Contig 003885:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF048G05+                    AAAATTCATTCCCATTTTCCATCAGTAAAAGTGACAGTTAACTAAGCTCCC
                      ____________________________________________________________
consensus                      AAAATTCATTCCCATTTTCCATCAGTAAAAGTGACAGTTAACTAAGCTCCC
 
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JMSF048G05+           TAAAATAGACACACACTATCATCACTGTGAGGGCTAATGATAGCAGCCATGGGGGAAATT
                      ____________________________________________________________
consensus             TAAAATAGACACACACTATCATCACTGTGAGGGCTAATGATAGCAGCCATGGGGGAAATT
 
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JMSF048G05+           AAACCTCTATACTAATCAAGCATTGCCAATCCAATCTCTGATTATAATTGGACCAATTGA
                      ____________________________________________________________
consensus             AAACCTCTATACTAATCAAGCATTGCCAATCCAATCTCTGATTATAATTGGACCAATTGA
 
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JMSF048G05+           CTACAAATGAAGAGAAATCATAAAAACCCAAATTCAGATTCAGCCTATCCACCCAAATCT
                      ____________________________________________________________
consensus             CTACAAATGAAGAGAAATCATAAAAACCCAAATTCAGATTCAGCCTATCCACCCAAATCT
 
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JMSF048G05+           CCTTTCATATCAGAAACAATACCTATGAAACACACAGAAACAATATTAACAAACAAGGTT
                      ____________________________________________________________
consensus             CCTTTCATATCAGAAACAATACCTATGAAACACACAGAAACAATATTAACAAACAAGGTT
 
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JMSF048G05+           CAATGTTTTATGAGTATTGTATGATTAACAACATAAAAACACAGTCTTTATATTTACCCA
                      ____________________________________________________________
consensus             CAATGTTTTATGAGTATTGTATGATTAACAACATAAAAACACAGTCTTTATATTTACCCA
 
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JMSF004D05+                                       AATACCTCAAGAACTGATCCCATAGGAAATTA
JMSF048G05+           CAAATCAAAACATGAGAACTTGCTCAGAAATACCTCAAGAACTGATCCCATAGGAAATTA
                      ____________________________________________________________
consensus             CAAATCAAAACATGAGAACTTGCTCAGAAATACCTCAAGAACTGATCCCATAGGAAATTA
 
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JMSF004D05+           TTGAAGTCATGCACCACCGTTGACAAGTCAACTCCCCATGTCCTTCTAGAACTCTGCAAA
JMSF048G05+           TTGAAGTCATGCACCACCGTTGACAAGTCAACTCCCCATGTCCTTCTAGAACTCTGCAAA
                      ____________________________________________________________
consensus             TTGAAGTCATGCACCACCGTTGACAAGTCAACTCCCCATGTCCTTCTAGAACTCTGCAAA
 
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JMSF004D05+           AAGCCTAAAGAACACCAAGTTTGAACCTCTGCCAAGGTAACAGGGAAGAGATTAAGAGAC
JMSF048G05+           AAGCCTAAAGAACACCAAGTTTGAACCTCTGCCAAGGTAACAGGGAAGAGATTAAGAGAC
                      ____________________________________________________________
consensus             AAGCCTAAAGAACACCAAGTTTGAACCTCTGCCAAGGTAACAGGGAAGAGATTAAGAGAC
 
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JMSF004D05+           AAGAAAACACCAACCCTTGCCTTCAATTCCTTGATTAATTACAACAGTTCCCAGAATTCA
JMSF048G05+           AAGAAAACACCAACCCTTGCCTTCAATTCCTTGATTAATTACAACAGTTCCCAGAATTCA
                      ____________________________________________________________
consensus             AAGAAAACACCAACCCTTGCCTTCAATTCCTTGATTAATTACAACAGTTCCCAGAATTCA
 
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JMSF004D05+           ACAAACCAAGAAACATAAAGAAGTAGGGAGAAAATTTATGTTGTCTGTCTCTTAGGGTTG
JMSF048G05+           ACAAACCAAGAAACATAAAGAAGTAGGGAGAAAATTTATGTTGTCTGTCTCTTAGGGTTG
                      ____________________________________________________________
consensus             ACAAACCAAGAAACATAAAGAAGTAGGGAGAAAATTTATGTTGTCTGTCTCTTAGGGTTG
 
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JMSF004D05+           ACAGCAACTTGGAGCTGTGGGCATGTTTGATAGAGGGTGTGT                  
JMSF048G05+           ACAGCAACTTGGAGCTGTGGGCATGTTTGATAGAGGGTGTGTGGGCAGTAATTAGCTAGC
                      ____________________________________________________________
consensus             ACAGCAACTTGGAGCTGTGGGCATGTTTGATAGAGGGTGTGTGGGCAGTAATTAGCTAGC