Contig 003881:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF020J04Sequence570003881 (4)ref|XP_006343787.1|73.9PREDICTED: uncharacterized protein LOC102590733 [Solanum tuberosum]155012779 (5)
JMSF023F24Sequence646003881 (4)ref|XP_009587677.1|126PREDICTED: uncharacterized protein LOC104085370 [Nicotiana tomentosiformis]734012779 (5)ref|XP_009587677.1|389PREDICTED: uncharacterized protein LOC104085370 [Nicotiana tomentosiformis]
JMSF047J18Sequence707003881 (4)ref|XP_009587677.1|151PREDICTED: uncharacterized protein LOC104085370 [Nicotiana tomentosiformis]738012779 (5)ref|XP_009587677.1|355PREDICTED: uncharacterized protein LOC104085370 [Nicotiana tomentosiformis]
JMSF050N23Sequence538003881 (4)gb|EYU33479.1|6e-06hypothetical protein MIMGU_mgv1a0044082mg, partial [Erythranthe guttata]684012779 (5)ref|XP_009587677.1|319PREDICTED: uncharacterized protein LOC104085370 [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF023F24+ TTCTGGATTTCGCT
JMSF047J18+ AACTAGTGCCCAGTTGTAGAGTGCATCGTAATCTTCTGGATTTCGCT
                      ____________________________________________________________
consensus AACTAGTGCCCAGTTGTAGAGTGCATCGTAATCTTCTGGATTTCGCT
 
. : . : . : . : . : . :
JMSF023F24+ CTAGTGCACTAGCATACCTCCGGGCAGCATATGTAAGGATTCGTTGGCGAGACCGGCCCT
JMSF047J18+ CTAGTGCACTAGCATACCTCCGGGCAGCATATGTAAGGATTCGTTGGCGAGACCGGCCCT
                      ____________________________________________________________
consensus CTAGTGCACTAGCATACCTCCGGGCAGCATATGTAAGGATTCGTTGGCGAGACCGGCCCT
 
. : . : . : . : . : . :
JMSF023F24+ CCTCATCAGCACCTGTGACATTGTTGATCAGCTCCAAGGCAGCATCAGTGTGATCTGTGC
JMSF050N23+ CAAGGCAGCATCAGTGTGATCTGTGC
JMFF020J04+ TCATCAGCACCTGTGACATTGTTGATCAGCTCCAAGGCAGCATCAGTGTGATCTGTGC
JMSF047J18+ CCTCATCAGCACCTGTGACATTGTTGATCAGCTCCAAGGCAGCATCAGTGTGATCTGTGC
                      ____________________________________________________________
consensus CCTCATCAGCACCTGTGACATTGTTGATCAGCTCCAAGGCAGCATCAGTGTGATCTGTGC
 
. : . : . : . : . : . :
JMSF023F24+ GATTGCTTTCCTGACTGCGAGGGGTGCCAGCGTCGCGCGCTTCGGAATCTTCACCACCAT
JMSF050N23+ GATTGCTTTCCTGACTNCGAGGGGTGCCAGCGTCGCGCGCTTCGGAATCTTCACCACCAT
JMFF020J04+ GATTGCTTTCCTGACTGCGAGGGGTGCCAGCGTCGCGCGCTTCGGAATCTTCACCACCAT
JMSF047J18+ GATTGCTTTCCTGACTGCGAGGGGTGCCAGCGTCGCGCGCTTCGGAATCTTCACCACCAT
                      ____________________________________________________________
consensus GATTGCTTTCCTGACTGCGAGGGGTGCCAGCGTCGCGCGCTTCGGAATCTTCACCACCAT
 
. : . : . : . : . : . :
JMSF023F24+ TCTTCAATTCATTCAACAATTCTCTCATCGTGAAAGTTCGGTTACCATCACCTTTCAGAA
JMSF050N23+ TCTTCAATTCATTCAACAATTCTCTCATCGTGAAAGTTCGGTTACCATCACCTTTCAGAA
JMFF020J04+ TCTTCAATTCATTCAACAATTCTCTCATCGTGAAAGTTCGGTTACCATCACCTTTCAGAA
JMSF047J18+ TCTTCAATTCATTCAACAATTCTCTCATCGTGAAAGTTCGGTTACCATCACCTTTCAGAA
                      ____________________________________________________________
consensus TCTTCAATTCATTCAACAATTCTCTCATCGTGAAAGTTCGGTTACCATCACCTTTCAGAA
 
. : . : . : . : . : . :
JMSF023F24+ GTTTCGAATTGCTATCGACTACATTTGGTTGGCCAGTACGGTCTTCAGAGTCAATAGTCT
JMSF050N23+ GTTTNGAATNGCTATNGACTACATTTGGTTGGCCAGTACGGTNTTCAGAGTCAATAGTCT
JMFF020J04+ GTTTCGAATTGCTATCGACTACATTTGGTTGGCCAGTACGGTCTTCAGAGTCAATAGTCT
JMSF047J18+ GTTTCGAATTGCTATCGACTACATTTGGTTGGCCAGTACGGTCTTCAGAGTCAATAGTCT
                      ____________________________________________________________
consensus GTTTCGAATTGCTATCGACTACATTTGGTTGGCCAGTACGGTCTTCAGAGTCAATAGTCT
 
. : . : . : . : . : . :
JMSF023F24+ TGAGATCTGAATGATTCGCTGGTTCATCCGATTGGATCGAGGATTCGGAAGGCTCCATAT
JMSF050N23+ TGAGATNTGAATGATTCGNTGGTTCATCCGATTGGATCGAGGATTCGGAAGGCTCCATAT
JMFF020J04+ TGAGATCTGAATGATTCGCTGGTTCATCCGATTGGATCGAGGATTCGGAAGGCTCCATAT
JMSF047J18+ TGAGATCTGAATGATTCGCTGGTTCATCCGATTGGATCGAGGATTCGGAAGGCTCCATAT
                      ____________________________________________________________
consensus TGAGATCTGAATGATTCGCTGGTTCATCCGATTGGATCGAGGATTCGGAAGGCTCCATAT
 
. : . : . : . : . : . :
JMSF023F24+ TGGCTGGTTCAGCTTCACCGGAATGAATTTCATTATCCTTCATCTCCGGCGGTTTCGGAT
JMSF050N23+ TGGCTGGTTCAGCTTCACCGGAATGAATTTCATTGTCCTTCATCTCCGGCGGTTTCGGAT
JMFF020J04+ TGGCTGGTTCAGCTTCACCGGAATGAATTTCATTGTCCTTCATCTCCGGCGGTTTCGGAT
JMSF047J18+ TGGCTGGTTCAGCTTCACCGGAATGAATTTCATTGTCCTTCATCTCCGGCGGTTTCGGAT
                      ____________________________________________________________
consensus TGGCTGGTTCAGCTTCACCGGAATGAATTTCATTGTCCTTCATCTCCGGCGGTTTCGGAT
 
. : . : . : . : . : . :
JMSF023F24+ CTTCCTCGCCAACTGGTGGAGGTCCCGTTGGTTGAATAGTAGCGTCGTCTGGATCGGGCT
JMSF050N23+ CTTCCTCGCCAACTGGTGGAGGTCCCGTTGGTTGAATAGNAGCGTCGTNNGGATCGGGCT
JMFF020J04+ CTTCCTCGCCAACTGGTGGAGGTCCCGTTGGTTGAATAGTAGCGTCGTCTGGATCGGGCT
JMSF047J18+ CTTCCTCGCCAACTGGTGGAGGTCCCGTTGGTTGAATAGTAGCGTCGTCTGGATCGGGCT
                      ____________________________________________________________
consensus CTTCCTCGCCAACTGGTGGAGGTCCCGTTGGTTGAATAGTAGCGTCGTCTGGATCGGGCT
 
. : . : . : . : . : . :
JMSF023F24+ CCGTGGACGATGGTGCAGCCGGTTTCGAGTCAGCGTTCAGCGGTGGTGTTGGCGATTCTG
JMSF050N23+ CCGTGGACGATGGNGCAGCCGGTTTCGAGTCAGCGTTCAGCGGTGNTGTNGGCGATTNTG
JMFF020J04+ CCGTGGACGATGGTGCAGCCGGTTTCGAGTCAGCGTTCAGCGGTGGTGTTGGCGATTCTG
JMSF047J18+ CCGTGGACGATGGTGCAGCCGGTTTCGAGTCAGCGTTCAGCGGTGGTGTTGGCGATTCTG
                      ____________________________________________________________
consensus CCGTGGACGATGGTGCAGCCGGTTTCGAGTCAGCGTTCAGCGGTGGTGTTGGCGATTCTG
 
. : . : . : . : . : . :
JMSF023F24+ CGGGGGCGGATTCCGGTGATCCATTTTGTGATTCAAGCTGTTGTGCAGTTGAAGACATGG
JMSF050N23+ CGGGGGCGGATTCCGGTGATCCATTTTGTGATNCAAGCTGNNGTGCAGTTGAAGACATGG
JMFF020J04+ CGGGGGCGGATTCCGGTGATCCATTTTGTGATTCAAGCTGTTGTGCAGTTGAAGACATGG
JMSF047J18+ CGGGGGCGGATTCCGGTGATCCATTTTGTGATTCAAGCTGTTGTGCAGTTGAAGACATGG
                      ____________________________________________________________
consensus CGGGGGCGGATTCCGGTGATCCATTTTGTGATTCAAGCTGTTGTGCAGTTGAAGACATGG
 
. : . : . : . : . : . :
JMSF023F24+ CGATGAGGAAACAACGGGATACAGTTACTCT
JMSF050N23+ CGATGAGGAAACAACGGGATACAGTTACTCT
JMFF020J04+ CGATGAGGAAACAACGGGATACAGTTACTCT
JMSF047J18+ CGATGAGGAAACAACGGGATACAGTTACTCTGGTCTGAGGTGAAAGATAACGGCATATCC
                      ____________________________________________________________
consensus CGATGAGGAAACAACGGGATACAGTTACTCTGGTCTGAGGTGAAAGATAACGGCATATCC