Contig 003913:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012L14Sequence405003913 (7)ref|XP_006339100.1|2e-10PREDICTED: threonine dehydratase biosynthetic, chloroplastic-like [Solanum tube770005370 (6)gb|EYU41567.1|2e-72hypothetical protein MIMGU_mgv1a003249mg [Erythranthe guttata]
JMFF026K13Sequence538003913 (7)ref|XP_006339100.1|3e-37PREDICTED: threonine dehydratase biosynthetic, chloroplastic-like [Solanum tube786005370 (6)gb|EYU41567.1|2e-77hypothetical protein MIMGU_mgv1a003249mg [Erythranthe guttata]
JMSF013C17Sequence442003913 (7)ref|XP_006339100.1|6e-15PREDICTED: threonine dehydratase biosynthetic, chloroplastic-like [Solanum tube758005370 (6)ref|XP_009593672.1|4e-88PREDICTED: threonine dehydratase biosynthetic, chloroplastic [Nicotiana tomento
JMSF013P20Sequence253003913 (7)789005370 (6)ref|XP_009593672.1|9e-101PREDICTED: threonine dehydratase biosynthetic, chloroplastic [Nicotiana tomento
JMSF051I15Sequence662003913 (7)ref|XP_006339100.1|5e-63PREDICTED: threonine dehydratase biosynthetic, chloroplastic-like [Solanum tube724005370 (6)gb|EYU41567.1|4e-79hypothetical protein MIMGU_mgv1a003249mg [Erythranthe guttata]
JMSF051P13Sequence659003913 (7)ref|XP_006339100.1|3e-63PREDICTED: threonine dehydratase biosynthetic, chloroplastic-like [Solanum tube618008688 (18)ref|XP_006436065.1|2e-57hypothetical protein CICLE_v10032980mg [Citrus clementina] ref|XP_006436066.1| h
JMSF053M05Sequence661003913 (7)ref|XP_006339100.1|5e-63PREDICTED: threonine dehydratase biosynthetic, chloroplastic-like [Solanum tube869005370 (6)ref|XP_009593672.1|6e-118PREDICTED: threonine dehydratase biosynthetic, chloroplastic [Nicotiana tomento

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF051P13+ T
JMSF053M05+ T
JMSF051I15+ CT
                      ____________________________________________________________
consensus CT
 
. : . : . : . : . : . :
JMSF051P13+ CAGGTGTAGTAACAGGCATTACAATCACAGCATCACACCCAAGTTTCTGTGCAGATAGAG
JMSF053M05+ CAGGTGTAGTAACAGGCATTACAATCACAGCATCACACCCAAGTTTCTGTGCAGATAGAG
JMSF051I15+ CAGGTGTAGTAACAGGCATTACAATCACAGCATCACACCCAAGTTTCTGTGCAGATAGAG
                      ____________________________________________________________
consensus CAGGTGTAGTAACAGGCATTACAATCACAGCATCACACCCAAGTTTCTGTGCAGATAGAG
 
. : . : . : . : . : . :
JMSF051P13+ CAACCCCTTGGGCATGATTACCAGCAGATGAACAGATAACTCCTCTATCCAATACCTCCC
JMSF053M05+ CAACCCCTTGGGCATGATTACCAGCAGATGAACAGATAACTCCTCTATCCAATACCTCCC
JMSF051I15+ CAACCCCTTGGGCATGATTACCAGCAGATGAACAGATAACTCCTCTATCCAATACCTCCC
                      ____________________________________________________________
consensus CAACCCCTTGGGCATGATTACCAGCAGATGAACAGATAACTCCTCTATCCAATACCTCCC
 
. : . : . : . : . : . :
JMSF051P13+ TTGGGAGTTTAGCCATCATATTATAAGCTCCTCGAAGTTTGAATGAGAAGACAGGTTGAA
JMSF053M05+ TTGGGAGTTTAGCCATCATATTATAAGCTCCTCGAAGTTTGAATGAGAAGACAGGTTGAA
JMFF026K13+ TGGGAGTTTAGCCATCATATTATAAGCTCCTCGAAGTTTGAATGAGAAGACAGGTTGAA
JMSF051I15+ TTGGGAGTTTAGCCATCATATTATAAGCTCCTCGAAGTTTGAATGAGAAGACAGGTTGAA
                      ____________________________________________________________
consensus TTGGGAGTTTAGCCATCATATTATAAGCTCCTCGAAGTTTGAATGAGAAGACAGGTTGAA
 
. : . : . : . : . : . :
JMSF051P13+ GATCCTCCCTTTTGAGCCAGATTTTGTTCCCCAGCCTCGCCGTGAGCTTCGAGGCGAGTT
JMSF053M05+ GATCCTCCCTTTTGAGCCAGATTTTGTTCCCCAGCCTCGCCGTGAGCTTCGAGGCGAGTT
JMSF013C17+ CTCGCCGTGAGCTTCGAGGCGAGTT
JMFF026K13+ GATCCTCCCTTTTGAGCCAGATTTTGTTCCCCAGCCTCGCCGTGAGCTTCGAGGCGAGTT
JMSF051I15+ GATCCTCCCTTTTGAGCCAGATTTTGTTCCCCAGCCTCGCCGTGAGCTTCGAGGCGAGTT
                      ____________________________________________________________
consensus GATCCTCCCTTTTGAGCCAGATTTTGTTCCCCAGCCTCGCCGTGAGCTTCGAGGCGAGTT
 
. : . : . : . : . : . :
JMSF051P13+ GCAACGGCGACTCAAAAGCTACATCGTATACCTTAGATGACAGTATCGCGGTCAAATACT
JMSF053M05+ GCAACGGCGACTCAAAAGCTACATCGTATACCTTAGATGACAGTATCGCGGTCAAATACT
JMSF013C17+ GCAACGGCGACTCAAAAGCTACATCGTATACCTTAGATGACAGTATCGCGGTCAAATACT
JMFF012L14+ AAAGCTACATCGTATACCTTAGATGACAGTATCGCGGTCAAATACT
JMFF026K13+ GCAACGGCGACTCAAAAGCTACATCGTATACCTTAGATGACAGTATCGCGGTCAAATACT
JMSF051I15+ GCAACGGCGACTCAAAAGCTACATCGTATACCTTAGATGACAGTATCGCGGTCAAATACT
                      ____________________________________________________________
consensus GCAACGGCGACTCAAAAGCTACATCGTATACCTTAGATGACAGTATCGCGGTCAAATACT
 
. : . : . : . : . : . :
JMSF051P13+ CTACAGCTCTGTAGCTATAGGACTCATTTCCATCGTGGCAAGCGAGATTCGGAATAACGC
JMSF053M05+ CTACAGCTCTGTAGCTATAGGACTCATTTCCATCGTGGCAAGCGAGATTCGGAATAACGC
JMSF013C17+ CTACAGCTCTGTAGCTATAGGACTCATTTCCATCGTGGCAAGCGAGATTCGGAATAACGC
JMFF012L14+ CTACAGCTCTGTAGCTATAGGACTCATTTCCATCGTGGCAAGCGAGATTCGGAATAACGC
JMFF026K13+ CTACAGCTCTGTAGCTATAGGACTCATTTCCATCGTGGCAAGCGAGATTCGGAATAACGC
JMSF051I15+ CTACAGCTCTGTAGCTATAGGACTCATTTCCATCGTGGCAAGCGAGATTCGGAATAACGC
                      ____________________________________________________________
consensus CTACAGCTCTGTAGCTATAGGACTCATTTCCATCGTGGCAAGCGAGATTCGGAATAACGC
 
. : . : . : . : . : . :
JMSF051P13+ ATCCAGGCTCACTGGTCAAGGAGCCCGGAGACACTACCGGCAATTCAGGCCGCGTCGCAG
JMSF053M05+ ATCCAGGCTCACTGGTCAAGGAGCCCGGAGACACTACCGGCAATTCAGGCCGCGTCGCAG
JMSF013C17+ ATCCAGGCTCACTGGTCAAGGAGCCCGGAGACACTACCGGCAATTCAGGCCGCGTCGCAG
JMFF012L14+ ATCCAGGCTCACTGGTCAAGGAGCCCGGAGACACTACCGGCAATTCAGGCCGCGTCGCAG
JMSF013P20+ TCAGGCCGCGTCGCAG
JMFF026K13+ ATCCAGGCTCACTGGTCAAGGAGCCCGGAGACACTACCGGCAATTCAGGCCGCGTCGCAG
JMSF051I15+ ATCCAGGCTCACTGGTCAAGGAGCCCGGAGACACTACCGGCAATTCAGGCCGCGTCGCAG
                      ____________________________________________________________
consensus ATCCAGGCTCACTGGTCAAGGAGCCCGGAGACACTACCGGCAATTCAGGCCGCGTCGCAG
 
. : . : . : . : . : . :
JMSF051P13+ GCCGCAACTGCTTCTCGGCGGCTGTGGACGTGGCGGACAAAACCTGCGCCTCCGGCCTCG
JMSF053M05+ GCCGCAACTGCTTCTCGGCGGCTGTGGACGTGGCGGACAAAACCTGCGCCTCCGGCCTCG
JMSF013C17+ GCCGCAACTGCTTCTCGGCGGCTGTGGACGTGGCGGACAAAACCTGCGCCTCCGGCCTCG
JMFF012L14+ GCCGCAACTGCTTCTCGGCGGCTGTGGACGTGGCGGACAAAACCTGCGCCTCCGGCCTCG
JMSF013P20+ GCCGCAACTGCTTCTCGGCGGCTGTGGACGTGGCGGACAAAACCTGCGCCTCCGGCCTCG
JMFF026K13+ GCCGCAACTGCTTCTCGGCGGCTGTGGACGTGGCGGACAAAACCTGCGCCTCCGGCCTCG
JMSF051I15+ GCCGCAACTGCTTCTCGGCGGCTGTGGACGTGGCGGACAAAACCTGCGCCTCCGGCCTCG
                      ____________________________________________________________
consensus GCCGCAACTGCTTCTCGGCGGCTGTGGACGTGGCGGACAAAACCTGCGCCTCCGGCCTCG
 
. : . : . : . : . : . :
JMSF051P13+ AGAGCGCAGCGCGAATTGAAGCTCCGCTAGTCGCTCTCCTTACATCGGCGGCCTTGACGG
JMSF053M05+ AGAGCGCAGCGCGAATTGAAGCTCCGCTAGTCGCTCTCCTTACATCGGCGGCCTTGACGG
JMSF013C17+ AGAGCGCAGCGCGAATTGAAGCTCCGCTAGTCGCTCTCCTTACATCGGCGGCCTTGACGG
JMFF012L14+ AGAGCGCAGCGCGAATTGAAGCTCCGCTAGTCGCTCTCCTTACATCGGCGGCCTTGACGG
JMSF013P20+ AGAGCGCAGCGCGAATTGAAGCTCCGCTAGTCGCTCTCCTTACATCGGCGGCCTTGACGG
JMFF026K13+ AGAGCGCAGCGCGAATTGAAGCTCCGCTAGTCGCTCTCCTTACATCGGCGGCCTTGACGG
JMSF051I15+ AGAGCGCAGCGCGAATTGAAGCTCCGCTAGTCGCTCTCCTTACATCGGCGGCCTTGACGG
                      ____________________________________________________________
consensus AGAGCGCAGCGCGAATTGAAGCTCCGCTAGTCGCTCTCCTTACATCGGCGGCCTTGACGG
 
. : . : . : . : . : . :
JMSF051P13+ TGTAATTGGGAGCAATGGCAGCGGCCGGCGGCACGGGCTTGCACCGGAGATTGGGAGATT
JMSF053M05+ TGTAATTGGGAGCAATGGCAGCGGCCGGCGGCACGGGCTTGCACCGGAGATTGGGAGATT
JMSF013C17+ TGTAATTGGGAGCAATGGCAGCGGCCGGCGGCACGGGCTTGCACCGGAGATTGGGAGATT
JMFF012L14+ TGTAATTGGGAGCAATGGCAGCGGCCGGCGGCACGGGCTTGCACCGGAGATTGGGAGATT
JMSF013P20+ TGTAATTGGGAGCAATGGCAGCGGCCGGCGGCACGGGCTTGCACCGGAGATTGGGAGATT
JMFF026K13+ TGTAATTGGGAGCAATGGCAGCGGCCGGCGGCACGGGCTTGCACCGGAGATTGGGAGATT
JMSF051I15+ TGTAATTGGGAGCAATGGCAGCGGCCGGCGGCACGGGCTTGCACCGGAGATTGGGAGATT
                      ____________________________________________________________
consensus TGTAATTGGGAGCAATGGCAGCGGCCGGCGGCACGGGCTTGCACCGGAGATTGGGAGATT
 
. : . : . : . : . : . :
JMSF051P13+ GTGTACTGGCGAAACGGAGAACGTCCATGGCGGCCTGGGAGTGGTCAAGGAAGCAG
JMSF053M05+ GTGTACTGGCGAAACGGAGAACGTCCATGGCGGCCTGGGAGTGGTCAAGGAAGCAG
JMSF013C17+ GTGTACTGGCGAAACGGAGAACGTCCATGGCGGCCTGGGAGTGGTCAAGGAAGCAG
JMFF012L14+ GTGTACTGGCGAAACGGAGAACGTCCATGGCGGCCTGGGAGTGGTCAAGGAAGCAG
JMSF013P20+ GTGTACTGGCGAAACGGAGAACGTCCATGGCGGCCTGGGAGTGGTCAAGGAAGCAG
JMFF026K13+ GTGTACTGGCGAAACGGAGAACGTCCATGGCGGCCTGGGAGTGGTCAAGGAAGCAG
JMSF051I15+ GTGTACTGGCGAAACGGAGAACGTCCATGGCGGCCTGGGAGTGGTCAAGGAAGCAGGGCC
                      ____________________________________________________________
consensus GTGTACTGGCGAAACGGAGAACGTCCATGGCGGCCTGGGAGTGGTCAAGGAAGCAGGGCC