Contig 003874:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS102G09Sequence610003874 (2)dbj|BAF36336.1|3e-46hypothetical protein [Ipomoea trifida]
JMSF046O05Sequence750003874 (2)dbj|BAF36336.1|6e-69hypothetical protein [Ipomoea trifida]618012753 (2)dbj|BAF36339.1|4e-93hypothetical protein [Ipomoea trifida]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF046O05+ CTTTCCAGTTCCCTGACAAGATTCATTCCT
                      ____________________________________________________________
consensus CTTTCCAGTTCCCTGACAAGATTCATTCCT
 
. : . : . : . : . : . :
JMSF046O05+ TTTCACCATGACTTCATGATGCTGCATAACATGGCGCGAAAGGCGTTCAGCAATTCTATC
                      ____________________________________________________________
consensus TTTCACCATGACTTCATGATGCTGCATAACATGGCGCGAAAGGCGTTCAGCAATTCTATC
 
. : . : . : . : . : . :
JMFS102G09+ TCAAAATATGCCAGTTCATTCTCATCAGT
JMSF046O05+ CAACTGTGCTAATCTAGAAGCAGCCTTTTCTTCAAAATATGCCAGTTCATTCTCATCAGT
                      ____________________________________________________________
consensus CAACTGTGCTAATCTAGAAGCAGCCTTTTCTTCAAAATATGCCAGTTCATTCTCATCAGT
 
. : . : . : . : . : . :
JMFS102G09+ TGGAATATGCTCCAAAACATGCCTTACAGGATCAAAATCCTCTTCATAAAATTCTTCCTC
JMSF046O05+ TGGAATATGCTCCAAAACATGCCTTACAGGATCAAAATCCTCTTCATAAAATTCTTCCTC
                      ____________________________________________________________
consensus TGGAATATGCTCCAAAACATGCCTTACAGGATCAAAATCCTCTTCATAAAATTCTTCCTC
 
. : . : . : . : . : . :
JMFS102G09+ AAGGTCATTCAACACTTTGGAAGGTCTGCTCCCATATATTGAGCTTAATTCTTCAGAGCT
JMSF046O05+ AAGGTCATTCAACACTTTGGAAGGTCTGCTCCCATATATTGAGCTTAATTCTTCAGAGCT
                      ____________________________________________________________
consensus AAGGTCATTCAACACTTTGGAAGGTCTGCTCCCATATATTGAGCTTAATTCTTCAGAGCT
 
. : . : . : . : . : . :
JMFS102G09+ TGATGAAAGACTATGCCTTTGATGAGGAGGTAGTGCAGCAAGAACACGTGCAACAGCAGC
JMSF046O05+ TGATGAAAGACTATGCCTTTGATGAGGAGGTAGTGCAGCAAGAACACGTGCAACAGCAGC
                      ____________________________________________________________
consensus TGATGAAAGACTATGCCTTTGATGAGGAGGTAGTGCAGCAAGAACACGTGCAACAGCAGC
 
. : . : . : . : . : . :
JMFS102G09+ TGCCGCTGCAGCTCGTGCTGGAACCTCAGGGCGATCGGAAGGAGAAGCGGGAAGAAGGCC
JMSF046O05+ TGCCGCTGCAGCTCGTGCTGGAACCTCAGGGCGATCGGAAGGAGAAGCGGGAAGAAGGCC
                      ____________________________________________________________
consensus TGCCGCTGCAGCTCGTGCTGGAACCTCAGGGCGATCGGAAGGAGAAGCGGGAAGAAGGCC
 
. : . : . : . : . : . :
JMFS102G09+ AAGAGATCGGGCGGAGCGAACGGAACTGAAGATCTTCTCTCCAACCTTAGACAAGTCCAT
JMSF046O05+ AAGAGATCGGGCGGAGCGAACGGAACTGAAGATCTTCTCTCCAACCTTAGACAAGTCCAT
                      ____________________________________________________________
consensus AAGAGATCGGGCGGAGCGAACGGAACTGAAGATCTTCTCTCCAACCTTAGACAAGTCCAT
 
. : . : . : . : . : . :
JMFS102G09+ GCCGCCAGCAGTACCGCCTGGGGATGAGAAGAGCAGGGAGCCCAAGAACAAATACCTGGA
JMSF046O05+ GCCGCCAGCAGTACCGCCTGGGGATGAGAAGAGCAGGGAGCCCAAGAACAAATACCTGGA
                      ____________________________________________________________
consensus GCCGCCAGCAGTACCGCCTGGGGATGAGAAGAGCAGGGAGCCCAAGAACAAATACCTGGA
 
. : . : . : . : . : . :
JMFS102G09+ AAGCTCAAACCCGCCTTCGCTCAATTCAGCACCATTGAACAACGTAAGTGGAATCAGAGG
JMSF046O05+ AAGCTCAAACCCGCCTTCGCTCAATTCAGCACCATTGAACAACGTAAGTGGAATCAGAGG
                      ____________________________________________________________
consensus AAGCTCAAACCCGCCTTCGCTCAATTCAGCACCATTGAACAACGTAAGTGGAATCAGAGG
 
. : . : . : . : . : . :
JMFS102G09+ GAAAGGCAGCGAGTTGGACTGCATTTCAGTTCGAATCGGGCCTTGACGGCCGCATTTCTC
JMSF046O05+ GAAAGGCAGCGAGTTGGACTGCATTTCAGTTCGAATCGGGCCTTGACGGCCGCATTTCTC
                      ____________________________________________________________
consensus GAAAGGCAGCGAGTTGGACTGCATTTCAGTTCGAATCGGGCCTTGACGGCCGCATTTCTC
 
. : . : . : . : . : . :
JMFS102G09+ CGAGATCGGATTGGAATTTCAGTGGAAGAAGTGAAGAAATATAGAAGCGTATCAAAAGGG
JMSF046O05+ CGAGATCGGATTGGAATTTCAGTGGAAGAAGTGAAGAAATATAGAAGCGTATCAAAGGGG
                      ____________________________________________________________
consensus CGAGATCGGATTGGAATTTCAGTGGAAGAAGTGAAGAAATATAGAAGCGTATCAAAGGGG
 
. : . : . : . : . : . :
JMFS102G09+ TGGTGTTCGTGTTCAGATCAGGAGCTCCGGCTCACAAAAGT
JMSF046O05+ TGGTGTTCGTGTTCAGATCAGGAGCTCCGGCTCACAAAAGTGTTTGGTGGAAATTTTGTC
                      ____________________________________________________________
consensus TGGTGTTCGTGTTCAGATCAGGAGCTCCGGCTCACAAAAGTGTTTGGTGGAAATTTTGTC