Contig 003897:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF021E10Sequence695003897 (2)gb|EPS61452.1|1e-20hypothetical protein M569_13344, partial [Genlisea aurea]728015027ref|XP_009787852.1|4e-50PREDICTED: cleavage and polyadenylation specificity factor subunit 3-I-like [Ni
JMSF049L12Sequence654003897 (2)ref|XP_009799354.1|4e-73PREDICTED: magnesium transporter MRS2-4-like [Nicotiana sylvestris] ref|XP_00979747010101 (2)ref|XP_009602807.1|5e-99PREDICTED: magnesium transporter MRS2-4 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMSF021E10+                                                      CGGAAGAACCTCTTGAC
                      ____________________________________________________________
consensus                                                        CGGAAGAACCTCTTGAC
 
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JMSF021E10+           GCAGAGGTTCAAGCAACAAAAGTTCTTCAGAAGTTATTATAGCTCTTACAAACTCTAAGT
                      ____________________________________________________________
consensus             GCAGAGGTTCAAGCAACAAAAGTTCTTCAGAAGTTATTATAGCTCTTACAAACTCTAAGT
 
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JMSF021E10+           AAATAACTAAACCCAATCAAAAACAACTCTTCTAACTCATCNTAAGCACAGTGATATTAT
                      ____________________________________________________________
consensus             AAATAACTAAACCCAATCAAAAACAACTCTTCTAACTCATCNTAAGCACAGTGATATTAT
 
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JMSF021E10+           AAAGTAGTTGAGTATTTTTATATATAGACAATTATTACAGAAAAGAAACAGAAATGAGTG
                      ____________________________________________________________
consensus             AAAGTAGTTGAGTATTTTTATATATAGACAATTATTACAGAAAAGAAACAGAAATGAGTG
 
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JMSF021E10+           CATTCATGAGTTCTGTATCTAACACACCAATAGCAATGACTCCAGATTGCATAATTAATT
                      ____________________________________________________________
consensus             CATTCATGAGTTCTGTATCTAACACACCAATAGCAATGACTCCAGATTGCATAATTAATT
 
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JMSF021E10+           TGGTTATGAGATTCTTACATAGGTAAAGCATCAAACCCTACCTAACAACCTTTGCATATA
                      ____________________________________________________________
consensus             TGGTTATGAGATTCTTACATAGGTAAAGCATCAAACCCTACCTAACAACCTTTGCATATA
 
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JMSF021E10+           GAATTGCAGGAATTCAATGGTGGAAAGCATGCATCACCAAATTCATAGCAAGCACTGGAT
                      ____________________________________________________________
consensus             GAATTGCAGGAATTCAATGGTGGAAAGCATGCATCACCAAATTCATAGCAAGCACTGGAT
 
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JMSF021E10+           CAAAATATGCAAACACATTGTATTTACCGACATTCACATATAGGTAGGGAGAGAGAGAGA
                      ____________________________________________________________
consensus             CAAAATATGCAAACACATTGTATTTACCGACATTCACATATAGGTAGGGAGAGAGAGAGA
 
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JMSF021E10+           GAGTACGAAGGATACTGGAGGAGTGAGAGAATATAGGGCCGAGGATCCTCAAGTCCCTAG
JMSF049L12+                  AAGGATACTGGAGGAGTGAGAGAATATAGGACCGAGGATCCTCAAGTCCCTAG
                      ____________________________________________________________
consensus             GAGTACGAAGGATACTGGAGGAGTGAGAGAATATAGGGCCGAGGATCCTCAAGTCCCTAG
 
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JMSF021E10+           CAGGAATGGAGGCGCGTTTGATGATAGAGTTCTTATCGCACTCCATCAGCTCCGACTGCC
JMSF049L12+           CAGGAATGGAGGCGCGCTTGATGATAGAGCTCTTATCGCACTCCATCAGCTCCGATTGCC
                      ____________________________________________________________
consensus             CAGGAATGGAGGCGCGTTTGATGATAGAGTTCTTATCGCACTCCATCAGCTCCGATTGCC
 
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JMSF021E10+           CCGTCCTGTCAAACCTCATTCACAGCCTGGCCCCAGCCGCCTTCTTCTTCCCGGGCTTGC
JMSF049L12+           CCGTCCTGTCAAACCTCATCCACAGCCTGGCCCCAACCGCCTTCTTCTTCCCGGGCTTGC
                      ____________________________________________________________
consensus             CCGTCCTGTCAAACCTCATTCACAGCCTGGCCCCAGCCGCCTTCTTCTTCCCGGGCTTGC
 
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JMSF021E10+           TCGTTCCCGCACTCGACGCCAGCAAACTCCCGCCG                         
JMSF049L12+           TCGTCCCCGCACTGGACGCGACCAAAATCCCGCCGACGTTGCCGGAGGCTTGCTCCAATA
                      ____________________________________________________________
consensus             TCGTTCCCGCACTGGACGCGAGCAAACTCCCGCCGACGTTGCCGGAGGCTTGCTCCAATA
 
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JMSF049L12+           CAGGAGTCGGCCTCGGCGACGTCACCGCCGCCGGCGCCGCTTTCTTCCTCCGCCGCAGCG
                      ____________________________________________________________
consensus             CAGGAGTCGGCCTCGGCGACGTCACCGCCGCCGGCGCCGCTTTCTTCCTCCGCCGCAGCG
 
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JMSF049L12+           AGAATCGGCCCTTCCCCATCTCCCTCCCAACGGCCTCAACGTCTTTCTGCAAGCCGCATA
                      ____________________________________________________________
consensus             AGAATCGGCCCTTCCCCATCTCCCTCCCAACGGCCTCAACGTCTTTCTGCAAGCCGCATA
 
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JMSF049L12+           CGTATCGTTAACCCACTTGAACTCGATCGACGAAGTCCTCTTCTTCCTCTTCTTCTTCCC
                      ____________________________________________________________
consensus             CGTATCGTTAACCCACTTGAACTCGATCGACGAAGTCCTCTTCTTCCTCTTCTTCTTCCC