clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFN044K23 | Sequence | 613 | 003882 (11) | ref|XP_006364741.1| | 8e-86 | PREDICTED: uncharacterized protein LOC102595744 isoform X3 [Solanum tuberosum] | |||||
JMSF019M23 | Sequence | 249 | 003882 (11) | ref|XP_006364740.1| | 2e-17 | PREDICTED: uncharacterized protein LOC102595744 isoform X2 [Solanum tuberosum] | 649 | 003882 (11) | ref|XP_011094166.1| | 185 | PREDICTED: uncharacterized protein LOC105173940 [Sesamum indicum] |
JMSF032B08 | Sequence | 702 | 003882 (11) | ref|XP_006364740.1| | 9e-114 | PREDICTED: uncharacterized protein LOC102595744 isoform X2 [Solanum tuberosum] | 709 | 003882 (11) | ref|XP_004249088.1| | 263 | PREDICTED: uncharacterized protein LOC101253037 [Solanum lycopersicum] |
JMSF040E12 | Sequence | 649 | 003882 (11) | ref|XP_006364740.1| | 3e-88 | PREDICTED: uncharacterized protein LOC102595744 isoform X2 [Solanum tuberosum] | 862 | 003882 (11) | ref|XP_006364740.1| | 1e-99 | PREDICTED: uncharacterized protein LOC102595744 isoform X2 [Solanum tuberosum] |
JMSF041C18 | Sequence | 798 | 003882 (11) | ref|XP_006364740.1| | 9e-131 | PREDICTED: uncharacterized protein LOC102595744 isoform X2 [Solanum tuberosum] | 553 | 003882 (11) | ref|XP_006364741.1| | 7e-46 | PREDICTED: uncharacterized protein LOC102595744 isoform X3 [Solanum tuberosum] |
JMSF047K17 | Sequence | 673 | 003882 (11) | ref|XP_006364740.1| | 4e-93 | PREDICTED: uncharacterized protein LOC102595744 isoform X2 [Solanum tuberosum] | 734 | 003882 (11) | ref|XP_004249088.1| | 265 | PREDICTED: uncharacterized protein LOC101253037 [Solanum lycopersicum] |
This contig is upended
. : . : . : . : . : . :
rJMSF047K17- AT
rJMSF040E12- TGACAGAAT
____________________________________________________________
consensus TGACAGAAT
. : . : . : . : . : . :
rJMSF032B08- GTAAAGCAGTTTCGATAGATCAATAATCTCAAACA
rJMSF047K17- TACACTTGGTAGAATTACACGATCTGTAAAGCAGTTTCGATAGATCAATAATCTCAAACA
rJMSF041C18- GTAAAGCAGTTTCGATAGATCAATAATCTCAAACA
rJMSF019M23- GTAAAGCAGTTTCGATAGATCAATAATCTCAAACA
rJMSF040E12- TACACTTGNTAGAATTACACGATCTGTAAAGCAGTTTCGATAGATCAATAATCTCAAACA
____________________________________________________________
consensus TACACTTGGTAGAATTACACGATCTGTAAAGCAGTTTCGATAGATCAATAATCTCAAACA
. : . : . : . : . : . :
JMFN044K23+ GCAAAATCAATTGAAT
rJMSF032B08- CCAACTTAGGTGA--AAAAAAAAATGAAAAGAATCATACACACNGCAAAATCAATTGAAT
rJMSF047K17- CCAACTTAGGTGA--AAAAAAAAATGAAAAGAATCATACACACNGCAAAATCAATTGAAT
rJMSF041C18- CCAACTTAGGTGA-AAAAAAAAAATGAAAAGAATCATACACACNGCAAAATCAATTGAAT
rJMSF019M23- CCAACTTAGGTGAAAAAAAAAAAANGAAAAGAATCATACNCNCNGCAAAATCAATTGAAT
rJMSF040E12- CCAACTTAGGTGA--AAAAAAAAATGAAAAGAATCATACACACTGCAAAATCAATTGAAT
____________________________________________________________
consensus CCAACTTAGGTGA--AAAAAAAAATGAAAAGAATCATACACACTGCAAAATCAATTGAAT
. : . : . : . : . : . :
JMFN044K23+ ATGGCTAATGGTTCGTGACATCTGCAATGGCAAAACAAGTATCCAATAACTCTTGACCAC
rJMSF032B08- ATGGCTAANGGTTCGNGACATCTGCAANGGCAAAACAAGTATCCAATAACTCTTGACCAC
rJMSF047K17- ATGGCTAANGGTTCGNGACATCTGCAANGGCAAAACAAGTATCCAATAACTCTTGACCAC
rJMSF041C18- ATGGCTAANGGTTCGNGACATCTGCAANGGCAAAACAAGTATCCAATAACTCTTGACCAC
rJMSF019M23- ANGGCTAAGGGTTCGGGACATCNGCAAGGGCAAAACAAGTATCCAATAACTCTNGACCNC
rJMSF040E12- ATGGCTAAGGGTTCGNGACATCTGCAANGGCAAAACAAGTATCCAATAACTCTTGACCAC
____________________________________________________________
consensus ATGGCTAAGGGTTCGTGACATCTGCAATGGCAAAACAAGTATCCAATAACTCTTGACCAC
. : . : . : . : . : . :
JMFN044K23+ GGAGGAATCCACACTGTTGCCAACTTAGCAATGTTGATGTAATTCAAGTCTATACAACCA
rJMSF032B08- GGAGGAATCCACACTGTTGCCAACTTAGCAANGTTGATGTAATTCAAGTCTATACAACCA
rJMSF047K17- GGAGGAATCCACACTGTTGCCAACTTAGCAANGTTGATGTAATTCAAGTCTATACAACCA
rJMSF041C18- GGAGGAATCCACACNGTTGCCAACTTAGCAANGTTGATGTAATTCAAGTCTATACAACCA
rJMSF019M23- GGAGGAANCCNCNCNGTTGCCAACTTAGCAANGTTGANGTAATTCANGTCTATACAACCA
rJMSF040E12- GGAGGAATCCACACNGTTGCCAACTTAGCAANGTTGATGTAATTCAAGTCTATACAACCA
____________________________________________________________
consensus GGAGGAATCCACACTGTTGCCAACTTAGCAATGTTGATGTAATTCAAGTCTATACAACCA
. : . : . : . : . : . :
JMFN044K23+ GAGGAGAATCCTTTGCTGTCATATTTGAGAATGCAAAGTTCCATTTTTCTCTTGTTTTTG
rJMSF032B08- GAGGAGAATCCTTTGCTGTCATATTTGAGAATGCAAAGTTCCATTTTTCTCTTGTTTTTG
rJMSF047K17- GAGGAGAATCCTTTGCTGTCATTTTTGAGAATGCAAAGTTCCATTTTTCTCTTGTTTTTG
rJMSF041C18- GAGGAGAATCCTTTGCTGTCATATTTGANAANGCAAAGTTCCATTTTTCNCTNGTTTTTG
rJMSF019M23- GAGGANAANCCTTTGCNGTCATATTTGANAANGCAAAGTTCCATTTTTCNCTNGTTTTTG
rJMSF040E12- GAGGAGAATCCTTTGCTGTCATTTTTGAGAATGCAAAGTTCCATTTTTCTCTTGTTTTTG
____________________________________________________________
consensus GAGGAGAATCCTTTGCTGTCATATTTGAGAATGCAAAGTTCCATTTTTCTCTTGTTTTTG
. : . : . : . : . : . :
JMFN044K23+ TACTAGCAGCCTGCCCAGCCTTTGCCACCCTAGTAAAAGCACCATTCAGCCAAGCAGCTC
rJMSF032B08- TACTAGCAGCCTGCCCAGCCTTTGCCACCCTAGTAAAAGCACCATTCAGCCAAGCAGCTC
rJMSF047K17- TACTAGCAGCCTGCCCAGCCTTTGCCACCCTAGTAAAAGCACCATTCAGCCAAGCAGCTC
rJMSF041C18- TACTAGCAGCCNGCCCAGCCTTTGCCACCCTAGTAAAAGCACCATTCAGCCAAGCAGCTC
rJMSF019M23- TACNAGCAGCCNGCCCAGCCTTTGCCNCCCTAGTAAAAGCNCCATTCAGCCAAGCAGCTC
rJMSF040E12- TACTAGCAGCCTGCCCAGCCTTTGCCACCCTAGTAAAAGCACCATTCAGCCAAGCAGCTC
JMSF041C18+ TGCCCAGCCTTTGCCACCCTAGTAAAAGCACCATTCAGCCAAGCAGCTC
____________________________________________________________
consensus TACTAGCAGCCTGCCCAGCCTTTGCCACCCTAGTAAAAGCACCATTCAGCCAAGCAGCTC
. : . : . : . : . : . :
JMFN044K23+ CAGCAGTTACATACCTGCTTGATTTGACTGCTGATCCAGTGTCATTTATTTTACGTTCAG
rJMSF032B08- CAGCAGTTACATACCTGCTTGATTTGACTGCTGATCCAGNGTCATTTATTTTACGTTCAG
rJMSF047K17- CAGCAGTTACATACCTGCTTGATTTGACTGCTGATCCAGTGTCATTTATTTTACGTTCAG
rJMSF041C18- CNGCAGTTACATACCTGCTTGATTTGACNGCTGATCCAGNGTCATTTATTTTACGTTCAG
rJMSF019M23- CNGCAGTTACATACCNGCTTGATTTGACNGCTGATCCAGNGTCATTTATTTTACGTTCAG
rJMSF040E12- CAGCAGTTACATACCTGCTTGATTTGACTGCTGATCCAGNGTCATTTATTTTACGTTCAG
JMSF032B08+ TTGACTGCTGATCCAGTGTCATTTATTTTACGTTCAG
JMSF041C18+ CAGCAGTTACATACCTGCTTGATTTGACTGCTGATCCAGTGTCATTTATTTTACGTTCAG
____________________________________________________________
consensus CAGCAGTTACATACCTGCTTGATTTGACTGCTGATCCAGTGTCATTTATTTTACGTTCAG
. : . : . : . : . : . :
JMFN044K23+ CAGCCATAAGTGCAGCCATTGTTTTATCAGAAACTTGAAGCCTTTGATCCACAGATTTAA
rJMSF032B08- CAGCCATAAGTGCAGCCATTGTTTTATCAGAAACTTGAAGCCTTTGATCCACAGATTTAA
rJMSF047K17- CAGCCATAAGTGCAGCCATTGTTTTATCANAAACTTGAAGCCTTTGATCCACAGATTTAA
rJMSF041C18- CAGCCATAAGTGCAGCCATTGTTTTATCANAAACTTGAAGCCTTTGATCCACAGATTTAA
rJMSF019M23- CANCCATAAGNGCAGCCNTNGTTTTATCAAAAACTTGAAGCCTTTGANCCNCANATTTAA
rJMSF040E12- CAGCCATAAGTGCAGCCATTGTTTTATCAGAAACTTGAAGCCTTTGATCCACAGATTTAA
JMSF032B08+ CAGCCATAAGTGCAGCCATTGTTTTATCAGAAACTTGAAGCCTTTGATCCACAGATTTAA
JMSF041C18+ CAGCCATAAGTGCAGCCATTGTTTTATCAGAAACTTGAAGCCTTTGATCCACAGATTTAA
JMSF047K17+ TCCACAGATTTAA
____________________________________________________________
consensus CAGCCATAAGTGCAGCCATTGTTTTATCAGAAACTTGAAGCCTTTGATCCACAGATTTAA
. : . : . : . : . : . :
JMFN044K23+ CTTTCTGGTTTACCGCAGAAATTCCTACTGTCAGTTTCTCAGAGAGTCCAACTTTTTGGT
rJMSF032B08- CTTTCTGGTTTACCGCAGAAATTCCTACTGTCAGTTTCTCANAGAGTCCAACTTTTTGGT
rJMSF047K17- CTTTCTGGTTTACCGCANAAATTCCTACTGTCAGTTTCTCAGAGAGTCCAACTTTTTGGT
rJMSF041C18- CTTTCTGGTTTACCGCAGAAATTCCTACTGTCAGTTTCTCAGAGAGTCCAACTTTTTGGT
rJMSF019M23- CTTTCNGGTTTACCGCAAAAATTCCTACNGTCAGTTTCNCAAANAGNCCAACTTTTTGGT
rJMSF040E12- CTTTCTGGTTTACCGCANAAATTCCTACTGTCAGTTTCTCANAGAGTCCAACTTTTTGGT
JMSF032B08+ CTTTCTGGTTTACCGCAGAAATTCCTACTGTCAGTTTCTCAGAGAGTCCAACTTTTTGGT
JMSF041C18+ CTTTCTGGTTTACCGCAGAAATTCCTACTGTCAGTTTCTCAGAGAGTCCAACTTTTTGGT
JMSF040E12+ ACCGCAGAAATTCCTACTGTCAGTTTCTCAGAGAGTCCAACTTTTTGGT
JMSF047K17+ CTTTCTGGTTTACCGCAGAAATTCCTACTGTCAGTTTCTCAGAGAGTCCAACTTTTTGGT
____________________________________________________________
consensus CTTTCTGGTTTACCGCAGAAATTCCTACTGTCAGTTTCTCAGAGAGTCCAACTTTTTGGT
. : . : . : . : . : . :
JMFN044K23+ CAAAGGAACTGACTTTAGCAGATGCAGTGGCTGTCAACTGATGCTTCTCATCAAATGCCC
rJMSF032B08- CAAAGGAACTGACTTTAGCAGATGCAGTGGCTGTCAACTGATGCTTCTCATCAAATGCCC
rJMSF047K17- CAAAGGAACTGACTTTAGCAGATGCAGTGGCTGTCAACTGATGCTTCTCATCAAATGCCC
rJMSF041C18- CAAAGGAACTGACTTTAGC
rJMSF019M23- CAAAGGAACTGACTTTAGCAAATGCAGNGGCTGTCAACTGATGCTTCTCATCAAATGCCC
rJMSF040E12- CAAAGGAACTGACTTTAGCANATGCAGNGGCTGTCAACTGATGCTTCTCATCAAATGCCC
JMSF032B08+ CAAAGGAACTGACTTTAGCAGATGCAGTGGCTGTCAACTGATGCTTCTCATCAAATGCCC
JMSF041C18+ CAAAGGAACTGACTTTAGCAGATGCAGTGGCTGTCAACTGATGCTTCTCATCAAATGCCC
JMSF040E12+ CAAAGGAACTGACTTTAGCAGATGCAGTGGCTGTCAACTGATGCTTCTCATCAAATGCCC
JMSF047K17+ CAAAGGAACTGACTTTAGCAGATGCAGTGGCTGTCAACTGATGCTTCTCATCAAATGCCC
____________________________________________________________
consensus CAAAGGAACTGACTTTAGCAGATGCAGTGGCTGTCAACTGATGCTTCTCATCAAATGCCC
. : . : . : . : . : . :
JMFN044K23+ TGGCTTTATTCATAGCATCTTGCCCAATAGCTGAACCTTTTGCTAGCACACTTGAGACAA
rJMSF032B08- TGGCTTTATTCATAGCATCTTGCCCAATAGCTGAACCTTTTGCTAGCACACTTGAGACAA
rJMSF047K17- TGGCTTTATTCATAGCATCTTGCCCAATAGCTGAACCTTTTGCTAGCACACTTGAGACAA
rJMSF019M23- NGGCTTTATTCATAGCATCTTGCCCAATAGCTGAACCTTTTGCTAGCACACTTGA
rJMSF040E12- NGGCTTTATTCATAGCATCTTGCCCAATAGCTGAACCTTTTGCTAGCACACTTGAGACAA
JMSF032B08+ TGGCTTTATTCATAGCATCTTGCCCAATAGCTGAACCTTTTGCTAGCACACTTGAGACAA
JMSF041C18+ TGGCTTTATTCATAGCATCTTGCCCAATAGCTGAACCTTTTGCTAGCACACTTGAGACAA
JMSF040E12+ TGGCTTTATTCATAGCATCTTGCCCAATAGCTGAACCTTTTGCTAGCACACTTGAGACAA
JMSF047K17+ TGGCTTTATTCATAGCATCTTGCCCAATAGCTGAACCTTTTGCTAGCACACTTGAGACAA
____________________________________________________________
consensus TGGCTTTATTCATAGCATCTTGCCCAATAGCTGAACCTTTTGCTAGCACACTTGAGACAA
. : . : . : . : . : . :
JMFN044K23+ CATCTTGTGCTTTACTCACATATACTTTCCTTCCACTGCCTGGAGAAGTTTGTTTG
rJMSF032B08- CATCTTGTGCTTTACTCACATATACTTTCCTTCCACTGCCTGGAGAAGTTTGTTTGTC
rJMSF047K17- CATCTTGTGCTTTACTCACATATACTTTCCTTCCACTGCCTGGAGAAGTTTGTTTGTCCT
rJMSF040E12- CATCTTGNGCTTTACTCACATATACTTTCCTTCCACTGCCTGGAGAAGTTTGTTTGTCCT
JMSF032B08+ CATCTTGTGCTTTACTCACATATACTTTCCTTCCACTGCCTGGAGAAGTTTGTTTGTCCT
JMSF041C18+ CATCTTGTGCTTTACTCACATATACTTTCCTTCCACTGCCTGGAGAAGTTTGTTTGTCCT
JMSF040E12+ CATCTTGTGCTTTACTCACATATACTTTCCTTCCACTGCCTGGAGAAGTTTGTTTGTCCT
JMSF047K17+ CATCTTGTGCTTTACTCACATATACTTTCCTTCCACTGCCTGGAGAAGTTTGTTTGTCCT
____________________________________________________________
consensus CATCTTGTGCTTTACTCACATATACTTTCCTTCCACTGCCTGGAGAAGTTTGTTTGTCCT
. : . : . : . : . : . :
rJMSF047K17- CATCAAATGGTGA
rJMSF040E12- CATCAAATGGTGAGTTAGTTTCCCCGGCGATGCTTGAAGCATTGTCAACAAATATCCTTA
JMSF032B08+ CATCAAATGGTGAGTTAGTTTCCCCGGCGATGCTTGAAGCATTGTCAACAAATATCCTTA
JMSF041C18+ CATCAAATGGTGAGTTAGTTTCCCCGGCGATGCTTGAAGCATTGTCAACAAATATCCTTA
JMSF040E12+ CATCAAATGGTGAGTTAGTTTCCCCGGCGATGCTTGAAGCATTGTCAACAAATATCCTTA
JMSF047K17+ CATCAAATGGTGAGTTAGTTTCCCCGGCGATGCTTGAAGCATTGTCAACAAATATCCTTA
____________________________________________________________
consensus CATCAAATGGTGAGTTAGTTTCCCCGGCGATGCTTGAAGCATTGTCAACAAATATCCTTA
. : . : . : . : . : . :
rJMSF040E12- CTTCCTGAATTTCAGGCTGTGGTACATAATTTTCAGCCAGACTTATGTTCACTATCTGGT
JMSF032B08+ CTTCCTGAATTTCAGGCTGTGGTACATAATTTTCAGCCAGACTTATGTTCACTATCTGGT
JMSF041C18+ CTTCCTGAATTTCAGGCTGTGGTACATAATTTTCAGCCAGACTTATGTTCACTATCTGGT
JMSF040E12+ CTTCCTGAATTTCAGGCTGTGGTACATAATTTTCAGCCAGACTTATGTTCACTATCTGGT
JMSF047K17+ CTTCCTGAATTTCAGGCTGTGGTACATAATTTTCAGCCAGACTTATGTTCACTATCTGGT
____________________________________________________________
consensus CTTCCTGAATTTCAGGCTGTGGTACATAATTTTCAGCCAGACTTATGTTCACTATCTGGT
. : . : . : . : . : . :
rJMSF040E12- CCACTATTGTTGCTC
JMSF032B08+ CCACTATTGTTGCTCCCGACAGCAAAAGAGCAATTTCAAGAGCTTTCGTATCCTTAAAGG
JMSF041C18+ CCACTATTGTTGCTCCCGACAACAAAAGAGCAATTTCAAGAGCTTTCGTATCCTTAAAGG
JMSF040E12+ CCACTATTGTTGCTCCCGACAACAAAAGAGCAATTTCAAGAGCTTTCGTATCCTTAAAGG
JMSF019M23+ CCTTAAAGG
JMSF047K17+ CCACTATTGTTGCTCCCGACAACAAAAGAGCAATTTCAAGAGCTTTCGTATCCTTAAAGG
____________________________________________________________
consensus CCACTATTGTTGCTCCCGACAACAAAAGAGCAATTTCAAGAGCTTTCGTATCCTTAAAGG
. : . : . : . : . : . :
JMSF032B08+ TAACATATGCCGTCCTGTATAGGTCTTGCTCCCGTCGAATCTCAATGTGTTCAATTTCAC
JMSF041C18+ TAACATATGCCGTCCTGTATAGGTCTTGCTCCCGTCGAATCTCAATGTGTTCAATTTCAC
JMSF040E12+ TAACATATGCCGTCCTGTATAGGTCTTGCTCCCGTCGAATCTCAATGTGTTCAATTTCAC
JMSF019M23+ TAACATATGCCGTCCNGTATAGGTCTTGCTCCCGTCGAATCTCAATGTGTTCAATTTCAC
JMSF047K17+ TAACATATGCCGTCCTGTATAGGTCTTGCTCCCGTCGAATCTCAATGTGTTCAATTTCAC
____________________________________________________________
consensus TAACATATGCCGTCCTGTATAGGTCTTGCTCCCGTCGAATCTCAATGTGTTCAATTTCAC
. : . : . : . : . : . :
JMSF032B08+ CGGAAAAGGAGAAGAACTCTCGAACTTCCCTGTCGGTAGCTAGATCTGATAAATTCCCTA
JMSF041C18+ CGGAAAAGGAGAAGAACTCTCGAACTTCCCTGTCGGTAGCTAGATCTGATAAATTCCCTA
JMSF040E12+ CGGAAAAGGAGAAGAACTCTCGAACTTCCCTGTCGGTAGCTAGATCTGATAAATTCCCTA
JMSF019M23+ CGGAAAAGGAGAAGAACTCTCGAACTTCCCTGTCGGTAGCTAGATCTGATAAATTCCCTA
JMSF047K17+ CGGAAAAGGAGAAGAACTCTCGAACTTCCCTGTCGGTAGCTAGATCTGATAAATTCCCTA
____________________________________________________________
consensus CGGAAAAGGAGAAGAACTCTCGAACTTCCCTGTCGGTAGCTAGATCTGATAAATTCCCTA
. : . : . : . : . : . :
JMSF032B08+ CGCGTACTGTTCTTCTGTTCTCCTGCATTGTCAATGGAACTTTCTCTCTCTCTTTCTATC
JMSF041C18+ CGCGTACTGTTCTTCTGTTCTCCTGCATTGTCAATGGAACTTTCTCTCTCTCTTTCTATC
JMSF040E12+ CGCGTACTGTTCTTCTGTTCTCCTGCATTGTCAATGGAACTTTCTCTCTCTCTTTCTATC
JMSF019M23+ CGCGTACTGTTCTTCTGTTCTCCTGCATTGTCAATGGAACTTTCTCTCTCTCTTTCTATC
JMSF047K17+ CGCGTACTGTTCTTCTGTTCTCCTGCATTGTCAATGGAACTTTCTCTCTCTCTTTCTATC
____________________________________________________________
consensus CGCGTACTGTTCTTCTGTTCTCCTGCATTGTCAATGGAACTTTCTCTCTCTCTTTCTATC
. : . : . : . : . : . :
JMSF032B08+ TCTCA
JMSF041C18+ TCTCACAGGTGTTATCAGCGAAGAAAGT
JMSF040E12+ TCTCACAGGTGTTATCAGCGAAGAAAGTGAAATATTGAGAGCAGGAGAATGTGTTTGACC
JMSF019M23+ TCTCACAGGTGTTATCAGCGAAGAAAGTGAAATATTGAGAGCAGGAGAATGTGTTTGACC
JMSF047K17+ TCTCACAGGTGTTATCAGCGAAGAAAGTGAAATATTGAGAGCAGGAGAATGTGTTTGACC
____________________________________________________________
consensus TCTCACAGGTGTTATCAGCGAAGAAAGTGAAATATTGAGAGCAGGAGAATGTGTTTGACC