Contig 003876:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011N01Sequence577003876 (6)ref|XP_004134646.1|108PREDICTED: uncharacterized protein LOC101211064 [Cucumis sativus] gb|KGN49417.1|533003876 (6)ref|XP_004134646.1|108PREDICTED: uncharacterized protein LOC101211064 [Cucumis sativus] gb|KGN49417.1|
JMSF047B10Sequence653003876 (6)ref|XP_004134646.1|108PREDICTED: uncharacterized protein LOC101211064 [Cucumis sativus] gb|KGN49417.1|601003876 (6)ref|XP_004134646.1|108PREDICTED: uncharacterized protein LOC101211064 [Cucumis sativus] gb|KGN49417.1|
JMSF049A09Sequence336003876 (6)ref|XP_008439608.1|85.1PREDICTED: uncharacterized protein LOC103484351 [Cucumis melo]481003876 (6)ref|XP_004134646.1|103PREDICTED: uncharacterized protein LOC101211064 [Cucumis sativus] gb|KGN49417.1|

Alignment

This contig is upended


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JMFF011N01-                      GGGGGTCTTCGCGGATCACGATGACCCAACTCCATAATCACATCTCTCC
rJMSF047B10+                 GAGAGGGGGTCTTCGCGGATCACGATGACCCAACTCCATAATCACATCTCTCC
rJMFF011N01+                     GGGGGTCTTCGCGGATCACGATGACCCAACTCCATAATCACATCTCTCC
rJMSF049A09+                 GAGAGGGGGTCTTCGCGGATCACGATGACCCAACTCCATAATCACATCTCTCC
JMSF049A09-                  GAGAGGGGGTCTTCGCGGATCACGATGACCCAACTCCATAATCACATCTCTCC
JMSF047B10-                  GAGAGGGGGTCTTCGCGGATCACGATGACCCAACTCCATAATCACATCTCTCC
                      ____________________________________________________________
consensus                    GAGAGGGGGTCTTCGCGGATCACGATGACCCAACTCCATAATCACATCTCTCC
 
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JMFF011N01-           TCCTCAGCCGCCGCCGTCGTCCACCGATGATTCTCGTCCTCCGCCACCGTCAACCTCCGA
rJMSF047B10+          TCCTCAGCCGCCGCCGTCGTCCACCGATGATTCTCGTCCTCCGCCACCGTCAACCTCCGA
rJMFF011N01+          TCCTCAGCCGCCGCCGTCGTCCACCGATGATTCTCGTCCTCCGCCACCGTCAACCTCCGA
rJMSF049A09+          TCCTCAGCCGCCGCCGTCGTCCACCGATGATTNTCGTCCTCCGCCACCGTCAACCTCCGA
JMSF049A09-           TCCTCAGCCGCCGCCGTCGTCCACCGATGATTCTCGTCCTCCGCCACCGTCAACCTCCGA
JMSF047B10-           TCCTCAGCCGCCGCCGTCGTCCACCGATGATTCTCGTCCTCCGCCACCGTCAACCTCCGA
                      ____________________________________________________________
consensus             TCCTCAGCCGCCGCCGTCGTCCACCGATGATTCTCGTCCTCCGCCACCGTCAACCTCCGA
 
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JMFF011N01-           TGAGCCCAGTGCTGAGCCTCCCAGAGACGCACCTCCTCCTCCTCGATTCGACCCTAGCCG
rJMSF047B10+          TGAGCCCAGTGCTGAGCCTCCCAGAGACGCACCTCCTCCTCCTCGATTCGACCCTAGCCG
rJMFF011N01+          TGAGCCCAGTGCTGAGCCTCCCAGAGACGCACCTCCTCCTCCTCGATTCGACCCTAGCCG
rJMSF049A09+          TGAGCCCAGTGNTGAGCCTCCCAGAGACGCACCTCCTCCTCCTCGATTCGACCCTAGCCG
JMSF049A09-           TGAGCCCAGTGCTGAGCCTCCCAGAGACGCNCCTCCTCCTCCTCGATTCGACCCTAGCCG
JMSF047B10-           TGAGCCCAGTGCTGAGCCTCCCAGAGACGCACCTCCTCCTCCTCGATTCGACCCTAGCCG
                      ____________________________________________________________
consensus             TGAGCCCAGTGCTGAGCCTCCCAGAGACGCACCTCCTCCTCCTCGATTCGACCCTAGCCG
 
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JMFF011N01-           AATGATTGGTATTATTAGAAGGAAGGCATTGATAAAAGATTTGGCAGCCGTATACCATGC
rJMSF047B10+          AATGATTGGTATTATTAGAAGGAAGGCATTGATAAAAGATTTGGCAGCCGTATACCATGC
rJMFF011N01+          AATGATTGGTATTATTAGAAGGAAGGCATTGATAAAAGATTTGGCAGCCGTATACCATGC
rJMSF049A09+          AATGATTGGTATTATTAGAAGGAAGGCATTGATAAAAGATTTGGCAGCCGTATACCATGC
JMSF049A09-           AATGATTGGNATTATTAGAAGGAAGGCATTGATAAAAGATTTGGCAGCCGTATACCATGN
JMSF047B10-           AATGATTGGTATTATTAGAAGGAAGGCATTGATAAAAGATTTGGCAGCCGTATACCATGC
                      ____________________________________________________________
consensus             AATGATTGGTATTATTAGAAGGAAGGCATTGATAAAAGATTTGGCAGCCGTATACCATGC
 
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JMFF011N01-           AGAGTGCCTTACATATTGTCAACAACTTTTGGAACTCCAAAGAAAATTTGAAGAGCCACA
rJMSF047B10+          AGAGTGCCTTACATATTGTCAACAACTTTTGGAACTCCAAAGAAAATTTGAAGAGCCACA
rJMFF011N01+          AGAGTGCCTTACATATTGTCAACAACTTTTGGAACTCCAAAGAAAATTTGAAGAGCCACA
rJMSF049A09+          AGAGTGCCTTACATATNGTCAACAACTTTTGGAACTCCAAAGAAAATTTGAAGAGCCACA
JMSF049A09-           NNAGTGCCTTACATATTGNCAACNACTTTTGGAACTCCAAAGAAAATTTGAAGAGCCACA
JMSF047B10-           AGAGTGCCTTACATATTGTCAACAACTTTTGGAACTCCAAAGAAAATTTGAAGAGCCACA
                      ____________________________________________________________
consensus             AGAGTGCCTTACATATTGTCAACAACTTTTGGAACTCCAAAGAAAATTTGAAGAGCCACA
 
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JMFF011N01-           TATAGAGATTAAGGCTCCAGAAGACACAAGGAAAGAGATGGCAAGGCCCACAAAGCGCAT
rJMSF047B10+          TATAGAGATTAAGGCTCCAGAAGACACAAGGAAAGAGATGGCAAGGCCCACAAAGCGCAT
rJMFF011N01+          TATAGAGATTAAGGCTCCAGAAGACACAAGGAAAGAGATGGCAAGGCCCACAAAGCGCAT
rJMSF049A09+          TATAGAGATTAAGGCTCCAGAAGACACAAGGAAAGAGATGGCAAGGCCCACAAAGCGCAT
JMSF049A09-           TATANAGATTAAGGCTCCAGAAGACACTAGGAAAGAGATGG                   
JMSF047B10-           TATAGAGATTAAGGCTCCAGAAGACACAAGGAAAGAGATGGCAAGGCCCACAAAGCGCAT
                      ____________________________________________________________
consensus             TATAGAGATTAAGGCTCCAGAAGACACAAGGAAAGAGATGGCAAGGCCCACAAAGCGCAT
 
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JMFF011N01-           GAAGAAAACTCGTTAGGTGTTAAACTTCAAGTGTTTGGCAGCTTGATTCATTCCTTTTTA
rJMSF047B10+          GAAGAAAACTCGTTAGGTGTTAAACTTCAAGTGTTTGGCAGCTTGATTCATTCCTTTTTA
rJMFF011N01+          GAAGAAAACTCGTTAGGTGTTAAACTTCAAGTGTTTGGCAGCTTGATTCATTCCTTTTTA
rJMSF049A09+          GAAGAAAACTCGTTAGGTGTTAAACTTCAAGTGTTTGGCAGCTTGATTCATTCCTTTTTA
JMSF047B10-           GAAGAAAACTCGTTAGGTGTTAAACTTCAAGTGTTTGGCAGCTTGATTCATTCCTTTTTA
                      ____________________________________________________________
consensus             GAAGAAAACTCGTTAGGTGTTAAACTTCAAGTGTTTGGCAGCTTGATTCATTCCTTTTTA
 
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JMFF011N01-           AGATTCACTTCTCTACCCATCTTATCAGCAAGAAATCAAAGCTTATTTGGTATTGTAGAG
rJMSF047B10+          AGATTCACTTCTCTACCCATCTTATCAGCAAGAAATCAAAGCTTATTTGGTATTGTAGAG
rJMFF011N01+          AGATTCACTTCTCTACCCATCTTATCAGCAAGAAATCAAAGCTTATTTGGTATTGTAGAG
rJMSF049A09+          AGATTCACTTCTCTACCCATCTTATCAGCAAGAAATCAAAGCTTATTTGGTATTGTTGAG
JMSF047B10-           AGATTCACTTCTCTACCCATCTTATCAGCAAGAAATCAAAGCTTATTTGGTATTGTAGAG
                      ____________________________________________________________
consensus             AGATTCACTTCTCTACCCATCTTATCAGCAAGAAATCAAAGCTTATTTGGTATTGTAGAG
 
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JMFF011N01-           TTGCCAAAACCAATTGACTGATAAATGAGTAGTTCTAAAACTATAGTCTCCAGAAGTATA
rJMSF047B10+          TTGCCAAAACCAATTGACTGATAAATGAGTAGTTCTAAAACTATAGTCTCCAGAAGTATA
rJMFF011N01+          TTGCCAAAACCAATTGACTGATAAATGAGTAGTTCTAAAACTATAGTCTCCAGAAGTATA
rJMSF049A09+          TTGCCA                                                      
JMSF047B10-           TTGCCAAAACCAATTGACTGATAAATGAGTAGTTCTAAAACTATAGTCTCCAGAAGTATA
                      ____________________________________________________________
consensus             TTGCCAAAACCAATTGACTGATAAATGAGTAGTTCTAAAACTATAGTCTCCAGAAGTATA
 
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JMFF011N01-           CTTTTCATTAGCTTCAAAGAAGTAGTTTTTTCTTGTGGAAA                   
rJMSF047B10+          CTTTTCATTAGCTTCAAAGAAGTAGTTTTTTCTTGTGGAAATATGCATCTGTTATTTGTA
rJMFF011N01+          CTTT                                                        
JMSF047B10-           CTTTTCATTAGCTTCAAAGAAGTAGTTTTTTCTTGTGGAAATATGCATCTGTTATTTGTA
                      ____________________________________________________________
consensus             CTTTTCATTAGCTTCAAAGAAGTAGTTTTTTCTTGTGGAAATATGCATCTGTTATTTGTA
 
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rJMSF047B10+          CAGACCTT                                                    
JMSF047B10-           CAGACCTTTTCTAGATAAAATTCTTCAACAATCTATGATTCTTCTCTAACAAAAAAAAAA
                      ____________________________________________________________
consensus             CAGACCTTTTCTAGATAAAATTCTTCAACAATCTATGATTCTTCTCTAACAAAAAAAAAA