Contig 003871:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF046J23Sequence728003871 (2)ref|XP_011099803.1|3e-43PREDICTED: trihelix transcription factor GT-2-like [Sesamum indicum]720012774 (2)ref|XP_004249868.1|2e-52PREDICTED: trihelix transcription factor GT-2-like [Solanum lycopersicum]
JMSF049P17Sequence630003871 (2)ref|XP_011099803.1|1e-43PREDICTED: trihelix transcription factor GT-2-like [Sesamum indicum]802012774 (2)ref|XP_009766495.1|5e-54PREDICTED: trihelix transcription factor GT-2-like [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF049P17+ TTCTTAGCAATCCCTTCTGACGAAGAAGAGGTGGCGGAT
JMSF046J23+ TGGCGGAT
                      ____________________________________________________________
consensus TTCTTAGCAATCCCTTCTGACGAAGAAGAGGTGGCGGAT
 
. : . : . : . : . : . :
JMSF049P17+ GTGGAGGTGGAATTGATGTCCAAACTGAAGTCTCCTGGAGTATGGCAAGGCTGCTGTATT
JMSF046J23+ GTGGAGGTGGAATTGATGTCCAAACTGAAGTCTCCTGGAGTATGGCAAGGCTGCTGTATT
                      ____________________________________________________________
consensus GTGGAGGTGGAATTGATGTCCAAACTGAAGTCTCCTGGAGTATGGCAAGGCTGCTGTATT
 
. : . : . : . : . : . :
JMSF049P17+ CTGAGATGATCTTGGGTTAAGCTTGTGGTGGGTTTTAACATTGTGAGGGGTGTTGCAGGA
JMSF046J23+ CTGAGATGATCTTGGGTTAAGCTTGTGGTGGGTTTTAACATTGTGAGGGGTGTTGCAGGA
                      ____________________________________________________________
consensus CTGAGATGATCTTGGGTTAAGCTTGTGGTGGGTTTTAACATTGTGAGGGGTGTTGCAGGA
 
. : . : . : . : . : . :
JMSF049P17+ GATACCAAGGTTGGTTTTTCCAGGGTATTTTGGTTTTGGATTTGGATTTGATGGGAGGTT
JMSF046J23+ GATACCAAGGTTGGTTTTTCCAGGGTATTTTGGTTTTGGATTTGGATTTGATGGGAGGTT
                      ____________________________________________________________
consensus GATACCAAGGTTGGTTTTTCCAGGGTATTTTGGTTTTGGATTTGGATTTGATGGGAGGTT
 
. : . : . : . : . : . :
JMSF049P17+ AAAGAGTGGTGGGTGTCAAAAAGCTCCAAGTGCTGGAAGAATCTGTAATTTTTGGCATTT
JMSF046J23+ AAAGAGTGGTGGGTGTCAAAAAGCTCCAAGTGCTGGAAGAATCTGTAATTTTTGGCATTT
                      ____________________________________________________________
consensus AAAGAGTGGTGGGTGTCAAAAAGCTCCAAGTGCTGGAAGAATCTGTAATTTTTGGCATTT
 
. : . : . : . : . : . :
JMSF049P17+ TGTCGTCTACCACTACCAGATCGGCCTTCCTTTGTTCTCTTGTGATACTTGTAGATGTTG
JMSF046J23+ TGTCGTCTACCACTACCAGATCGGCCTTCCTTTGTTCTCTTGTGATACTTGTAGATGTTG
                      ____________________________________________________________
consensus TGTCGTCTACCACTACCAGATCGGCCTTCCTTTGTTCTCTTGTGATACTTGTAGATGTTG
 
. : . : . : . : . : . :
JMSF049P17+ TCGAATTTCTCTTTGCACTTCTTAGCATTTCGATGATATCCAAGTTCCCCCATTTTCCTG
JMSF046J23+ TCGAATTTCTCTTTGCACTTCTTAGCATTTCGATGATATCCAAGTTCCCCCATTTTCCTG
                      ____________________________________________________________
consensus TCGAATTTCTCTTTGCACTTCTTAGCATTTCGATGATATCCAAGTTCCCCCATTTTCCTG
 
. : . : . : . : . : . :
JMSF049P17+ GAGACTTCATCCCATAGAGGAGCTTTGTGAGAGGAGGAGTCACGAAATGCAAGGTCCATT
JMSF046J23+ GAGACTTCATCCCATAGAGGAGCTTTGTGAGAGGAGGAGTCACGAAATGCAAGGTCCATT
                      ____________________________________________________________
consensus GAGACTTCATCCCATAGAGGAGCTTTGTGAGAGGAGGAGTCACGAAATGCAAGGTCCATT
 
. : . : . : . : . : . :
JMSF049P17+ TGAGACCTTATGTTGAGCAAAGCCAGTGTTTCTTCACGGGGCCACCTGTTCCCACCTGAA
JMSF046J23+ TGAGACCTTATGTTGAGCAAAGCCAGTGTTTCTTCACGGGGCCACCTGTTCCCACCTGAA
                      ____________________________________________________________
consensus TGAGACCTTATGTTGAGCAAAGCCAGTGTTTCTTCACGGGGCCACCTGTTCCCACCTGAA
 
. : . : . : . : . : . :
JMSF049P17+ TTCCACTCACCGTCTTCTCCTCCGCCTTCATTGTTCTTCTTCAGCTCCGCAGCTCCTCCT
JMSF046J23+ TTCCACTCACCGTCTTCTCCTCCGCCTTCATTGTTCTTCTTCAGCTCCGCAGCTCCTCCT
                      ____________________________________________________________
consensus TTCCACTCACCGTCTTCTCCTCCGCCTTCATTGTTCTTCTTCAGCTCCGCAGCTCCTCCT
 
. : . : . : . : . : . :
JMSF049P17+ CCTCCTCCATCATCGCTTGAATTTTGCAACAACACTGGAGTTTCCAGCA
JMSF046J23+ CCTCCTCCATCATCGCTTGAATTTTGCAACAACACTGGAGTTACCAGCATATCTACTACT
                      ____________________________________________________________
consensus CCTCCTCCATCATCGCTTGAATTTTGCAACAACACTGGAGTTTCCAGCATATCTACTACT
 
. : . : . : . : . : . :
JMSF046J23+ GGAACTGGGAGGGGTTATTAAAGCTGCTGAGATTTTTGTTTTACCTTTGTTGTGGAGGTG
                      ____________________________________________________________
consensus GGAACTGGGAGGGGTTATTAAAGCTGCTGAGATTTTTGTTTTACCTTTGTTGTGGAGGTG
 
. : . : . : . : . : . :
JMSF046J23+ AAATTTATTGGATGGGTAATTATAAAGTTTAATCGTCTGGACCAAAACGTGTAACCAACC
                      ____________________________________________________________
consensus AAATTTATTGGATGGGTAATTATAAAGTTTAATCGTCTGGACCAAAACGTGTAACCAACC