Contig 003914:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF035N17+                                    TCTCAGACTATCTTTAACAGGGGGAGGGGTATCCG
JMSF051L01+               TTCAGAATCATCAGCCTCAATTCTCAGACTATCTTTAACAGGGGGAGGGGTATCCG
                      ____________________________________________________________
consensus                 TTCAGAATCATCAGCCTCAATTCTCAGACTATCTTTAACAGGGGGAGGGGTATCCG
 
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JMFF035N17+           AAGACGAGCTCGAATTCGAGGCCTCCAATTTAGCGACGGGAATCTCGAAGTCCTCCATAG
JMSF051L01+           AAGACGAGCTCGAATTCGAGGCCTCCAATTTAGCGACGGGAATCTCGAAGTCCTCCATAG
                      ____________________________________________________________
consensus             AAGACGAGCTCGAATTCGAGGCCTCCAATTTAGCGACGGGAATCTCGAAGTCCTCCATAG
 
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JMFF035N17+           AAACCCCCAAACGGGCCAAACATCTGAAAACATCGTCAATTTCGCCACCGGAGCCGTCGA
JMSF051L01+           AAACCCCCAAACGGGCCAAACATCTGAAAACATCGTCAATTTCGCCACCGGAGCCGTCGA
                      ____________________________________________________________
consensus             AAACCCCCAAACGGGCCAAACATCTGAAAACATCGTCAATTTCGCCACCGGAGCCGTCGA
 
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JMFF035N17+           TTCGGATACTCTTACTGCCGTCCAGTTCCAGCGATCGGCTCCACTTACTGTCCAGCTCCA
JMSF051L01+           TTCGGATACTCTTACTGCCGTCCAGTTCCAGCGATCGGCTCCACTTACTGTCCAGCTCCA
                      ____________________________________________________________
consensus             TTCGGATACTCTTACTGCCGTCCAGTTCCAGCGATCGGCTCCACTTACTGTCCAGCTCCA
 
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JMFF035N17+           GCGACCGGCCAGTACGGGAAGTGGAGCCATCCCCGGAAAGAAGATGAGGTAGACGGCTCG
JMSF051L01+           GCGACCGGCCAGTACGGGAAGTGGAGCCATCCCCGG-AAGAAGATGAGGTAGACGGCTCG
                      ____________________________________________________________
consensus             GCGACCGGCCAGTACGGGAAGTGGAGCCATCCCCGGAAAGAAGATGAGGTAGACGGCTCG
 
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JMFF035N17+           TAGTCGACATTCCTCAGAGCGATGCTGCGCTCGAGCTTCGGCGAAGGCTTGGCGGCAGCT
JMSF051L01+           TAGTCGACATTCCTCAGAGCGATGCTGCGCTCGAGCTTCGGCGAAGGCTTGGCGGCAGCT
                      ____________________________________________________________
consensus             TAGTCGACATTCCTCAGAGCGATGCTGCGCTCGAGCTTCGGCGAAGGCTTGGCGGCAGCT
 
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JMFF035N17+           GATTTAGATCCGCGTCTTGACTTGGAGTCCATGCGCTTCTTAGGAACCAAGATCGAAGGT
JMSF013F10+                                                   TAGGAACCAAGATCGAAGGT
JMSF051L01+           GATTTAGATCCGCGTCTTGACTTGGAGTCCATGCGCTTCTTAGGAACCAAGATCGAAGGT
                      ____________________________________________________________
consensus             GATTTAGATCCGCGTCTTGACTTGGAGTCCATGCGCTTCTTAGGAACCAAGATCGAAGGT
 
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JMFF035N17+           AACCGATGCATCTCGATTCCAAGGTCGAGCTCGATCCATGTAGCGGTACGCCAATTGCTC
JMSF013F10+           AACCGATGCATCTCGATTCCAAGGTCGAGCTCGATCCATGTAGCGGTACGCCAATTGCTC
JMSF051L01+           AACCGATGCATCTCGATTCCAAGGTCGAGCTCGATCCATGTAGCGGTACGCCAATTGCTC
                      ____________________________________________________________
consensus             AACCGATGCATCTCGATTCCAAGGTCGAGCTCGATCCATGTAGCGGTACGCCAATTGCTC
 
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JMFF035N17+           AAAGGCAGAATTGAAGTAGCAACAGTAATCCGTTGGAATTTCCTAATCTTTCGGAACGCA
JMSF013F10+           AAAGGCAGAATTGAAGTAGCAACAGTAATCCGTTGGAATTTCCTAATCTTTCGGAACGCA
JMSF051L01+           AAAGGCAGAATTGAAGTAGCAACAGTAATCCGTTGGAATTTCCTAATCTTTCGGAACGCA
                      ____________________________________________________________
consensus             AAAGGCAGAATTGAAGTAGCAACAGTAATCCGTTGGAATTTCCTAATCTTTCGGAACGCA
 
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JMFF035N17+           CCGGCGCAATTTGGTAGAGCTCAGGAAATGGGGAAGAAAGT                   
JMSF013F10+           CCGGCGCAATTTGGTAGAGCTCAGGAAATGGGGAAGAAAGTGAAATGAAATCGCCGGCGG
JMSF051L01+           CCGGCGCAATTTGGTAGAGCTCAGGAAATGGGGAAGAAAGTGAAATGAAATCGCCGGCGG
                      ____________________________________________________________
consensus             CCGGCGCAATTTGGTAGAGCTCAGGAAATGGGGAAGAAAGTGAAATGAAATCGCCGGCGG
 
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JMSF013F10+           CGGTGATGAGAGAGAAAGAGAGAGAGCAGAGTAGCAGAC                     
JMSF051L01+           CGGTGATGAGAGAGAAAGAGAGAGAGCAGAGTAGCAGACAAGAGACTGGTAAACGCCGTC
                      ____________________________________________________________
consensus             CGGTGATGAGAGAGAAAGAGAGAGAGCAGAGTAGCAGACAAGAGACTGGTAAACGCCGTC