Contig 003872:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF015G14+                                         TCACCAAACTCAGTGGGTATGCTTCCAGTG
JMSF046K21+                                         TCACCAAACTCAGTGGGTATGCTTCCAGTG
                      ____________________________________________________________
consensus                                           TCACCAAACTCAGTGGGTATGCTTCCAGTG
 
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JMSF015G14+           AGCTGGTTATAACATAATTGTAGAACTTGTAAGCTAGCCATTTTTCCAAGTTGAAGAGGA
JMSF046K21+           AGCTGGTTATAACATAATTGTAGAACTTGTAAGCTAGCCATTTTTCCAAGTTGAAGAGGA
                      ____________________________________________________________
consensus             AGCTGGTTATAACATAATTGTAGAACTTGTAAGCTAGCCATTTTTCCAAGTTGAAGAGGA
 
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JMFS097B11+                   TGAAAGATTATTGACATTCAAGTAGAGATCGCTGAGCTTAGTCAAGTTTGCA
JMSF015G14+           ATCTCCCCTGAAAGATTATTGACATTCAAGTAGAGATCGCTGAGCTTAGTCAAGTTTGCA
JMSF046K21+           ATCTCCCCTGAAAGATTATTGACATTCAAGTAGAGATCGCTGAGCTTAGTCAAGTTTGCA
                      ____________________________________________________________
consensus             ATCTCCCCTGAAAGATTATTGACATTCAAGTAGAGATCGCTGAGCTTAGTCAAGTTTGCA
 
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JMFS097B11+           ATCTCTGGGGGTATCTCCCCATACAAGGAGTTGTAGTGCAAGTACAGCCCCGTCAAGTGC
JMSF015G14+           ATCTCTGGGGGTATCTCCCCATACAAGGAGTTGTAGTGCAAGTACAGCCCCGTCAAGTGC
JMSF046K21+           ATCTCTGGGGGTATCTCCCCATACAAGGAGTTGTAGTGCAAGTACAGCCCCGTCAAGTGC
                      ____________________________________________________________
consensus             ATCTCTGGGGGTATCTCCCCATACAAGGAGTTGTAGTGCAAGTACAGCCCCGTCAAGTGC
 
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JMFS097B11+           TCGAGCCGTCCCACCGCCGGCGACAGCTTCCCGGAGAGCCCTCTTCCCTGGAGCGAAATG
JMSF015G14+           TCGAGCCGTCCCACCGCCGGCGACAGCTTCCCGGAGAGCCCTCTTCCCTGGAGCGAAATG
JMSF046K21+           TCGAGCCGTCCCACCGCCGGCGACAGCTTCCCGGAGAGCCCTCTTCCCTGGAGCGAAATG
                      ____________________________________________________________
consensus             TCGAGCCGTCCCACCGCCGGCGACAGCTTCCCGGAGAGCCCTCTTCCCTGGAGCGAAATG
 
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JMFS097B11+           TTAGCCACTTGACCCTGCTCATTGCACGCCACTCCTTCAAAGGAACGATCGCACGGGTCC
JMSF015G14+           TTAGCCACTTGACCCTGCTCATTGCACGCCACTCCTTCAAAGGAACGATCGCACGGGTCC
JMSF046K21+           TTAGCCACTTGACCCTGCTCATTGCACGCCACTCCTTCAAAGGAACGATCGCACGGGTCC
                      ____________________________________________________________
consensus             TTAGCCACTTGACCCTGCTCATTGCACGCCACTCCTTCAAAGGAACGATCGCACGGGTCC
 
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JMFS097B11+           CCTGAAACGGTCCAAGAACTCAGCAATGCGTTTTCCGGGTCAATACTCGCCTTCAAGTCC
JMSF015G14+           CCTGAAACGGTCCAAGAACTCAGCAATGCGTTTTCCGGGTCAATACTCGCCTTCAAGTCC
JMSF046K21+           CCTGAAACGGTCCAAGAACTCAGCAATGCGTTTTCCGGGTCAATACTCGCCTTCAAGTCC
                      ____________________________________________________________
consensus             CCTGAAACGGTCCAAGAACTCAGCAATGCGTTTTCCGGGTCAATACTCGCCTTCAAGTCC
 
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JMFS097B11+           ATCAGAGCTCTTAGCTCAGCATTTCCACATACAGATGGCGCCCAGCAGAGGGCGGTGAAC
JMSF015G14+           ATCAGAGCTCTTAGCTCAGCATTTCCACATACAGATGGCGCCCAGCAGAGGGCGGTGAAC
JMSF046K21+           ATCAGAGCTCTTAGCTCAGCATTTCCACATACAGATGGCGCCCAGCAGAGGGCGGTGAAC
                      ____________________________________________________________
consensus             ATCAGAGCTCTTAGCTCAGCATTTCCACATACAGATGGCGCCCAGCAGAGGGCGGTGAAC
 
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JMFS097B11+           AGCAGAGCAAGATACAAGAGTAAAGAAGAAAGACCCATTTCTTCGATCAACAATGGCGGA
JMSF015G14+           AGCAGAGCAAGATACAAGAGTAAAGAAGAAAGACCCATTTCTTCGATCAACAATGGCGGA
JMSF046K21+           AGCAGAGCAAGATACAAGAGTAAAGAAGAAAGACCCATTTCTTCGATCAACAATGGCGGA
                      ____________________________________________________________
consensus             AGCAGAGCAAGATACAAGAGTAAAGAAGAAAGACCCATTTCTTCGATCAACAATGGCGGA
 
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JMFS097B11+           AAGTGAAGCTAGCAGCTAGCTTTCTCCCTTCAGAAATGTACCACCTGCTTTTCAGTCACT
JMSF015G14+           AAGTGAAGCTAGCAGCTAGCTTTCTCCCTTCAGAAATGTACCACCT              
JMSF046K21+           AAGTGAAGCTAGCAGCTAGCTTTCTCCCTTCAGAAATGTACCACCTGCTTTTCAGTCACT
                      ____________________________________________________________
consensus             AAGTGAAGCTAGCAGCTAGCTTTCTCCCTTCAGAAATGTACCACCTGCTTTTCAGTCACT
 
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JMFS097B11+           TGTAATTGTCTCTTGAAATAGAACTTTGTTTCTGCTCTCCTTTAATCTTTCTTGTGCTTC
JMSF046K21+           TGTAATTGTCTCTTGAAATAGAACTTTGTTTCTGCTCT-CTTTAATCTTTCTTGTGCTTC
                      ____________________________________________________________
consensus             TGTAATTGTCTCTTGAAATAGAACTTTGTTTCTGCTCTCCTTTAATCTTTCTTGTGCTTC
 
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JMFS097B11+           TGTAATGGTTTGTGGTGTTGTTTTTTTGTTTCTTGGGACCGAGGGAGCCTCTGCAACAAT
JMSF046K21+           TGTAATGGTTTGTGGTGTTGTTTTTTTGTTTCTTGGGACCGAGGGAGCCTCTGCAACAAT
                      ____________________________________________________________
consensus             TGTAATGGTTTGTGGTGTTGTTTTTTTGTTTCTTGGGACCGAGGGAGCCTCTGCAACAAT
 
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JMFS097B11+           GAGAAAGTAACTACTCCCCCCTCTTTCCG                               
JMSF046K21+           GAGAAAGTAACTACTCCCCCCTCTTTCCGACAAGGAGAAGAGACAAAGTTTATGGAGACC
                      ____________________________________________________________
consensus             GAGAAAGTAACTACTCCCCCCTCTTTCCGACAAGGAGAAGAGACAAAGTTTATGGAGACC