Contig 003868:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN017G04Sequence613003868 (2)ref|XP_009599377.1|2e-98PREDICTED: probable prolyl 4-hydroxylase 9 isoform X1 [Nicotiana tomentosiformi
JMSF046E07Sequence782003868 (2)ref|XP_009599379.1|3e-81PREDICTED: probable prolyl 4-hydroxylase 9 isoform X2 [Nicotiana tomentosiformi

Alignment

This contig is upended


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JMFN017G04+                                                              AAAAAAATT
                      ____________________________________________________________
consensus                                                                AAAAAAATT
 
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JMFN017G04+           GAACTATTTCCTCATTATGATACAGGGAATATCTTTCACAAATGGTGACAAAAAAGAACT
                      ____________________________________________________________
consensus             GAACTATTTCCTCATTATGATACAGGGAATATCTTTCACAAATGGTGACAAAAAAGAACT
 
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JMFN017G04+           AAATAATATATTCACTAGGCAACATTGTTATTGGCAGAATTGTGGGGGGGGGGGGGGGGG
                      ____________________________________________________________
consensus             AAATAATATATTCACTAGGCAACATTGTTATTGGCAGAATTGTGGGGGGGGGGGGGGGGG
 
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JMFN017G04+           GTGGCATTTAGTCATCTTGTTCTTGATCCCTGATCCACTTTGTTGCCACCCATTTTTGTC
                      ____________________________________________________________
consensus             GTGGCATTTAGTCATCTTGTTCTTGATCCCTGATCCACTTTGTTGCCACCCATTTTTGTC
 
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JMFN017G04+           CTTTGATCACTGGACAGCTCCCATGAAGCGAGGTTGGATCGATTGTGCCATTTAGAAGAA
                      ____________________________________________________________
consensus             CTTTGATCACTGGACAGCTCCCATGAAGCGAGGTTGGATCGATTGTGCCATTTAGAAGAA
 
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JMFN017G04+           GCGAGTAGAATAGAAGTCCATCCCCTTTGCGGGGCTTTACTTTTAAACCTTCACACCTGC
JMSF046E07+                                                                     GC
                      ____________________________________________________________
consensus             GCGAGTAGAATAGAAGTCCATCCCCTTTGCGGGGCTTTACTTTTAAACCTTCACACCTGC
 
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JMFN017G04+           GGAAGTCATAATTACCATCCATGTTCTGTCCATACTCAAAAGGGAACATGGTTTCCCCAC
JMSF046E07+           GGAAGTCATAATTACCATCCATGTTCTGTCCATACTCAAAAGGGAACATGGTTTCCCCAC
                      ____________________________________________________________
consensus             GGAAGTCATAATTACCATCCATGTTCTGTCCATACTCAAAAGGGAACATGGTTTCCCCAC
 
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JMFN017G04+           CTTCTTCAACATCTGAAAGGTATAACAAGAATGAAGCAACCCTTTGGCTCTTCTGTGGGC
JMSF046E07+           CTTCTTCAACATCTGAAAGGTATAACAAGAATGAAGCAACCCTTTGGCTCTTCTGTGGGC
                      ____________________________________________________________
consensus             CTTCTTCAACATCTGAAAGGTATAACAAGAATGAAGCAACCCTTTGGCTCTTCTGTGGGC
 
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JMFN017G04+           CATATTCAGCGGGATTGAATGCGTCATAATGAGAATGATAGCTTTGGCCAATTTCATAGC
JMSF046E07+           CATATTCAGCGGGATTGAATGCGTCATAATGAGAATGATAGCTTTGGCCAATTTCATAGC
                      ____________________________________________________________
consensus             CATATTCAGCGGGATTGAATGCGTCATAATGAGAATGATAGCTTTGGCCAATTTCATAGC
 
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JMFN017G04+           GCAAAACATTAAATGCCTCTCCATGGGACCTGGGAATCATTGTCACCTTAGCAATTTTCT
JMSF046E07+           GCAAAACATTAAATGCCTCTCCATGGGACCTGGGAATCATTGTCACCTTAGCAATTTTCT
                      ____________________________________________________________
consensus             GCAAAACATTAAATGCCTCTCCATGGGACCTGGGAATCATTGTCACCTTAGCAATTTTCT
 
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JMFN017G04+           CCTCAATGAGATCCAAAGTTCCTGTTTTGTCTTCTGATGCACTTATAAATGTGCCAGAAC
JMSF046E07+           CCTCAATGAGATCCAAAGTTCCTGTTTTGTCTTCTGATGCACTTATAAATGTGCCAGAAC
                      ____________________________________________________________
consensus             CCTCAATGAGATCCAAAGTTCCTGTTTTGTCTTCTGATGCACTTATAAATGTGCCAGAAC
 
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JMFN017G04+           TTGT                                                        
JMSF046E07+           TTGTTCTTATTCCCTTTGTGTTTTCTGCCGTTTCTCCTTTACGAAGAGCTAAAGATGAAG
                      ____________________________________________________________
consensus             TTGTTCTTATTCCCTTTGTGTTTTCTGCCGTTTCTCCTTTACGAAGAGCTAAAGATGAAG
 
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JMSF046E07+           GTTTGAGTTGTTTTTTTGCCATTTTGACAATGCTTTCACATTGCTCTGAAAGGGGATGAG
                      ____________________________________________________________
consensus             GTTTGAGTTGTTTTTTTGCCATTTTGACAATGCTTTCACATTGCTCTGAAAGGGGATGAG
 
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JMSF046E07+           AGACATTGAATCCTCTCCCGTCTCGCCGTGCGGCAGCGGATCAAAATCTCGCCACGTATC
                      ____________________________________________________________
consensus             AGACATTGAATCCTCTCCCGTCTCGCCGTGCGGCAGCGGATCAAAATCTCGCCACGTATC
 
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JMSF046E07+           CACCGACTCCAGCATCCTAGACCTCGCCCGCATAAATCCTTCATCCTGCTGAGAGAAGAG
                      ____________________________________________________________
consensus             CACCGACTCCAGCATCCTAGACCTCGCCCGCATAAATCCTTCATCCTGCTGAGAGAAGAG
 
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JMSF046E07+           GGAGGAGCCGAAGAAACCGGCGAGGAAGAAGCAGAGGCATAAGAGAAAAACGAACGGCAA
                      ____________________________________________________________
consensus             GGAGGAGCCGAAGAAACCGGCGAGGAAGAAGCAGAGGCATAAGAGAAAAACGAACGGCAA
 
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JMSF046E07+           CCCTAGGGTCCTCCATCCACCTCCGACCAATTTGCCTCTGTTGCTCGTCTTCATCAATGA
                      ____________________________________________________________
consensus             CCCTAGGGTCCTCCATCCACCTCCGACCAATTTGCCTCTGTTGCTCGTCTTCATCAATGA
 
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JMSF046E07+           ATCTTCCCCTCTGAACTCAACGCCAGCAATTAACGAATTCCGAGTTTGGTTATGAAATTA
                      ____________________________________________________________
consensus             ATCTTCCCCTCTGAACTCAACGCCAGCAATTAACGAATTCCGAGTTTGGTTATGAAATTA
 
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JMSF046E07+           TGGATCTGTAATAAGCAATGAGCTATGAAGAAGAAGGGAGCGGAGAGTGTAAAGACGCCC
                      ____________________________________________________________
consensus             TGGATCTGTAATAAGCAATGAGCTATGAAGAAGAAGGGAGCGGAGAGTGTAAAGACGCCC