| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF020J04 | Sequence | 570 | 003881 (4) | ref|XP_006343787.1| | 73.9 | PREDICTED: uncharacterized protein LOC102590733 [Solanum tuberosum] | 155 | 012779 (5) | |||
| JMSF023F24 | Sequence | 646 | 003881 (4) | ref|XP_009587677.1| | 126 | PREDICTED: uncharacterized protein LOC104085370 [Nicotiana tomentosiformis] | 734 | 012779 (5) | ref|XP_009587677.1| | 389 | PREDICTED: uncharacterized protein LOC104085370 [Nicotiana tomentosiformis] |
| JMSF047J18 | Sequence | 707 | 003881 (4) | ref|XP_009587677.1| | 151 | PREDICTED: uncharacterized protein LOC104085370 [Nicotiana tomentosiformis] | 738 | 012779 (5) | ref|XP_009587677.1| | 355 | PREDICTED: uncharacterized protein LOC104085370 [Nicotiana tomentosiformis] |
| JMSF050N23 | Sequence | 538 | 003881 (4) | gb|EYU33479.1| | 6e-06 | hypothetical protein MIMGU_mgv1a0044082mg, partial [Erythranthe guttata] | 684 | 012779 (5) | ref|XP_009587677.1| | 319 | PREDICTED: uncharacterized protein LOC104085370 [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
JMSF023F24+ TTCTGGATTTCGCT
JMSF047J18+ AACTAGTGCCCAGTTGTAGAGTGCATCGTAATCTTCTGGATTTCGCT
____________________________________________________________
consensus AACTAGTGCCCAGTTGTAGAGTGCATCGTAATCTTCTGGATTTCGCT
. : . : . : . : . : . :
JMSF023F24+ CTAGTGCACTAGCATACCTCCGGGCAGCATATGTAAGGATTCGTTGGCGAGACCGGCCCT
JMSF047J18+ CTAGTGCACTAGCATACCTCCGGGCAGCATATGTAAGGATTCGTTGGCGAGACCGGCCCT
____________________________________________________________
consensus CTAGTGCACTAGCATACCTCCGGGCAGCATATGTAAGGATTCGTTGGCGAGACCGGCCCT
. : . : . : . : . : . :
JMSF023F24+ CCTCATCAGCACCTGTGACATTGTTGATCAGCTCCAAGGCAGCATCAGTGTGATCTGTGC
JMSF050N23+ CAAGGCAGCATCAGTGTGATCTGTGC
JMFF020J04+ TCATCAGCACCTGTGACATTGTTGATCAGCTCCAAGGCAGCATCAGTGTGATCTGTGC
JMSF047J18+ CCTCATCAGCACCTGTGACATTGTTGATCAGCTCCAAGGCAGCATCAGTGTGATCTGTGC
____________________________________________________________
consensus CCTCATCAGCACCTGTGACATTGTTGATCAGCTCCAAGGCAGCATCAGTGTGATCTGTGC
. : . : . : . : . : . :
JMSF023F24+ GATTGCTTTCCTGACTGCGAGGGGTGCCAGCGTCGCGCGCTTCGGAATCTTCACCACCAT
JMSF050N23+ GATTGCTTTCCTGACTNCGAGGGGTGCCAGCGTCGCGCGCTTCGGAATCTTCACCACCAT
JMFF020J04+ GATTGCTTTCCTGACTGCGAGGGGTGCCAGCGTCGCGCGCTTCGGAATCTTCACCACCAT
JMSF047J18+ GATTGCTTTCCTGACTGCGAGGGGTGCCAGCGTCGCGCGCTTCGGAATCTTCACCACCAT
____________________________________________________________
consensus GATTGCTTTCCTGACTGCGAGGGGTGCCAGCGTCGCGCGCTTCGGAATCTTCACCACCAT
. : . : . : . : . : . :
JMSF023F24+ TCTTCAATTCATTCAACAATTCTCTCATCGTGAAAGTTCGGTTACCATCACCTTTCAGAA
JMSF050N23+ TCTTCAATTCATTCAACAATTCTCTCATCGTGAAAGTTCGGTTACCATCACCTTTCAGAA
JMFF020J04+ TCTTCAATTCATTCAACAATTCTCTCATCGTGAAAGTTCGGTTACCATCACCTTTCAGAA
JMSF047J18+ TCTTCAATTCATTCAACAATTCTCTCATCGTGAAAGTTCGGTTACCATCACCTTTCAGAA
____________________________________________________________
consensus TCTTCAATTCATTCAACAATTCTCTCATCGTGAAAGTTCGGTTACCATCACCTTTCAGAA
. : . : . : . : . : . :
JMSF023F24+ GTTTCGAATTGCTATCGACTACATTTGGTTGGCCAGTACGGTCTTCAGAGTCAATAGTCT
JMSF050N23+ GTTTNGAATNGCTATNGACTACATTTGGTTGGCCAGTACGGTNTTCAGAGTCAATAGTCT
JMFF020J04+ GTTTCGAATTGCTATCGACTACATTTGGTTGGCCAGTACGGTCTTCAGAGTCAATAGTCT
JMSF047J18+ GTTTCGAATTGCTATCGACTACATTTGGTTGGCCAGTACGGTCTTCAGAGTCAATAGTCT
____________________________________________________________
consensus GTTTCGAATTGCTATCGACTACATTTGGTTGGCCAGTACGGTCTTCAGAGTCAATAGTCT
. : . : . : . : . : . :
JMSF023F24+ TGAGATCTGAATGATTCGCTGGTTCATCCGATTGGATCGAGGATTCGGAAGGCTCCATAT
JMSF050N23+ TGAGATNTGAATGATTCGNTGGTTCATCCGATTGGATCGAGGATTCGGAAGGCTCCATAT
JMFF020J04+ TGAGATCTGAATGATTCGCTGGTTCATCCGATTGGATCGAGGATTCGGAAGGCTCCATAT
JMSF047J18+ TGAGATCTGAATGATTCGCTGGTTCATCCGATTGGATCGAGGATTCGGAAGGCTCCATAT
____________________________________________________________
consensus TGAGATCTGAATGATTCGCTGGTTCATCCGATTGGATCGAGGATTCGGAAGGCTCCATAT
. : . : . : . : . : . :
JMSF023F24+ TGGCTGGTTCAGCTTCACCGGAATGAATTTCATTATCCTTCATCTCCGGCGGTTTCGGAT
JMSF050N23+ TGGCTGGTTCAGCTTCACCGGAATGAATTTCATTGTCCTTCATCTCCGGCGGTTTCGGAT
JMFF020J04+ TGGCTGGTTCAGCTTCACCGGAATGAATTTCATTGTCCTTCATCTCCGGCGGTTTCGGAT
JMSF047J18+ TGGCTGGTTCAGCTTCACCGGAATGAATTTCATTGTCCTTCATCTCCGGCGGTTTCGGAT
____________________________________________________________
consensus TGGCTGGTTCAGCTTCACCGGAATGAATTTCATTGTCCTTCATCTCCGGCGGTTTCGGAT
. : . : . : . : . : . :
JMSF023F24+ CTTCCTCGCCAACTGGTGGAGGTCCCGTTGGTTGAATAGTAGCGTCGTCTGGATCGGGCT
JMSF050N23+ CTTCCTCGCCAACTGGTGGAGGTCCCGTTGGTTGAATAGNAGCGTCGTNNGGATCGGGCT
JMFF020J04+ CTTCCTCGCCAACTGGTGGAGGTCCCGTTGGTTGAATAGTAGCGTCGTCTGGATCGGGCT
JMSF047J18+ CTTCCTCGCCAACTGGTGGAGGTCCCGTTGGTTGAATAGTAGCGTCGTCTGGATCGGGCT
____________________________________________________________
consensus CTTCCTCGCCAACTGGTGGAGGTCCCGTTGGTTGAATAGTAGCGTCGTCTGGATCGGGCT
. : . : . : . : . : . :
JMSF023F24+ CCGTGGACGATGGTGCAGCCGGTTTCGAGTCAGCGTTCAGCGGTGGTGTTGGCGATTCTG
JMSF050N23+ CCGTGGACGATGGNGCAGCCGGTTTCGAGTCAGCGTTCAGCGGTGNTGTNGGCGATTNTG
JMFF020J04+ CCGTGGACGATGGTGCAGCCGGTTTCGAGTCAGCGTTCAGCGGTGGTGTTGGCGATTCTG
JMSF047J18+ CCGTGGACGATGGTGCAGCCGGTTTCGAGTCAGCGTTCAGCGGTGGTGTTGGCGATTCTG
____________________________________________________________
consensus CCGTGGACGATGGTGCAGCCGGTTTCGAGTCAGCGTTCAGCGGTGGTGTTGGCGATTCTG
. : . : . : . : . : . :
JMSF023F24+ CGGGGGCGGATTCCGGTGATCCATTTTGTGATTCAAGCTGTTGTGCAGTTGAAGACATGG
JMSF050N23+ CGGGGGCGGATTCCGGTGATCCATTTTGTGATNCAAGCTGNNGTGCAGTTGAAGACATGG
JMFF020J04+ CGGGGGCGGATTCCGGTGATCCATTTTGTGATTCAAGCTGTTGTGCAGTTGAAGACATGG
JMSF047J18+ CGGGGGCGGATTCCGGTGATCCATTTTGTGATTCAAGCTGTTGTGCAGTTGAAGACATGG
____________________________________________________________
consensus CGGGGGCGGATTCCGGTGATCCATTTTGTGATTCAAGCTGTTGTGCAGTTGAAGACATGG
. : . : . : . : . : . :
JMSF023F24+ CGATGAGGAAACAACGGGATACAGTTACTCT
JMSF050N23+ CGATGAGGAAACAACGGGATACAGTTACTCT
JMFF020J04+ CGATGAGGAAACAACGGGATACAGTTACTCT
JMSF047J18+ CGATGAGGAAACAACGGGATACAGTTACTCTGGTCTGAGGTGAAAGATAACGGCATATCC
____________________________________________________________
consensus CGATGAGGAAACAACGGGATACAGTTACTCTGGTCTGAGGTGAAAGATAACGGCATATCC