Contig 003874:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF046O05+                                         CTTTCCAGTTCCCTGACAAGATTCATTCCT
                      ____________________________________________________________
consensus                                           CTTTCCAGTTCCCTGACAAGATTCATTCCT
 
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JMSF046O05+           TTTCACCATGACTTCATGATGCTGCATAACATGGCGCGAAAGGCGTTCAGCAATTCTATC
                      ____________________________________________________________
consensus             TTTCACCATGACTTCATGATGCTGCATAACATGGCGCGAAAGGCGTTCAGCAATTCTATC
 
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JMFS102G09+                                          TCAAAATATGCCAGTTCATTCTCATCAGT
JMSF046O05+           CAACTGTGCTAATCTAGAAGCAGCCTTTTCTTCAAAATATGCCAGTTCATTCTCATCAGT
                      ____________________________________________________________
consensus             CAACTGTGCTAATCTAGAAGCAGCCTTTTCTTCAAAATATGCCAGTTCATTCTCATCAGT
 
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JMFS102G09+           TGGAATATGCTCCAAAACATGCCTTACAGGATCAAAATCCTCTTCATAAAATTCTTCCTC
JMSF046O05+           TGGAATATGCTCCAAAACATGCCTTACAGGATCAAAATCCTCTTCATAAAATTCTTCCTC
                      ____________________________________________________________
consensus             TGGAATATGCTCCAAAACATGCCTTACAGGATCAAAATCCTCTTCATAAAATTCTTCCTC
 
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JMFS102G09+           AAGGTCATTCAACACTTTGGAAGGTCTGCTCCCATATATTGAGCTTAATTCTTCAGAGCT
JMSF046O05+           AAGGTCATTCAACACTTTGGAAGGTCTGCTCCCATATATTGAGCTTAATTCTTCAGAGCT
                      ____________________________________________________________
consensus             AAGGTCATTCAACACTTTGGAAGGTCTGCTCCCATATATTGAGCTTAATTCTTCAGAGCT
 
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JMFS102G09+           TGATGAAAGACTATGCCTTTGATGAGGAGGTAGTGCAGCAAGAACACGTGCAACAGCAGC
JMSF046O05+           TGATGAAAGACTATGCCTTTGATGAGGAGGTAGTGCAGCAAGAACACGTGCAACAGCAGC
                      ____________________________________________________________
consensus             TGATGAAAGACTATGCCTTTGATGAGGAGGTAGTGCAGCAAGAACACGTGCAACAGCAGC
 
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JMFS102G09+           TGCCGCTGCAGCTCGTGCTGGAACCTCAGGGCGATCGGAAGGAGAAGCGGGAAGAAGGCC
JMSF046O05+           TGCCGCTGCAGCTCGTGCTGGAACCTCAGGGCGATCGGAAGGAGAAGCGGGAAGAAGGCC
                      ____________________________________________________________
consensus             TGCCGCTGCAGCTCGTGCTGGAACCTCAGGGCGATCGGAAGGAGAAGCGGGAAGAAGGCC
 
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JMFS102G09+           AAGAGATCGGGCGGAGCGAACGGAACTGAAGATCTTCTCTCCAACCTTAGACAAGTCCAT
JMSF046O05+           AAGAGATCGGGCGGAGCGAACGGAACTGAAGATCTTCTCTCCAACCTTAGACAAGTCCAT
                      ____________________________________________________________
consensus             AAGAGATCGGGCGGAGCGAACGGAACTGAAGATCTTCTCTCCAACCTTAGACAAGTCCAT
 
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JMFS102G09+           GCCGCCAGCAGTACCGCCTGGGGATGAGAAGAGCAGGGAGCCCAAGAACAAATACCTGGA
JMSF046O05+           GCCGCCAGCAGTACCGCCTGGGGATGAGAAGAGCAGGGAGCCCAAGAACAAATACCTGGA
                      ____________________________________________________________
consensus             GCCGCCAGCAGTACCGCCTGGGGATGAGAAGAGCAGGGAGCCCAAGAACAAATACCTGGA
 
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JMFS102G09+           AAGCTCAAACCCGCCTTCGCTCAATTCAGCACCATTGAACAACGTAAGTGGAATCAGAGG
JMSF046O05+           AAGCTCAAACCCGCCTTCGCTCAATTCAGCACCATTGAACAACGTAAGTGGAATCAGAGG
                      ____________________________________________________________
consensus             AAGCTCAAACCCGCCTTCGCTCAATTCAGCACCATTGAACAACGTAAGTGGAATCAGAGG
 
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JMFS102G09+           GAAAGGCAGCGAGTTGGACTGCATTTCAGTTCGAATCGGGCCTTGACGGCCGCATTTCTC
JMSF046O05+           GAAAGGCAGCGAGTTGGACTGCATTTCAGTTCGAATCGGGCCTTGACGGCCGCATTTCTC
                      ____________________________________________________________
consensus             GAAAGGCAGCGAGTTGGACTGCATTTCAGTTCGAATCGGGCCTTGACGGCCGCATTTCTC
 
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JMFS102G09+           CGAGATCGGATTGGAATTTCAGTGGAAGAAGTGAAGAAATATAGAAGCGTATCAAAAGGG
JMSF046O05+           CGAGATCGGATTGGAATTTCAGTGGAAGAAGTGAAGAAATATAGAAGCGTATCAAAGGGG
                      ____________________________________________________________
consensus             CGAGATCGGATTGGAATTTCAGTGGAAGAAGTGAAGAAATATAGAAGCGTATCAAAGGGG
 
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JMFS102G09+           TGGTGTTCGTGTTCAGATCAGGAGCTCCGGCTCACAAAAGT                   
JMSF046O05+           TGGTGTTCGTGTTCAGATCAGGAGCTCCGGCTCACAAAAGTGTTTGGTGGAAATTTTGTC
                      ____________________________________________________________
consensus             TGGTGTTCGTGTTCAGATCAGGAGCTCCGGCTCACAAAAGTGTTTGGTGGAAATTTTGTC