Contig 003893:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF049C22+                                   ATGTTTATACTATATATAAGCTGATGTATAATATAT
                      ____________________________________________________________
consensus                                     ATGTTTATACTATATATAAGCTGATGTATAATATAT
 
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JMSF027C22+                      AAGAAAATAAAAAACAAAATTATAATATTATACCTGTAAATTAAATGAT
JMSF049C22+           ATATACGCNCGAAGAAAATAAAAAACAAAATTATAATACTATACCTGTAAATTAAATGAT
                      ____________________________________________________________
consensus             ATATACGCNCGAAGAAAATAAAAAACAAAATTATAATATTATACCTGTAAATTAAATGAT
 
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JMSF027C22+           CCTCTTCTATTTGGAGCAACTCATATCTTCTCAATTACATTTTTCCAACTAGATCTCAAC
JMSF049C22+           CCTCTTCTATTTGGAGCAACTCATATCTTCTCAATTACATTTTTCCAACTAGATCTCAAC
                      ____________________________________________________________
consensus             CCTCTTCTATTTGGAGCAACTCATATCTTCTCAATTACATTTTTCCAACTAGATCTCAAC
 
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JMSF027C22+           CTTCATAAATAAAATAAAAACAACAATCAGAATTTTAACAATTTTCTGTAAATAATAAAA
JMSF049C22+           CTTCATAAATAAAATAAAAACAACAATCAGAATTTTAACAATTTTCTGTAAATAATAAAA
                      ____________________________________________________________
consensus             CTTCATAAATAAAATAAAAACAACAATCAGAATTTTAACAATTTTCTGTAAATAATAAAA
 
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JMSF027C22+           AAATTTGAAGGTTGAGGTAGATCAAAATACAGATTATAAATACAATTACAAAATAGCTTT
JMSF049C22+           AAATTTGAAGGTTGAGGTAGATCAAAATACAGATTATAAATACAATTACAAAATAGCTTT
                      ____________________________________________________________
consensus             AAATTTGAAGGTTGAGGTAGATCAAAATACAGATTATAAATACAATTACAAAATAGCTTT
 
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JMSF027C22+           AACATAGGAAAGATCTATGGTAGTTATAAGGAAGAAGTCACTTATCTGATCTATATAAGC
JMSF049C22+           AACATAGGAAAGATCTATGGTAGTTATAAGGAAGAAGTCACTTATCTGATCTATATAAGC
                      ____________________________________________________________
consensus             AACATAGGAAAGATCTATGGTAGTTATAAGGAAGAAGTCACTTATCTGATCTATATAAGC
 
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JMSF027C22+           GAAGTCAAATTCGAATGATCAATACAACAAATCCGATCGAATCAGAAAACACTGTACATC
JMSF049C22+           GAAGTCAAATTCGAATGATCAATACAACAAATCCTATCGAATCAGAAAACACTGTACATC
                      ____________________________________________________________
consensus             GAAGTCAAATTCGAATGATCAATACAACAAATCCTATCGAATCAGAAAACACTGTACATC
 
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JMSF027C22+           AGGATGTAGATAGACAGTTGGTCGAACAATCTTGACATAGATTACCGAAGAATATGCATG
JMSF049C22+           AGGATGTAGATAGACAGTTGGTCGAACAATCTTGACATAGATTACCGAAGAATATGCATG
                      ____________________________________________________________
consensus             AGGATGTAGATAGACAGTTGGTCGAACAATCTTGACATAGATTACCGAAGAATATGCATG
 
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JMSF027C22+           CATTCATATTTGGTGAACAAAGGACAATTTTGCGAAGTCGCTGGAGATCGCAACATTGGA
JMSF049C22+           CATTCATATTTGGTGAACAAAGGACAATTTTGCGAAGTCGCTGGAGATCGCAACATTGGA
                      ____________________________________________________________
consensus             CATTCATATTTGGTGAACAAAGGACAATTTTGCGAAGTCGCTGGAGATCGCAACATTGGA
 
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JMSF027C22+           AGAGACAAACGGATCGCGAAGAGATCGCTGATGTACGGAAAAGATAATCAGGCAAGTTAG
JMSF049C22+           AGAGACAAACGGATCGCGAAGAGATCGCTGATGTACGGAAAAGATAATCAGGCAAGTTAG
                      ____________________________________________________________
consensus             AGAGACAAACGGATCGCGAAGAGATCGCTGATGTACGGAAAAGATAATCAGGCAAGTTAG
 
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JMSF027C22+           AAGAGAGAAGCAGGCGATCGCTATTTCGGAGGACAGAAGAGAGAAAAACAAGGGTTGCAG
JMSF049C22+           AAGAGAGAAGCAGGCGATCGCTATTTCGGAGGACAGAAGAGAGAAAAACAAGGGTTGCAG
                      ____________________________________________________________
consensus             AAGAGAGAAGCAGGCGATCGCTATTTCGGAGGACAGAAGAGAGAAAAACAAGGGTTGCAG
 
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JMSF027C22+           CCGTTCTTAGATTTCAGACAAATTTTTGATCTACCAAATGTTTCAAACCTAAATGTT   
JMSF049C22+           CCGTTCTTAGATTTCAGACAAATTTTTGATCTACCAAATGTTTCAAACCTAAATGTTTCC
                      ____________________________________________________________
consensus             CCGTTCTTAGATTTCAGACAAATTTTTGATCTACCAAATGTTTCAAACCTAAATGTTTCC