGCGTTTCGTG
JMFF020J21+ CTTTTACTGACAAATCCCTTCTTCTACAGCCATGTCCGATTGTTGTCCTTGCGTTTCGTG
JMFN018P09+ CTTTTACTGACAAATCCCTTCTTCTACAGCCATGTCCGATTGTTGTCCTTGCGTTTCGTG
JMSF010G17+ CTTTTACTGACAAATCCCTTCTTCTACAGCCATGTCCGATTGTTGTCCTTGCGTTTCGTG
JMSF052F18+ CTTTTACTGACAAATCCCTTCTTCTACAGCCATGTCCGATTGTTGTCCTTGCGTTTCGTG
____________________________________________________________
consensus CTTTTACTGACAAATCCCTTCTTCTACAGCCATGTCCGATTGTTGTCCTTGCGTTTCGTG
. : . : . : . : . : . :
JMSF026J12+ ATTGGAGAAATTGGGGATTGGTTTGAGAAATTGGGAAACTGGTATTCAAGAAATTTCTTG
JMSF011C10+ ATTGGAGAAATTGGGGATTGGTTTGAGAAATTGGGAAACTGGTATTCAAGAAATTTCTTG
JMFF043O13+ ATTGGAGAAATTGGGGATTGGTTTGAGAAATTGGGAAACTGGTATTCAAGAAATTTCTTG
JMFF020J21+ ATTGGAGAAATTGGGGATTGGTTTGAGAAATTGGGAAACTGGTATTCAAGAAATTTCTTG
JMFN018P09+ ATTGGAGAAATTGGGGATTGGTTTGAGAAATTGGGAAACTGGTATTCAAGAAATTTCTTG
JMSF010G17+ ATTGGAGAAATTGGGGATTGGTTTGAGAAATTGGGAAACTGGTATTCAAGAAATTTCTTG
JMSF052F18+ ATTGGAGAAATTGGGGATTGGTTTGAGAAATTGGGAAACTGGTATTCAAGAAATTTCTTG
____________________________________________________________
consensus ATTGGAGAAATTGGGGATTGGTTTGAGAAATTGGGAAACTGGTATTCAAGAAATTTCTTG
. : . : . : . : . : . :
JMSF026J12+ AGGTTGAAGAGGATGTGCTGAACGTTAGATAACCGCTCTCCATATCCACTTCGCAATCGT
JMSF011C10+ AGGTTGAAGAGGATGTGCTGAACGTTAGATAACCGCTCTCCATATCCACTTCGCAATCGT
JMFF043O13+ AGGTTGAAGAGGATGTGCTGAACGTTAGATAACCGCTCTCCATATCCACTTCGCAATCGT
JMFF020J21+ AGGTTGAAGAGGATGTGCTGAACGTTAGATAACCGCTCTCCATATCCACTTCGCAATCGT
JMFN018P09+ AGGTTGAAGAGGATGTGCTGAACGTTAGATAACCGCTCTCCATATCCACTTCGCAATCGT
JMSF010G17+ AGGTTGAAGAGGATGTGCTGAACGTTAGATAACCGCTCTCCATATCCACTTCGCAATCGT
JMSF052F18+ AGGTTGAAGAGGATGTGCTGAACGTTAGATAACCGCTCTCCATATCCACTTCGCAATCGT
____________________________________________________________
consensus AGGTTGAAGAGGATGTGCTGAACGTTAGATAACCGCTCTCCATATCCACTTCGCAATCGT
. : . : . : . : . : . :
JMSF026J12+ TCCTCGTTTCTCTTTGCTCTGTAAAATGGGAACTCGAGGCGAGGGGTTTTGGCTAAGA
JMSF011C10+ TCCTCGTTTCTCTTTGCTCTGTAAAATGGGAACTC
JMFF043O13+ TCCTCGTTTCTCTTTGCTCTGTAAAATGGGAACTCGAGGCGAGGGGTTTTGGCTA
JMFF020J21+ TCCTCGTTTCTCTTTGCTCTGTAAAATGGGAACTCGAGGCGAGGGGTTTTGGCTAAGA
JMFN018P09+ TCCTCGTTTCTCTTTGCTCTGTAAAATGGGAACTCGAGGCGAGGGGT
JMSF010G17+ TCCTCGTTTCTCTTTGCTCTGTAAAATGGGAACTCGAGGCGAGGGGTTTTGGCTAAGA
JMSF052F18+ TCCTCGTTTCTCTTTGCTCTGTAAAATGGGAACTCGAGGCGAGGGGTTTTGGCTAAGATC
____________________________________________________________
consensus TCCTCGTTTCTCTTTGCTCTGTAAAATGGGAACTCGAGGCGAGGGGTTTTGGCTAAGATC