Contig 003888:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS100E06+                                   GAAAATGCCATTCATTGGCATGAAGATCCGTAGAAA
                      ____________________________________________________________
consensus                                     GAAAATGCCATTCATTGGCATGAAGATCCGTAGAAA
 
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JMFS100E06+           CCAATTCCTGCCACGGTGGCTGTTGAGACATATCCAGTGGGGGCAAACACTCATCTGCAT
                      ____________________________________________________________
consensus             CCAATTCCTGCCACGGTGGCTGTTGAGACATATCCAGTGGGGGCAAACACTCATCTGCAT
 
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JMFS100E06+           GCCGCCGAAGAACAGAGAATCCACCATGGGTGCTTGTATCAGATGCAGTGAGTGTCTTGC
                      ____________________________________________________________
consensus             GCCGCCGAAGAACAGAGAATCCACCATGGGTGCTTGTATCAGATGCAGTGAGTGTCTTGC
 
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JMFS100E06+           AAAATGAATGGACATTACATTGTTCTGGTTCAGGGAGAGGAGGATCAGGGCTTGTGATCT
                      ____________________________________________________________
consensus             AAAATGAATGGACATTACATTGTTCTGGTTCAGGGAGAGGAGGATCAGGGCTTGTGATCT
 
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JMFS100E06+           CACTTTGCTCTGGTTCAGGAAGCAGAGTTATTTGAGCATACACCTCATCTGTCTCAGGTT
JMFS068H05+                                                     CCTCATCTGTCTCAGGTT
                      ____________________________________________________________
consensus             CACTTTGCTCTGGTTCAGGAAGCAGAGTTATTTGAGCATACACCTCATCTGTCTCAGGTT
 
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JMFS100E06+           CAGCCCGAAGAAAAACATTCATAACTTTGCACAGAATCTTAGCTGGCAAGTCAAATGAAG
JMSF003N10+                                                                  TGAAG
JMFS068H05+           CAGCCCGAAGAAAAACATTCATAACTTTGCACAGAATCTTAGCTGGCAAGTCAAATGAAG
JMSF048K08+                        AACATTCATAACTTTGCACAGAATCTTAGCTGGCAAGTCAAATGAAG
                      ____________________________________________________________
consensus             CAGCCCGAAGAAAAACATTCATAACTTTGCACAGAATCTTAGCTGGCAAGTCAAATGAAG
 
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JMFS100E06+           GAAGCTGCTGATCAAATCCCTGATGAGTGGATGCTTCAAGCTGTTCCATATGACCTTGTG
JMSF003N10+           GAAGCTGCTGATCCAATCCCTGATGAGTGGATGCTTCNAGCTGTTCCATATGACCTTGTG
JMFS068H05+           GAAGCTGCTGATCCAATCCCTGATGAGTGGATGCTTCAAGCTGTTCCATATGACCTTGTG
JMSF048K08+           GAAGCTGCTGATCCAATCCCTGATGAGTGGATGCTTCAAGCTGTTCCATATGACCTTGTG
                      ____________________________________________________________
consensus             GAAGCTGCTGATCCAATCCCTGATGAGTGGATGCTTCAAGCTGTTCCATATGACCTTGTG
 
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JMFS100E06+           GAAAATAATAAACCCTTTCTCCTTCCCGTGGAAGTGTCACAAGTGGTCCAGCACAAGCAT
JMSF003N10+           GAAAATAATAAACCCTTTCTCCTTCCCGTGGAAGTGTCACAAGTGGTCCAGCACAAGCAT
JMFS068H05+           GAAAATAATAAACCCTTTCTCCTTCCCGTGGAAGTGTCACAAGTGGTCCAGCACAAGCAT
JMSF048K08+           GAAAATAATAAACCCTTTCTCCTTCCCGTGGAAGTGTCACAAGTGGTCCAGCACAAGCAT
                      ____________________________________________________________
consensus             GAAAATAATAAACCCTTTCTCCTTCCCGTGGAAGTGTCACAAGTGGTCCAGCACAAGCAT
 
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JMFS100E06+           GCCAGAGTTCCTTGTACAAAGGATCATGTGAAGAAGCTGGATAAGCTCCTCTAAACTGAT
JMSF003N10+           GCCAGAGTTCCTTGTACAAAGGATCATGTGAAG                           
JMFS068H05+           GCCAGAGTTCCTTGTACAAAGGATCATGTGAAGAAGCTGGATAAGCTCCTCTAAACTGAT
JMSF048K08+           GCCAGAGTTCCTTGTACAAAGGATCATGTGAAGAAGCTGGATAAGCTCCTCTAAACTGAT
                      ____________________________________________________________
consensus             GCCAGAGTTCCTTGTACAAAGGATCATGTGAAGAAGCTGGATAAGCTCCTCTAAACTGAT
 
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JMFS100E06+           TTGCCACAACGTGAGCCATTATATAACTTGAAGCCCCAAATTTGTGTGATAGTATCTCTC
JMFS068H05+           TTGCCACAACGTGAGCCATTATATAACTTGAAGCCCCAAATTTGTGTGATAGTATCTCTC
JMSF048K08+           TTGCCACAACGTGAGCCATTATATAACTTGAAGCCCCAAATTTGTGTGATAGTATCTCTC
                      ____________________________________________________________
consensus             TTGCCACAACGTGAGCCATTATATAACTTGAAGCCCCAAATTTGTGTGATAGTATCTCTC
 
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JMFS100E06+           AACCAAATGATGCAATCTTGCTTGTACAAGATGTCAGCGCTATGCAAAA           
JMFS068H05+           AACCAAATGATGCAATCTTGCTTGTACAAGATGTCAGCGCTATGCAAAACAATACAGATA
JMSF048K08+           AACCAAATGATGCAATCTTGCTTGTACAAGATGTCAGCGCTATGCAAAACAATACAGATA
                      ____________________________________________________________
consensus             AACCAAATGATGCAATCTTGCTTGTACAAGATGTCAGCGCTATGCAAAACAATACAGATA
 
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JMFS068H05+           TAGATTTCAGGTATCCACAACAATGCCAACAGTCCCCGCCAAAAAGCTCGAAAAATCCGC
JMSF048K08+           TAGATTTCAGGTATCCACAACAATGCCAACAGTCCCCGCCAAAAAGCTCGAAAAATCCGC
                      ____________________________________________________________
consensus             TAGATTTCAGGTATCCACAACAATGCCAACAGTCCCCGCCAAAAAGCTCGAAAAATCCGC
 
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JMFS068H05+           CATTTCCACAAATAGCTATGTGCTATCACGTTAGAGGCAGCAGCTCCAATTGATCGATCA
JMSF048K08+           CATTTCCACAAATAGCTATGTGCTATCACGTTAGAGGCAGCAGCTCCAATTGATCGATCA
                      ____________________________________________________________
consensus             CATTTCCACAAATAGCTATGTGCTATCACGTTAGAGGCAGCAGCTCCAATTGATCGATCA
 
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JMFS068H05+           GTAGACACCAATAATTAGGGTTTTGACGAAGAGTAAAGCTGCAAACTTTAGAGAGAGAAA
JMSF048K08+           GTAGACACCAATAATTAGGGTTTTGACGAAGAGTAAAGCTGCAAACTTTAGAGAGAGAAA
                      ____________________________________________________________
consensus             GTAGACACCAATAATTAGGGTTTTGACGAAGAGTAAAGCTGCAAACTTTAGAGAGAGAAA
 
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JMFS068H05+           AGGAGAAAGAGAGAGACAGGTAATGGTCTTTGCCTGGTTGAA                  
JMSF048K08+           AGGAGAAAGAGAGAGACAGGTAATGGTCTTTGCCTGGTTGAAGCCGACAGTATTTTCATC
                      ____________________________________________________________
consensus             AGGAGAAAGAGAGAGACAGGTAATGGTCTTTGCCTGGTTGAAGCCGACAGTATTTTCATC