| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF017L21 | Sequence | 414 | 003883 (7) | ref|XP_004247299.2| | 3e-61 | PREDICTED: RNA-binding protein FUS-like, partial [Solanum lycopersicum] | 470 | 004712 (11) | ref|XP_010255491.1| | 2e-39 | PREDICTED: E3 ubiquitin-protein ligase At1g12760-like isoform X4 [Nelumbo nucif |
| JMFN019I11 | Sequence | 614 | 003883 (7) | ||||||||
| JMSF018O24 | Sequence | 252 | 003883 (7) | ref|XP_010547056.1| | 6e-17 | PREDICTED: TATA-binding protein-associated factor 2N-like [Tarenaya hassleriana | 779 | 003883 (7) | ref|XP_006912148.1| | 2e-05 | PREDICTED: mucin-2-like [Pteropus alecto] |
| JMSF044B03 | Sequence | 617 | 003883 (7) | emb|CDP03852.1| | 6e-77 | unnamed protein product [Coffea canephora] | 603 | 004575 (17) | ref|XP_011075483.1| | 2e-85 | PREDICTED: 40S ribosomal protein S9-2 [Sesamum indicum] ref|XP_011075484.1| PRED |
| JMSF047L04 | Sequence | 650 | 003883 (7) | emb|CDP03852.1| | 7e-79 | unnamed protein product [Coffea canephora] | 783 | 003883 (7) | ref|XP_006912148.1| | 3e-05 | PREDICTED: mucin-2-like [Pteropus alecto] |
This contig is upended
. : . : . : . : . : . :
JMFN019I11- GAGAGAGAACTAGTCTGAGXXXXXXXXXXXXXXXXXXGGAAGAACA
____________________________________________________________
consensus GAGAGAGAACTAGTCTGAGNNNNNNNNNNNNNNNNNNGGAAGAACA
. : . : . : . : . : . :
JMFN019I11- AATATAATATAGATATTTGCAACTGAGTGTGAAACAAATGTGACAGCAGTCAGAATTGGC
rJMSF047L04- AATGTGACAGCAGTCAGAATTGGC
rJMSF018O24- AATGTGACAGCAGTCAGAATTGGC
____________________________________________________________
consensus AATATAATATAGATATTTGCAACTGAGTGTGAAACAAATGTGACAGCAGTCAGAATTGGC
. : . : . : . : . : . :
JMFN019I11- TTCTTTGCTTGGCTTCATAAAAACTAAAAAGCAATTTACTCTCAAATAAACTTTTCCCAC
rJMSF047L04- TTCTTTGCTTGGCTTCATAAAAACTAAAAAGCAATTTACTCTCAAATAAACTTTTCCCAC
rJMSF018O24- TTCTTTGCTTGGCTTCATAAAAACTAAAAAGCAATTTACTCTCAAATAAACTTTTCCCAC
____________________________________________________________
consensus TTCTTTGCTTGGCTTCATAAAAACTAAAAAGCAATTTACTCTCAAATAAACTTTTCCCAC
. : . : . : . : . : . :
JMFN019I11- ATATCATATGATGCTGAAAACCAACAAAACCACTCTTAAACCCCGTAATTTCATGCTTTT
rJMSF047L04- ATATCATATGATGCTGAAAACCAACAAAACCACTCTTAAACCCCGTAATTTCATGCTTTT
rJMSF018O24- ATATCATATGATGCTGAAAACCAACAAAACCACTCTTAAACCCCGTAATTTCATGCTTTT
____________________________________________________________
consensus ATATCATATGATGCTGAAAACCAACAAAACCACTCTTAAACCCCGTAATTTCATGCTTTT
. : . : . : . : . : . :
JMFN019I11- TAGACACAAGATGACTGACTTTGACATAATAACCCCACTCAAGCCAAGGCGAACAAGCAA
rJMSF047L04- TAGACACAAGATGACTGACTTTGACATAATAACCCCACTCAAGCCAAGGCGAACAAGCAA
rJMSF018O24- TAGACACAAGATGACTGACTTTGACATAATAACCCCACTCAAGCCAAGGCGAACAAGCAA
____________________________________________________________
consensus TAGACACAAGATGACTGACTTTGACATAATAACCCCACTCAAGCCAAGGCGAACAAGCAA
. : . : . : . : . : . :
JMFN019I11- GGTCACCAATCCCACACACTATGCTCGGTTGCTGGCACCCCCTCTTGGACCACCACGGTT
rJMSF047L04- GGTCACCAATCCCACACACTATGCTCGGTTGCTGGCACCCCCTCTTGGACCACCACGGTT
rJMSF018O24- GGTCACCAATCCCACACACTATGCTCGGTTGCTGGCACCCCCTCTTGGACCACCACGGTT
____________________________________________________________
consensus GGTCACCAATCCCACACACTATGCTCGGTTGCTGGCACCCCCTCTTGGACCACCACGGTT
. : . : . : . : . : . :
JMFN019I11- TCCCATCCGTCCACCACGTCCACGACCCCCATAGCCCCTACCACCTCGCCCATATCCAGT
rJMSF047L04- TCCCATCCGTCCACCACGTCCACGACCCCCATAGCCCCTACCACCTCGCCCATATCCAGT
rJMSF018O24- TCCCATCCGTCCACCACGTCCACGACCCCCATAGCCCCTACCACCTCGCCCATATCCAGT
____________________________________________________________
consensus TCCCATCCGTCCACCACGTCCACGACCCCCATAGCCCCTACCACCTCGCCCATATCCAGT
. : . : . : . : . : . :
JMFN019I11- GCCACGATAGCCCCAATTACCACGACCACCACCTCGACCCCAGTTTGAGTACCCACCATT
rJMSF047L04- GCCACGATAGCCCCAATTACCACGACCACCACCTCGACCCCAGTTTGAGTACCCACCATT
rJMSF018O24- GCCACGATAGCCCCAATTACCACGACCACCACCTCGACCCCAGTTTGAGTACCCACCATT
____________________________________________________________
consensus GCCACGATAGCCCCAATTACCACGACCACCACCTCGACCCCAGTTTGAGTACCCACCATT
. : . : . : . : . : . :
JMFN019I11- TTCTTGATAGCTTCCTTGATTATTCCCCTGATAGCTTCCTTGATTATTCCCCTGATAGCT
rJMSF047L04- TTCTTGATAGCTTCCTTGATTATTCCCCTGATAGCTTCCTTGATTATTCCCCTGATAGCT
rJMSF018O24- TTCTTGATAGCTTCCTTGATTATTCCCCTGATAGCTTCCTTGATTATTCCCCTGATAGCT
____________________________________________________________
consensus TTCTTGATAGCTTCCTTGATTATTCCCCTGATAGCTTCCTTGATTATTCCCCTGATAGCT
. : . : . : . : . : . :
JMFN019I11- TCCTTGATTGTTCCCCTGATAGTTTCCTTGATTGTTACCCTGATAGTTNTGATTGTTCCC
rJMSF047L04- TCCTTGATTGTTCCCCTGATAGTTTCCTTGATTGTTACCCTGATAGTTTTGATTGTTCCC
rJMSF018O24- TCCTTGATTGTTCCCCTGATAGTTTCCTTGATTGTTACCCTGATAGTTTTGATTGTTCCC
____________________________________________________________
consensus TCCTTGATTGTTCCCCTGATAGTTTCCTTGATTGTTACCCTGATAGTTTTGATTGTTCCC
. : . : . : . : . : . :
JMFN019I11- CTGATAGTTTCCTTGATTGTTACCCTGA
rJMSF047L04- CTGATAGTTTCCTTGATTGTTACCCTGATAGTTTTGATTGTTACCCTGATAGTTCCCTTG
rJMSF018O24- CTGATAGTTTCCTTGATTGTTACCCTGATAGTTTTGATTGTTACCCTGATAGTTCCCTTG
____________________________________________________________
consensus CTGATAGTTTCCTTGATTGTTACCCTGATAGTTTTGATTGTTACCCTGATAGTTCCCTTG
. : . : . : . : . : . :
rJMSF047L04- ATTGCTCCCTGGATAGTTTCCTTGATTGTTCCCCTGATAGTTCCCTCTATAATTCCCCTG
rJMSF018O24- ATTGCTCCCTGGATAGTTTCCTTGATTGTTCCCCTGATAGTTCCCTCTATAATTCCCCTG
____________________________________________________________
consensus ATTGCTCCCTGGATAGTTTCCTTGATTGTTCCCCTGATAGTTCCCTCTATAATTCCCCTG
. : . : . : . : . : . :
rJMSF047L04- GTAATTTCCTCTATAATTTCCCTGATAGTTCCCATAACCACCTCTGCTCCAACCCCGTCC
rJMSF018O24- GTAATTTCCTCTATAATTTCCCTGATAGTTACCATAACCACCTCTGCTCCAACCCCGTCC
____________________________________________________________
consensus GTAATTTCCTCTATAATTTCCCTGATAGTTCCCATAACCACCTCTGCTCCAACCCCGTCC
. : . : . : . : . : . :
rJMSF047L04- CCTCCCTCTGCCACGGCCTCTTCCTCGACCATAAGAATCTTCGTTACCAGCATTATAAAC
rJMSF018O24- CCTCCCTCTGCCACGGCCTCTTCCTCGACCATAAGAATCTTCGTTACCAGCATTATAAAC
JMSF044B03+ TTCGTTACCAGCATTATAAAC
JMSF047L04+ TGCCACGGCNTCTTCCTCGACCATAAGAATCTTCGTTACCAGCATTATAAAC
____________________________________________________________
consensus CCTCCCTCTGCCACGGCCTCTTCCTCGACCATAAGAATCTTCGTTACCAGCATTATAAAC
. : . : . : . : . : . :
rJMSF047L04- CGCAGGTGCTTGTCTAGGTGGCTGANGCTGCTG
rJMSF018O24- CGCANGTGCTTGTCTAGGTGGCTGATGCTGCTG
JMSF044B03+ CGCAAGTGCTTGTCTAGGTGGCTGATGCTGCTGCGGCTGATAGTTATTATACCATCTTCC
JMSF047L04+ CGCAAGTGCTTGTCTAGGTGGCTGATGCTGCTGCGGCTGATAGTTATTATACCATCTTCC
____________________________________________________________
consensus CGCAAGTGCTTGTCTAGGTGGCTGATGCTGCTGCGGCTGATAGTTATTATACCATCTTCC
. : . : . : . : . : . :
JMFF017L21+ ATGAGACGGAGCTTGATACCCAGGGGAGTTCTTGTTCAGCTCTTTTGTTGA
JMSF044B03+ CTGCTCTGAATGAGATGGAGCTTGATACCCAGGAGAATTCTTGTTCAGCTCCTTTGTAGA
JMSF047L04+ CTGCTCTGAATGAGATGGAGCTTGATACCCAGGAGAATTCTTGTTCAGCTCCTTTGTAGA
____________________________________________________________
consensus CTGCTCTGAATGAGATGGAGCTTGATACCCAGGAGAATTCTTGTTCAGCTCCTTTGTAGA
. : . : . : . : . : . :
JMFF017L21+ TAAGGTGATTGAAATCATGGAAACGTGGCGAGTCTGTTCCNCTATCTGTAGCCCCTCTTC
JMSF044B03+ CAAGGTGATGGAAATCATAGACACATGGCGAGTCTGCTCCACTGTCTCAAGACCTTCTTC
JMSF047L04+ CAAGGTGATGGAAATCATAGACACATGGCGAGTCTGCTCCACTGTCTCAAGACCTTCTTC
____________________________________________________________
consensus CAAGGTGATGGAAATCATAGACACATGGCGAGTCTGCTCCACTGTCTCAAGACCTTCTTC
. : . : . : . : . : . :
JMFF017L21+ AATGGGTTCCCAAACATCTGTTATGCTTACAGAGCTAATGGAAGTATCTTGGTGCAGTCC
JMSF044B03+ AATGGGTTCCCATACATCAGTTATGCTTACTGAGCTGATGGCAGTGTCTTGGTGCAAACC
JMSF047L04+ AATGGGTTCCCATACATCAGTTATGCTTACTGAGCTGATGGCAGTGTCTTGGTGCAAACC
____________________________________________________________
consensus AATGGGTTCCCATACATCAGTTATGCTTACTGAGCTGATGGCAGTGTCTTGGTGCAAACC
. : . : . : . : . : . :
JMFF017L21+ AGGAAATCTT
JMSF044B03+ AGGAAACCTTCTCTTGATAATCTCAGTAATAGCCACAGTCTTGCTGATCGCCTGACCCAT
JMSF047L04+ AGGAAACCTTCTCTTGATAATCTCAGTAATAGCCACAGTCTTGCTGATCGCCTGACCCAT
____________________________________________________________
consensus AGGAAACCTTCTCTTGATAATCTCAGTAATAGCCACAGTCTTGCTGATCGCCTGACCCAT
. : . : . : . : . : . :
JMSF044B03+ AGCTTTCAATACTATCTCTTTCCCACGTCTCTCCTGCAGAAGACTGGTGGCGTAACTGAT
JMSF018O24+ TGCAGAAGACTGGTGGCGTAACTGAT
JMSF047L04+ AGCTTTCAATACTATCTCTTTCCCACGTCTCTCCTGCAGAAGACTGGTGGCGTAACTGAT
____________________________________________________________
consensus AGCTTTCAATACTATCTCTTTCCCACGTCTCTCCTGCAGAAGACTGGTGGCGTAACTGAT
. : . : . : . : . : . :
JMSF044B03+ GTAGTTTCGGAGCAAGCCCTGCGAAGTAATTCGGATCTCGTTCTCATTTATGGGCGATTC
JMSF018O24+ GTAGTTTCGGAGCAAGCCCTGCGAAGTAATTCGGATCTCGTTCTCATTTATGGGCGATTC
JMSF047L04+ GTAGTTTCGGAGCAAGCCCTGCGAAGTAATTCGGATCTCGTTCTCATTTATGGGCGATTC
____________________________________________________________
consensus GTAGTTTCGGAGCAAGCCCTGCGAAGTAATTCGGATCTCGTTCTCATTTATGGGCGATTC
. : . : . : . : . : . :
JMSF044B03+ GGGCTTGGGTTTCTCGACCTTCTGGTATCTATCCATGGGAGCTCTGGAAGGAGCGTTTAA
JMSF018O24+ GGGCTTGGGTTTCTCGACCTTCTGGTATCTATCCATGGGAGCTCTGGAAGGAGCGTTTAA
JMSF047L04+ GGGCTTGGGTTTCTCGACCTTCTGGTATCTATCCATGGGAGCTCTGGAAGGAGCGTTTAA
____________________________________________________________
consensus GGGCTTGGGTTTCTCGACCTTCTGGTATCTATCCATGGGAGCTCTGGAAGGAGCGTTTAA
. : . : . : . : . : . :
JMSF044B03+ ACCCCTATTTTGGGAGAACGCAGAGCTAGAGT--GAGGTACGCAAAGAAGAAGGCTAAAC
JMSF018O24+ ACCCCTATTTTGGGAGAACGCAGAGCTAGAGTGCGAGGTACGCAAAGAAGAAGGCTAAAC
JMSF047L04+ ACCCCTATTTTGGGAGAACG--GAGCTAGAGTGCGAGGTACGCAAAGAAGAAGGCTAAAC
____________________________________________________________
consensus ACCCCTATTTTGGGAGAACGCAGAGCTAGAGTGCGAGGTACGCAAAGAAGAAGGCTAAAC
. : . : . : . : . : . :
JMSF044B03+ CCTTGGCGAGGAAGCAGACGAAGAAGAAGAAGCAGTGGCGGCAGTGAATTGTTAACC
JMSF018O24+ CCTTGGCGAGGAAGCAGACGAAGAAGAAGAAGCAGTGGCGGCAGT
JMSF047L04+ CCTTGGCGAGGAAGCAGACGAAGAAGAAGAAGCAGTGGCGGCAGTGAATTGTTAACCACC
____________________________________________________________
consensus CCTTGGCGAGGAAGCAGACGAAGAAGAAGAAGCAGTGGCGGCAGTGAATTGTTAACCACC