| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS015B03 | Sequence | 566 | 003873 (7) | ref|XP_009765985.1| | 5e-24 | PREDICTED: cation/H(+) antiporter 18-like [Nicotiana sylvestris] | |||||
| JMFS025C07 | Sequence | 619 | 003873 (7) | ref|XP_004245552.1| | 2e-35 | PREDICTED: cation/H(+) antiporter 18-like isoform X1 [Solanum lycopersicum] | |||||
| JMFS051G05 | Sequence | 467 | 003873 (7) | ref|XP_008341283.1| | 4e-40 | PREDICTED: cation/H(+) antiporter 18-like [Malus domestica] ref|XP_008341284.1| | |||||
| JMFS082A06 | Sequence | 620 | 003873 (7) | ref|XP_004245552.1| | 2e-35 | PREDICTED: cation/H(+) antiporter 18-like isoform X1 [Solanum lycopersicum] | |||||
| JMFS095D05 | Sequence | 595 | 003873 (7) | ref|XP_004245552.1| | 5e-32 | PREDICTED: cation/H(+) antiporter 18-like isoform X1 [Solanum lycopersicum] | |||||
| JMSF001C01 | Sequence | 255 | 003873 (7) | 751 | 005583 (2) | ref|XP_009766374.1| | 1e-76 | PREDICTED: cation/H(+) antiporter 18-like [Nicotiana sylvestris] ref|XP_00976637 | |||
| JMSF046N20 | Sequence | 594 | 003873 (7) | ref|XP_009334473.1| | 1e-21 | PREDICTED: cation/H(+) antiporter 18 [Pyrus x bretschneideri] | 668 | 005583 (2) | ref|XP_009766374.1| | 1e-76 | PREDICTED: cation/H(+) antiporter 18-like [Nicotiana sylvestris] ref|XP_00976637 |
This contig is upended
. : . : . : . : . : . :
JMFS025C07+ CAAGCCCCCCAAGAAACAGAAA
____________________________________________________________
consensus CAAGCCCCCCAAGAAACAGAAA
. : . : . : . : . : . :
JMFS051G05+ CCCAGATTCGCCAAGGTATCTTACACCGTCAGGCTCCTCGGAGGAAACAC
JMFS025C07+ GAACAGGAGACCCAGATTCGCCAAGGTATCTAACACCGTCAGGCTCCTCGGAGGAAACAC
JMFS095D05+ ACACCGTCAGGCTCCTCGGAGGAAACAC
JMFS082A06+ CCCAGATTCGCCAAGGTATCTAACACCGTCAGGCTCCTCGGAGGAAACAC
JMSF046N20+ C
____________________________________________________________
consensus GAACAGGAGACCCAGATTCGCCAAGGTATCTAACACCGTCAGGCTCCTCGGAGGAAACAC
. : . : . : . : . : . :
JMFS051G05+ CGTATTCAGATAGTCTTTGTTCCTCCCTATCGCCGATGGACCAAGCAAAACCCCTCCAAT
JMFS025C07+ CGTATTCAGATAGTCTTTGTTCCTCCCTAACGCCGATGGACCAAGCAAAACCCCTCCAAT
JMFS095D05+ CGTATTCAGATAGTCTTTGTTCCTCCCTAACGCCGATGGACCAAGCAAAACCCCTCCAAT
JMFS082A06+ CGTATTCAGATAGTCTTTGTTCCTCCCTAACGCCGATGGACCAAGCAAAACCCCTCCAAT
JMFS015B03+ TTGTTCCTCCCTAACGCCGATGGACCAAGCAAAACCCCTCCAAT
JMSF046N20+ CGTATTCAGATAGTCTTTGTTCCTCCCTAACGCCGATGGACCAAGCAAAACCCCTCCAAT
____________________________________________________________
consensus CGTATTCAGATAGTCTTTGTTCCTCCCTAACGCCGATGGACCAAGCAAAACCCCTCCAAT
. : . : . : . : . : . :
JMFS051G05+ AATCTCAGCAATGACGCGAGGCTGTCTGAGTGGTCGGAGAATATAGGCGAGCACTCGGGT
JMFS025C07+ AATCTCAGCAATGACGCGAGGCTGTCTGAGTGGTCGGAGAATATAGGCGAGCACTCGGGT
JMFS095D05+ AATCTCAGCAATGACGCGAGGCTGTCTGAGTGGTCGGAGAATATAGGCGAGCACTCGGGT
JMFS082A06+ AATCTCAGCAATGACGCGAGGCTGTCTGAGTGGTCGGAGAATATAGGCGAGCACTCGGGT
JMFS015B03+ AATCTCAGCAATGACGCGAGGCTGTCTGAGTGGTCGGAGAATATAGGCGAGCACTCGGGT
JMSF046N20+ AATNTCAGCAATGACGCGAGGCTGTCTGAGTGGTCGGAGAATATAGGCGAGCNCTCGGGT
____________________________________________________________
consensus AATCTCAGCAATGACGCGAGGCTGTCTGAGTGGTCGGAGAATATAGGCGAGCACTCGGGT
. : . : . : . : . : . :
JMFS051G05+ GAGATCAACGTCCAGACATATCTGCAGAATTAGCAGAGTAAGGGCATAGTCTAAGGGACT
JMFS025C07+ GAGAACAACGACCAGACATATCTGCAGAATTAGCAGAGGAAGGGCATAGTCTAAGGGACT
JMFS095D05+ GAGAACAACGACCAGACATATCTGCAGAATTAGCAGAGGAAGGGCATAGTCTAAGGGACT
JMFS082A06+ GAGAACAACGACCAGACATATCTGCAGAATTAGCAGAGGAAGGGCATAGTCTAAGGGACT
JMFS015B03+ GAGAACAACGACCAGACATATCTGCAGAATTAGCAGAGGAAGGGCATAGTCTAAGGGACT
JMSF046N20+ GAGAACAACGACCNGACATATNTGCAGAATTAGCNGAGGAAGGGCATAGTNTAAGGGACT
____________________________________________________________
consensus GAGAACAACGACCAGACATATCTGCAGAATTAGCAGAGGAAGGGCATAGTCTAAGGGACT
. : . : . : . : . : . :
JMFS051G05+ GTCTCCTTGTAATGAACCATTAGAGGTTGCCTTCATAGGGCTACATTNAACTGTGCCATT
JMFS025C07+ GTCTCCTTGAAATGAACCATTAGAGGTTGCCTTCATAGGGCTACATTTAACTGTGCCATT
JMFS095D05+ GTCTCCTTGAAATGAACCATTAGAGGTTGCCTTCATAGGGCTACATTTAACTGTGCCATT
JMFS082A06+ GTCTCCTTGAAATGAACCATTAGAGGTTGCCTTCATAGGGCTACATTTAACTGTGCCATT
JMFS015B03+ GTCTCCTTGAAATGAACCATTAGAGGTTGCCTTCATAGGGCTACATTTAACTGTGCCATT
JMSF046N20+ GTCTCCNTGAAATGAACCNTTAGAGGTTGCCTTCATAGGGNTACNTTTAACTGTGCCNTT
____________________________________________________________
consensus GTCTCCTTGAAATGAACCATTAGAGGTTGCCTTCATAGGGCTACATTTAACTGTGCCATT
. : . : . : . : . : . :
JMFS051G05+ CGTAACCATTTTTATTTTGACCTCAAAATTCCAATTCCTTATTTCTCGATCCTCTCCTCT
JMFS025C07+ CGTAACCATTTTTATTTTGACCTCAAAATTCCAATTCCTTATTTCTCGATCCTCTCCTCT
JMFS095D05+ CGTAACCATTTTTATTTTGACCTCAAAATTCCAATTCCTTATTTCTCGATCCTCTCCTCT
JMFS082A06+ CGTAACCATTTTTATTTTGACCTCAAAATTCCAATTCCTTATTTCTCGATCCTCTCCTCT
JMFS015B03+ CGTAACCATTTTTATTTTGACCTCAAAATTCCAATTCCTTATTTCTCGATCCTCTCCTCT
JMSF046N20+ NGTAACCNTTTTTATTTTGACCTCAAAATTCCAATTCCTTATTTCTCGATCCTCTCCTCT
____________________________________________________________
consensus CGTAACCATTTTTATTTTGACCTCAAAATTCCAATTCCTTATTTCTCGATCCTCTCCTCT
. : . : . : . : . : . :
JMFS051G05+ AACTG------CTTGAGAATTGAAGTTGGAGAAAATTTATGAGGGATTTGTATGAT
JMFS025C07+ AA---------CTTGAGAATTGAAGTTGGAGAAAATCTATGAGGGAATTGAATGATCTCA
JMFS095D05+ AA---------CTTGAGAATTGAAGTTGGAGAAAATCTATGAGGGAATTGAATGATCTCA
JMFS082A06+ AACTG------CTTGAGAATTGAAGTTGGAGAAAATCTATGAGGGAATTGAATGATCTCA
JMFS015B03+ AACTGCTGAACCTTGAGAATTGAAGTTGGAGAAAATCTATGAGGGAATTGAATGATCTCA
JMSF001C01+ GGGAATTGAATGATCTCA
JMSF046N20+ AACTG------CTTGAGAATTGAAGTTGGAGAAAATCTATGAGGGAATTGAATGATCTCN
____________________________________________________________
consensus AACTG------CTTGAGAATTGAAGTTGGAGAAAATCTATGAGGGAATTGAATGATCTCA
. : . : . : . : . : . :
JMFS025C07+ CTGCAGCACTTACTCCCTTCAGTTGCCCAGAAGAAAATATATAACGATCAAGAAAAGCAA
JMFS095D05+ CTGCAGCACTTACTCCCTTCAGTTGCCCAGAAGAAAATATATAACGATCAAGAAAAGCAA
JMFS082A06+ CTGCAGCACTTACTCCCTTCAGTTGCCCAGAAGAAAATATATAACGATCAAGAAAAGCAA
JMFS015B03+ CTGCAGCACTTACTCCCTTCAGTTGCCCAGAAGAAAATATATAACGATCAAGAAAAGCAA
JMSF001C01+ CTGCAGCACTTACTCCCTTCAGTTGCCCAGAAGAAAATATATAACGATCNAGAAAAGCAA
JMSF046N20+ CTGCAGCNCTTACTCCCTTCAGTTGCCCNGAAGAAAATATATAACGATCAAGAAAAGCAA
____________________________________________________________
consensus CTGCAGCACTTACTCCCTTCAGTTGCCCAGAAGAAAATATATAACGATCAAGAAAAGCAA
. : . : . : . : . : . :
JMFS025C07+ ATTTATTTCTTTTTAA-TTTTTTTTTTTGGAGTTGAAATATAATTCTTGGGTTTTAAAGC
JMFS095D05+ ATTTATTTCTTTTTAA-TTTTTTTTTTTGGAGTTGAAATATAATTCTTGGGTTTTAAAGC
JMFS082A06+ ATTTATTTCTTTTTAATTTTTTTTTTTTGGAGTTGAAATATAATTCTTGGGTTTTAAAGC
JMFS015B03+ ATTTATTTCTTTTTAA-TTTTTTTTTTTGGAGTTGAAATATAATTCTTGGGTTTTAAAGC
JMSF001C01+ ATTTATTTCTTTTTAA-TTTTTTTTTTTGGAGTTGAAATATAATTCTTGGGTTTTAAAGC
JMSF046N20+ ATTTATTTCTTTTTAA-TTTTTTTTTTTGGAGTTGAAATATAATTCTTGGGTTTTAAAGC
____________________________________________________________
consensus ATTTATTTCTTTTTAA-TTTTTTTTTTTGGAGTTGAAATATAATTCTTGGGTTTTAAAGC
. : . : . : . : . : . :
JMFS025C07+ AGTGGATGGGCTGAAGATGAGAGCGAGAGAGAGAGAGAGAAAAAGGTACTGAAAATGCTC
JMFS095D05+ AGTGGATGGGCTGAAGATGAGAGCGAGAGAGAGAGAGAGAAAAAGGTACTGAAAATGCTC
JMFS082A06+ AGTGGATGGGCTGAAGATGAGAGCGAGAGAGAGAGAGAGAAAAAGGTACTGAAAATGCTC
JMFS015B03+ AGTGGATGGGCTGAAGATGAGAGCGAGAGAGAGAGAGAGAAAAAGGTACTGAAAATGCTC
JMSF001C01+ AGTGGATGGGCTGAAGATGAGAGCGAGAGAGAGAGAGAGAAAAAGGTACTGAAAATGCTC
JMSF046N20+ AGTGGATGGGCTGAAGATGAGAGCGAGAGAGAGAGAGAGAAAAAGGTACTGAAAATGCTC
____________________________________________________________
consensus AGTGGATGGGCTGAAGATGAGAGCGAGAGAGAGAGAGAGAAAAAGGTACTGAAAATGCTC
. : . : . : . : . : . :
JMFS025C07+ AGAGATA
JMFS095D05+ AGAGATATGATTGTGGAGCTATGGAGATGGTAA
JMFS082A06+ AGAGATATGATTGTGGAGCTATGGAGATGGTAAGA
JMFS015B03+ AGAGATATGATTGTGGAGCTATGGAGATGGTAAGAGAGAAATA
JMSF001C01+ AGAGATATGATTGTGGAGCTATGGAGATGGTAAGAGAGAAATATGAACCGAAGACTC
JMSF046N20+ AGAGATATGATTGTGGAGCTATGGAGATGGTAAGAGAGAAATATGAACCGAAGACTCATC
____________________________________________________________
consensus AGAGATATGATTGTGGAGCTATGGAGATGGTAAGAGAGAAATATGAACCGAAGACTCATC