Contig 003896:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF014F11Sequence508003896 (2)ref|XP_009778400.1|2e-46PREDICTED: cyprosin-like isoform X1 [Nicotiana sylvestris]806007239 (2)ref|XP_009616098.1|1e-78PREDICTED: cyprosin-like [Nicotiana tomentosiformis]
JMSF049K24Sequence693003896 (2)ref|XP_009778402.1|7e-44PREDICTED: cyprosin-like isoform X2 [Nicotiana sylvestris] ref|XP_009778403.1| P707007239 (2)ref|XP_009616098.1|1e-66PREDICTED: cyprosin-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMSF014F11+                                                             CCAGATAACG
JMSF049K24+                                      TGACATGGTCTNGGCTAAAGAACCCAGATAACG
                      ____________________________________________________________
consensus                                        TGACATGGTCTNGGCTAAAGAACCCAGATAACG
 
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JMSF014F11+           ACCCAGAGCCATAAGGAATTTTGCAAGATTTTCCGATTTTGGTGTATGTTCTCGATAGTC
JMSF049K24+           ACCNAGAGCCATAAGGAATTTTGCAAGATTTTCCGATTTTGGTGTATGTTCTCGATAGTC
                      ____________________________________________________________
consensus             ACCCAGAGCCATAAGGAATTTTGCAAGATTTTCCGATTTTGGTGTATGTTCTCGATAGTC
 
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JMSF014F11+           TTGATCTGTATCTAGAATGTAGATGACATGAAATGGAAAAAAAGCATTTTGAAGAAGGGA
JMSF049K24+           TTGATCTGTATCTAGAATGTAGATGACATGAAATGGAAAAAAAGCATTTTGAAGAAGGGA
                      ____________________________________________________________
consensus             TTGATCTGTATCTAGAATGTAGATGACATGAAATGGAAAAAAAGCATTTTGAAGAAGGGA
 
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JMSF014F11+           CCCAAAGATTGGAACTTCCAGTATCGAAGACAACACTGAAGCGTTGTGGGGGTGTGCCAA
JMSF049K24+           CCCAAAGATTGGAACTTCCAGTATCGAAGACAACACTGAAGCGTTGTGGGGGTGTGCCAA
                      ____________________________________________________________
consensus             CCCAAAGATTGGAACTTCCAGTATCGAAGACAACACTGAAGCGTTGTGGGGGTGTGCCAA
 
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JMSF014F11+           TGCCAATCTCCCCATAGTATTGAACATCCAAATAGTCTTTCAAATATACAAATTGTTCAT
JMSF049K24+           TGCCAATCTCCCCATAGTATTGAACATCCAAATAGTCTTTCAAATATACAAATTGTTCAT
                      ____________________________________________________________
consensus             TGCCAATCTCCCCATAGTATTGAACATCCAAATAGTCTTTCAAATATACAAATTGTTCAT
 
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JMSF014F11+           TAAGAGAACCCGAATTAATGTTACCATCCAACTGATTACTATTGTAGAATCTCGCATCCT
JMSF049K24+           TAAGAGAACCCGAATTAATGTTACCATCCAACTGATTACTATTGTAGAATCTCGCATCCT
                      ____________________________________________________________
consensus             TAAGAGAACCCGAATTAATGTTACCATCCAACTGATTACTATTGTAGAATCTCGCATCCT
 
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JMSF014F11+           TTAAACTGTTTAGGTCCAAAGTTCGCCTCTTTAATCCAACCCTCACTGTTCCATCAGCAG
JMSF049K24+           TTAAACTGTTTAGGTCCAAAGTTCGCCTCTTTAATCCAACCCTCACTGTTCCATCAGCAG
                      ____________________________________________________________
consensus             TTAAACTGTTTAGGTCCAAAGTTCGCCTCTTTAATCCAACCCTCACTGTTCCATCAGCAG
 
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JMSF014F11+           ACACATTGAAGCCAGATGCGTATGCCACATCCCACATTAAAAATGCAAGAATTAGAATTT
JMSF049K24+           ACACATTGAAGCCAGATGCGTATGCCACATCCCACATTAAAAATGCAAGAATTAGAATTT
                      ____________________________________________________________
consensus             ACACATTGAAGCCAGATGCGTATGCCACATCCCACATTAAAAATGCAAGAATTAGAATTT
 
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JMSF014F11+           TTATTCCCATTCCTCACAACGACAAGCCCTCTTAGAGAAGATGAAGCAAGAATTGCAGGT
JMSF049K24+           TTATTCCCATTCCTCACAACGACAAGCCCTCTTAGAGAAGATGAAGCAAGAATTGCAGGT
                      ____________________________________________________________
consensus             TTATTCCCATTCCTCACAACGACAAGCCCTCTTAGAGAAGATGAAGCAAGAATTGCAGGT
 
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JMSF014F11+           GGTGTAAGCAAGAGAGC                                           
JMSF049K24+           GGTGTAAGCAAGAGAGCAACTGCAAATACCCAATCTTTCGCAAGATATAATGAATTGAAG
                      ____________________________________________________________
consensus             GGTGTAAGCAAGAGAGCAACTGCAAATACCCAATCTTTCGCAAGATATAATGAATTGAAG
 
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JMSF049K24+           CAACCCAAAAGTGATATTCTCGAAGAAGCCGCCTTGCAGTTTCGCGCGAAATTGCCGGAA
                      ____________________________________________________________
consensus             CAACCCAAAAGTGATATTCTCGAAGAAGCCGCCTTGCAGTTTCGCGCGAAATTGCCGGAA
 
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JMSF049K24+           ATCATACCACTACGGCATATTCAATTCATGCAAGTGAAGATCAAAGAGTACTGCCCGGCA
                      ____________________________________________________________
consensus             ATCATACCACTACGGCATATTCAATTCATGCAAGTGAAGATCAAAGAGTACTGCCCGGCA