| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF012L14 | Sequence | 405 | 003913 (7) | ref|XP_006339100.1| | 2e-10 | PREDICTED: threonine dehydratase biosynthetic, chloroplastic-like [Solanum tube | 770 | 005370 (6) | gb|EYU41567.1| | 2e-72 | hypothetical protein MIMGU_mgv1a003249mg [Erythranthe guttata] |
| JMFF026K13 | Sequence | 538 | 003913 (7) | ref|XP_006339100.1| | 3e-37 | PREDICTED: threonine dehydratase biosynthetic, chloroplastic-like [Solanum tube | 786 | 005370 (6) | gb|EYU41567.1| | 2e-77 | hypothetical protein MIMGU_mgv1a003249mg [Erythranthe guttata] |
| JMSF013C17 | Sequence | 442 | 003913 (7) | ref|XP_006339100.1| | 6e-15 | PREDICTED: threonine dehydratase biosynthetic, chloroplastic-like [Solanum tube | 758 | 005370 (6) | ref|XP_009593672.1| | 4e-88 | PREDICTED: threonine dehydratase biosynthetic, chloroplastic [Nicotiana tomento |
| JMSF013P20 | Sequence | 253 | 003913 (7) | 789 | 005370 (6) | ref|XP_009593672.1| | 9e-101 | PREDICTED: threonine dehydratase biosynthetic, chloroplastic [Nicotiana tomento | |||
| JMSF051I15 | Sequence | 662 | 003913 (7) | ref|XP_006339100.1| | 5e-63 | PREDICTED: threonine dehydratase biosynthetic, chloroplastic-like [Solanum tube | 724 | 005370 (6) | gb|EYU41567.1| | 4e-79 | hypothetical protein MIMGU_mgv1a003249mg [Erythranthe guttata] |
| JMSF051P13 | Sequence | 659 | 003913 (7) | ref|XP_006339100.1| | 3e-63 | PREDICTED: threonine dehydratase biosynthetic, chloroplastic-like [Solanum tube | 618 | 008688 (18) | ref|XP_006436065.1| | 2e-57 | hypothetical protein CICLE_v10032980mg [Citrus clementina] ref|XP_006436066.1| h |
| JMSF053M05 | Sequence | 661 | 003913 (7) | ref|XP_006339100.1| | 5e-63 | PREDICTED: threonine dehydratase biosynthetic, chloroplastic-like [Solanum tube | 869 | 005370 (6) | ref|XP_009593672.1| | 6e-118 | PREDICTED: threonine dehydratase biosynthetic, chloroplastic [Nicotiana tomento |
This contig is upended
. : . : . : . : . : . :
JMSF051P13+ T
JMSF053M05+ T
JMSF051I15+ CT
____________________________________________________________
consensus CT
. : . : . : . : . : . :
JMSF051P13+ CAGGTGTAGTAACAGGCATTACAATCACAGCATCACACCCAAGTTTCTGTGCAGATAGAG
JMSF053M05+ CAGGTGTAGTAACAGGCATTACAATCACAGCATCACACCCAAGTTTCTGTGCAGATAGAG
JMSF051I15+ CAGGTGTAGTAACAGGCATTACAATCACAGCATCACACCCAAGTTTCTGTGCAGATAGAG
____________________________________________________________
consensus CAGGTGTAGTAACAGGCATTACAATCACAGCATCACACCCAAGTTTCTGTGCAGATAGAG
. : . : . : . : . : . :
JMSF051P13+ CAACCCCTTGGGCATGATTACCAGCAGATGAACAGATAACTCCTCTATCCAATACCTCCC
JMSF053M05+ CAACCCCTTGGGCATGATTACCAGCAGATGAACAGATAACTCCTCTATCCAATACCTCCC
JMSF051I15+ CAACCCCTTGGGCATGATTACCAGCAGATGAACAGATAACTCCTCTATCCAATACCTCCC
____________________________________________________________
consensus CAACCCCTTGGGCATGATTACCAGCAGATGAACAGATAACTCCTCTATCCAATACCTCCC
. : . : . : . : . : . :
JMSF051P13+ TTGGGAGTTTAGCCATCATATTATAAGCTCCTCGAAGTTTGAATGAGAAGACAGGTTGAA
JMSF053M05+ TTGGGAGTTTAGCCATCATATTATAAGCTCCTCGAAGTTTGAATGAGAAGACAGGTTGAA
JMFF026K13+ TGGGAGTTTAGCCATCATATTATAAGCTCCTCGAAGTTTGAATGAGAAGACAGGTTGAA
JMSF051I15+ TTGGGAGTTTAGCCATCATATTATAAGCTCCTCGAAGTTTGAATGAGAAGACAGGTTGAA
____________________________________________________________
consensus TTGGGAGTTTAGCCATCATATTATAAGCTCCTCGAAGTTTGAATGAGAAGACAGGTTGAA
. : . : . : . : . : . :
JMSF051P13+ GATCCTCCCTTTTGAGCCAGATTTTGTTCCCCAGCCTCGCCGTGAGCTTCGAGGCGAGTT
JMSF053M05+ GATCCTCCCTTTTGAGCCAGATTTTGTTCCCCAGCCTCGCCGTGAGCTTCGAGGCGAGTT
JMSF013C17+ CTCGCCGTGAGCTTCGAGGCGAGTT
JMFF026K13+ GATCCTCCCTTTTGAGCCAGATTTTGTTCCCCAGCCTCGCCGTGAGCTTCGAGGCGAGTT
JMSF051I15+ GATCCTCCCTTTTGAGCCAGATTTTGTTCCCCAGCCTCGCCGTGAGCTTCGAGGCGAGTT
____________________________________________________________
consensus GATCCTCCCTTTTGAGCCAGATTTTGTTCCCCAGCCTCGCCGTGAGCTTCGAGGCGAGTT
. : . : . : . : . : . :
JMSF051P13+ GCAACGGCGACTCAAAAGCTACATCGTATACCTTAGATGACAGTATCGCGGTCAAATACT
JMSF053M05+ GCAACGGCGACTCAAAAGCTACATCGTATACCTTAGATGACAGTATCGCGGTCAAATACT
JMSF013C17+ GCAACGGCGACTCAAAAGCTACATCGTATACCTTAGATGACAGTATCGCGGTCAAATACT
JMFF012L14+ AAAGCTACATCGTATACCTTAGATGACAGTATCGCGGTCAAATACT
JMFF026K13+ GCAACGGCGACTCAAAAGCTACATCGTATACCTTAGATGACAGTATCGCGGTCAAATACT
JMSF051I15+ GCAACGGCGACTCAAAAGCTACATCGTATACCTTAGATGACAGTATCGCGGTCAAATACT
____________________________________________________________
consensus GCAACGGCGACTCAAAAGCTACATCGTATACCTTAGATGACAGTATCGCGGTCAAATACT
. : . : . : . : . : . :
JMSF051P13+ CTACAGCTCTGTAGCTATAGGACTCATTTCCATCGTGGCAAGCGAGATTCGGAATAACGC
JMSF053M05+ CTACAGCTCTGTAGCTATAGGACTCATTTCCATCGTGGCAAGCGAGATTCGGAATAACGC
JMSF013C17+ CTACAGCTCTGTAGCTATAGGACTCATTTCCATCGTGGCAAGCGAGATTCGGAATAACGC
JMFF012L14+ CTACAGCTCTGTAGCTATAGGACTCATTTCCATCGTGGCAAGCGAGATTCGGAATAACGC
JMFF026K13+ CTACAGCTCTGTAGCTATAGGACTCATTTCCATCGTGGCAAGCGAGATTCGGAATAACGC
JMSF051I15+ CTACAGCTCTGTAGCTATAGGACTCATTTCCATCGTGGCAAGCGAGATTCGGAATAACGC
____________________________________________________________
consensus CTACAGCTCTGTAGCTATAGGACTCATTTCCATCGTGGCAAGCGAGATTCGGAATAACGC
. : . : . : . : . : . :
JMSF051P13+ ATCCAGGCTCACTGGTCAAGGAGCCCGGAGACACTACCGGCAATTCAGGCCGCGTCGCAG
JMSF053M05+ ATCCAGGCTCACTGGTCAAGGAGCCCGGAGACACTACCGGCAATTCAGGCCGCGTCGCAG
JMSF013C17+ ATCCAGGCTCACTGGTCAAGGAGCCCGGAGACACTACCGGCAATTCAGGCCGCGTCGCAG
JMFF012L14+ ATCCAGGCTCACTGGTCAAGGAGCCCGGAGACACTACCGGCAATTCAGGCCGCGTCGCAG
JMSF013P20+ TCAGGCCGCGTCGCAG
JMFF026K13+ ATCCAGGCTCACTGGTCAAGGAGCCCGGAGACACTACCGGCAATTCAGGCCGCGTCGCAG
JMSF051I15+ ATCCAGGCTCACTGGTCAAGGAGCCCGGAGACACTACCGGCAATTCAGGCCGCGTCGCAG
____________________________________________________________
consensus ATCCAGGCTCACTGGTCAAGGAGCCCGGAGACACTACCGGCAATTCAGGCCGCGTCGCAG
. : . : . : . : . : . :
JMSF051P13+ GCCGCAACTGCTTCTCGGCGGCTGTGGACGTGGCGGACAAAACCTGCGCCTCCGGCCTCG
JMSF053M05+ GCCGCAACTGCTTCTCGGCGGCTGTGGACGTGGCGGACAAAACCTGCGCCTCCGGCCTCG
JMSF013C17+ GCCGCAACTGCTTCTCGGCGGCTGTGGACGTGGCGGACAAAACCTGCGCCTCCGGCCTCG
JMFF012L14+ GCCGCAACTGCTTCTCGGCGGCTGTGGACGTGGCGGACAAAACCTGCGCCTCCGGCCTCG
JMSF013P20+ GCCGCAACTGCTTCTCGGCGGCTGTGGACGTGGCGGACAAAACCTGCGCCTCCGGCCTCG
JMFF026K13+ GCCGCAACTGCTTCTCGGCGGCTGTGGACGTGGCGGACAAAACCTGCGCCTCCGGCCTCG
JMSF051I15+ GCCGCAACTGCTTCTCGGCGGCTGTGGACGTGGCGGACAAAACCTGCGCCTCCGGCCTCG
____________________________________________________________
consensus GCCGCAACTGCTTCTCGGCGGCTGTGGACGTGGCGGACAAAACCTGCGCCTCCGGCCTCG
. : . : . : . : . : . :
JMSF051P13+ AGAGCGCAGCGCGAATTGAAGCTCCGCTAGTCGCTCTCCTTACATCGGCGGCCTTGACGG
JMSF053M05+ AGAGCGCAGCGCGAATTGAAGCTCCGCTAGTCGCTCTCCTTACATCGGCGGCCTTGACGG
JMSF013C17+ AGAGCGCAGCGCGAATTGAAGCTCCGCTAGTCGCTCTCCTTACATCGGCGGCCTTGACGG
JMFF012L14+ AGAGCGCAGCGCGAATTGAAGCTCCGCTAGTCGCTCTCCTTACATCGGCGGCCTTGACGG
JMSF013P20+ AGAGCGCAGCGCGAATTGAAGCTCCGCTAGTCGCTCTCCTTACATCGGCGGCCTTGACGG
JMFF026K13+ AGAGCGCAGCGCGAATTGAAGCTCCGCTAGTCGCTCTCCTTACATCGGCGGCCTTGACGG
JMSF051I15+ AGAGCGCAGCGCGAATTGAAGCTCCGCTAGTCGCTCTCCTTACATCGGCGGCCTTGACGG
____________________________________________________________
consensus AGAGCGCAGCGCGAATTGAAGCTCCGCTAGTCGCTCTCCTTACATCGGCGGCCTTGACGG
. : . : . : . : . : . :
JMSF051P13+ TGTAATTGGGAGCAATGGCAGCGGCCGGCGGCACGGGCTTGCACCGGAGATTGGGAGATT
JMSF053M05+ TGTAATTGGGAGCAATGGCAGCGGCCGGCGGCACGGGCTTGCACCGGAGATTGGGAGATT
JMSF013C17+ TGTAATTGGGAGCAATGGCAGCGGCCGGCGGCACGGGCTTGCACCGGAGATTGGGAGATT
JMFF012L14+ TGTAATTGGGAGCAATGGCAGCGGCCGGCGGCACGGGCTTGCACCGGAGATTGGGAGATT
JMSF013P20+ TGTAATTGGGAGCAATGGCAGCGGCCGGCGGCACGGGCTTGCACCGGAGATTGGGAGATT
JMFF026K13+ TGTAATTGGGAGCAATGGCAGCGGCCGGCGGCACGGGCTTGCACCGGAGATTGGGAGATT
JMSF051I15+ TGTAATTGGGAGCAATGGCAGCGGCCGGCGGCACGGGCTTGCACCGGAGATTGGGAGATT
____________________________________________________________
consensus TGTAATTGGGAGCAATGGCAGCGGCCGGCGGCACGGGCTTGCACCGGAGATTGGGAGATT
. : . : . : . : . : . :
JMSF051P13+ GTGTACTGGCGAAACGGAGAACGTCCATGGCGGCCTGGGAGTGGTCAAGGAAGCAG
JMSF053M05+ GTGTACTGGCGAAACGGAGAACGTCCATGGCGGCCTGGGAGTGGTCAAGGAAGCAG
JMSF013C17+ GTGTACTGGCGAAACGGAGAACGTCCATGGCGGCCTGGGAGTGGTCAAGGAAGCAG
JMFF012L14+ GTGTACTGGCGAAACGGAGAACGTCCATGGCGGCCTGGGAGTGGTCAAGGAAGCAG
JMSF013P20+ GTGTACTGGCGAAACGGAGAACGTCCATGGCGGCCTGGGAGTGGTCAAGGAAGCAG
JMFF026K13+ GTGTACTGGCGAAACGGAGAACGTCCATGGCGGCCTGGGAGTGGTCAAGGAAGCAG
JMSF051I15+ GTGTACTGGCGAAACGGAGAACGTCCATGGCGGCCTGGGAGTGGTCAAGGAAGCAGGGCC
____________________________________________________________
consensus GTGTACTGGCGAAACGGAGAACGTCCATGGCGGCCTGGGAGTGGTCAAGGAAGCAGGGCC