Contig 003898:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF030C12Sequence634003898 (2)ref|XP_009607626.1|9e-72PREDICTED: probable beta-1,4-xylosyltransferase IRX10L [Nicotiana tomentosiform736012772 (2)ref|XP_011082884.1|1e-132PREDICTED: probable beta-1,4-xylosyltransferase IRX10L [Sesamum indicum]
JMSF049M11Sequence651003898 (2)ref|XP_009607626.1|1e-62PREDICTED: probable beta-1,4-xylosyltransferase IRX10L [Nicotiana tomentosiform735012772 (2)ref|XP_011082884.1|2e-123PREDICTED: probable beta-1,4-xylosyltransferase IRX10L [Sesamum indicum]

Alignment

This contig is upended


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JMSF030C12+                                             TGCGGGGTGACTTAAAGGGTAAAGGA
                      ____________________________________________________________
consensus                                               TGCGGGGTGACTTAAAGGGTAAAGGA
 
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JMSF030C12+           AGGCCATTTGGCGTGAGGTCACAAGTGGTGTACACTGGAGTGTAAAACCAATCAGCTTCC
JMSF049M11+                    GGCGTGAGGTCACAAGTGGTGTACACTGGAGTGTAAAACCAATCAGCTTCC
                      ____________________________________________________________
consensus             AGGCCATTTGGCGTGAGGTCACAAGTGGTGTACACTGGAGTGTAAAACCAATCAGCTTCC
 
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JMSF030C12+           TCGGGATTAAGGGTACGAACGGGGCTGGATAAAAGGAACCGATGCATATAAATCTCAGCA
JMSF049M11+           TCGGGATTAAGGGTACGAACGGGGCTGGATAAAAGGAACCGATGCATATAAATCTCAGCA
                      ____________________________________________________________
consensus             TCGGGATTAAGGGTACGAACGGGGCTGGATAAAAGGAACCGATGCATATAAATCTCAGCA
 
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JMSF030C12+           GCAAACATGTGGTTAAGGCATCGTTGATCCTTCTGGAGAATTTTCTTGTTATATTTGCTT
JMSF049M11+           GCAAACATGTGGTTAAGGCATCGTTGATCCTTCTGGAGAATTTTCTTGTTATATTTGCTT
                      ____________________________________________________________
consensus             GCAAACATGTGGTTAAGGCATCGTTGATCCTTCTGGAGAATTTTCTTGTTATATTTGCTT
 
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JMSF030C12+           GGAAGCTCATATACAAAAACTTTTAGCCTTCCAACTGGATCATCTTCCAACACATCACCA
JMSF049M11+           GGAAGCTCATATACAAAAACTTTTAGCCTTCCAACTGGATCATCTTCCAACACATCACCA
                      ____________________________________________________________
consensus             GGAAGCTCATATACAAAAACTTTTAGCCTTCCAACTGGATCATCTTCCAACACATCACCA
 
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JMSF030C12+           GCACTACCTTCTATTCTCTCAGTGTGATGACTCCTATGAAACTTGAAAGCTCCAATTCCC
JMSF049M11+           GCACTACCTTCTATTCTCTCAGTGTGATGACTCCTATGAAACTTGAAAGCTCCAATTCCC
                      ____________________________________________________________
consensus             GCACTACCTTCTATTCTCTCAGTGTGATGACTCCTATGAAACTTGAAAGCTCCAATTCCC
 
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JMSF030C12+           AGTACAGAAGCAAGATAAAGAAGTAACACAAAACCCAATCTGCAATTCCTCATTCTCAAT
JMSF049M11+           AGTACAGAAGCAAGATAAAGAAGTAACACAAAACCCAATCTGCAATTCCTCATTCTCAAT
                      ____________________________________________________________
consensus             AGTACAGAAGCAAGATAAAGAAGTAACACAAAACCCAATCTGCAATTCCTCATTCTCAAT
 
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JMSF030C12+           CCAAATCTGAAGGAAGGTAAATCAGACGAACTCCCAAAATAAATAAATAAAATATTGAGG
JMSF049M11+           CCAAATCTGAAGGAAGGTAAATCAGACGAACTCCCAAAATAAATAAATAAAATATTGAGG
                      ____________________________________________________________
consensus             CCAAATCTGAAGGAAGGTAAATCAGACGAACTCCCAAAATAAATAAATAAAATATTGAGG
 
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JMSF030C12+           GAGAGAGAGAGAGAGATCAAAGAAGCTTGAAGGATAATCTACTGAGGAACAAATTGCATT
JMSF049M11+           GAGAGAGAGAGAGAGATCAAAGAAGCTTGAAGGATAATCTACTGAGGAACAAATTGCATT
                      ____________________________________________________________
consensus             GAGAGAGAGAGAGAGATCAAAGAAGCTTGAAGGATAATCTACTGAGGAACAAATTGCATT
 
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JMSF030C12+           AAAGATTAGGGGAACGAAGACACGGTTGGAATGCCAATATAAACGTAGTTGTCTCAAAGA
JMSF049M11+           AAAGATTAGGGGAACGAAGACACGGTTGGAATGCCAATATAAACGTAGTTGTCTCAAAGA
                      ____________________________________________________________
consensus             AAAGATTAGGGGAACGAAGACACGGTTGGAATGCCAATATAAACGTAGTTGTCTCAAAGA
 
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JMSF030C12+           TTTATCTAGAAAACTGGGATTTTCCCAAGACAGCTCAAAAAATGTTTAGAAATCTTGGAA
JMSF049M11+           TTTATCTAGAAAACTGGGATTTTCCCAAGACAGCTCAAAAAATGTTTAGAAATCTTGGAA
                      ____________________________________________________________
consensus             TTTATCTAGAAAACTGGGATTTTCCCAAGACAGCTCAAAAAATGTTTAGAAATCTTGGAA
 
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JMSF030C12+           AATGCAT                                                     
JMSF049M11+           AATGCATTGTTTTGGTGGGGGGAAACTGGGAATAAATGGAGAACTGAGTGTACTTCGACC
                      ____________________________________________________________
consensus             AATGCATTGTTTTGGTGGGGGGAAACTGGGAATAAATGGAGAACTGAGTGTACTTCGACC