Contig 003866:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF013F09Sequence260003866 (3)747005813 (3)gb|KJB52888.1|2e-85hypothetical protein B456_008G282000 [Gossypium raimondii]
JMSF045K02Sequence774003866 (3)ref|XP_009784249.1|3e-94PREDICTED: phosphoglucomutase, chloroplastic isoform X2 [Nicotiana sylvestris]809005813 (3)sp|Q9SM59.1|PGMP_PEA3e-89RecName: Full=Phosphoglucomutase, chloroplastic; Short=PGM; AltName: Full=Gluco
JMSF050A20Sequence694003866 (3)ref|XP_009784250.1|2e-74PREDICTED: phosphoglucomutase, chloroplastic isoform X3 [Nicotiana sylvestris]737005813 (3)gb|KJB52888.1|1e-108hypothetical protein B456_008G282000 [Gossypium raimondii]

Alignment

This contig is upended


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JMSF045K02+                 CAGAAATAGAAAGCGTGTTCCCATATATTTTGTCAGTAATGGATTCTGGTGCTG
                      ____________________________________________________________
consensus                   CAGAAATAGAAAGCGTGTTCCCATATATTTTGTCAGTAATGGATTCTGGTGCTG
 
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JMSF050A20+                                     ATGCCCCAATCATATTCTGGACCACCAGGATTAT
JMSF045K02+           GTTGACCACTGCTGTAATTGAACTTGATGCCCCAATCATATTCTGGACCACCAGGATTAT
                      ____________________________________________________________
consensus             GTTGACCACTGCTGTAATTGAACTTGATGCCCCAATCATATTCTGGACCACCAGGATTAT
 
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JMSF050A20+           GGCTTGCACTCATTATAAAGCCACCATTAGCCTCTCTCTTTCGTATCACAGCAGACACAG
JMSF045K02+           GGCTTGCACTCATTATAAAGCCACCATTAGCCTCTCTCTTTCGTATCACAGCAGACACAG
                      ____________________________________________________________
consensus             GGCTTGCACTCATTATAAAGCCACCATTAGCCTCTCTCTTTCGTATCACAGCAGACACAG
 
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JMSF050A20+           CTGGAGTAGACATTATTCCATCCTTGCCAATCATAATTTGACCAACCCCATTGCCAGCAG
JMSF045K02+           CTGGAGTAGACATTATTCCATCCTTGCCAATCATAATTTGACCAACCCCATTGCCAGCAG
                      ____________________________________________________________
consensus             CTGGAGTAGACATTATTCCATCCTTGCCAATCATAATTTGACCAACCCCATTGCCAGCAG
 
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JMSF050A20+           CAATTTTAATGATTAACTGTGCAGCTTCGCGATTAAAATATCGGCCATCACCTCCGAGAA
JMSF045K02+           CAATTTTAATGATTAACTGTGCAGCTTCGCGATTAAAATATCGGCCATCACCTCCGAGAA
                      ____________________________________________________________
consensus             CAATTTTAATGATTAACTGTGCAGCTTCGCGATTAAAATATCGGCCATCACCTCCGAGAA
 
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JMSF050A20+           CCAACAACTTGTCCTTATAATCATCAAGCTCCAACGAATTAAACAATGCCTGAATCCAAT
JMSF045K02+           CCAACAACTTGTCCTTATAATCATCAAGCTCCAACGAATTAAACAATGCCTGAATCCAAT
                      ____________________________________________________________
consensus             CCAACAACTTGTCCTTATAATCATCAAGCTCCAACGAATTAAACAATGCCTGAATCCAAT
 
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JMSF050A20+           TTGCAAGGTAATTATCTTGCATAAAAACTTTAACCTTCTTACGGAGCCCGCTAGTTCCCG
JMSF045K02+           TTGCAAGGTAATTATCTTGCATAAAAACTTTAACCTTCTTACGGAGCCCGCTAGTTCCCG
                      ____________________________________________________________
consensus             TTGCAAGGTAATTATCTTGCATAAAAACTTTAACCTTCTTACGGAGCCCGCTAGTTCCCG
 
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JMSF050A20+           TCTTCTGTCCTTCAATTGGCTTTGTCGGAACCGATTTAATCTTGAGTGCTTGAGATTCGG
JMSF045K02+           TCTTCTGTCCTTCAATTGGCTTTGTCGGAACCGATTTAATCTTGAGTGCTTGAGATTCGG
                      ____________________________________________________________
consensus             TCTTCTGTCCTTCAATTGGCTTTGTCGGAACCGATTTAATCTTGAGTGCTTGAGATTCGG
 
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JMSF050A20+           CGACGGTAGCGGAAGGAGAAGAGGAGGAGGAAGAAGGAGATGAAGAAGAAGAAGCGGCGA
JMSF013F09+                GTAGCCGAAGGAGAAGAGGAGGAGGAAGAAGGAGATGAAGAAGAAGAAGCGGCGA
JMSF045K02+           CGACGGTAGCGGAAGGAGAAGAGGAGGAGGAAGAAGGAGATGAAGAAGAAGAAGCGGCGA
                      ____________________________________________________________
consensus             CGACGGTAGCGGAAGGAGAAGAGGAGGAGGAAGAAGGAGATGAAGAAGAAGAAGCGGCGA
 
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JMSF050A20+           AGATGGGAGACGAAGAAGAAGAAGAAGGCGCAGTTTTTCTGAGAGGGAAATTAGAGGAAT
JMSF013F09+           AGATGGGAGACGAAGAAGAAGAAGAAGGCGCAGTTTTTCTGAGAGGGAAATTAGAGGAAT
JMSF045K02+           AGATGGGAGACGAAGAAGAAGAAGAAGGCGCAGTTTTTCTGAGAGGGAAATTAGAGGAAT
                      ____________________________________________________________
consensus             AGATGGGAGACGAAGAAGAAGAAGAAGGCGCAGTTTTTCTGAGAGGGAAATTAGAGGAAT
 
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JMSF050A20+           GGGAGTTGAAGAAGGACAGGCATCGGATTGGTGGAGAGAGAGGAAAGGCATTTCTGGCGG
JMSF013F09+           GGGAGTTGAAGAAGGACAGGCATCGGATTGGTGGAGAGAGAGGAAAGGCATTTCTGGCGG
JMSF045K02+           GGGAGTTGAAGAAGGACAGGCATCGGATTGGTGGAGAGAGAGGAAAGGCATTTCTGGCGG
                      ____________________________________________________________
consensus             GGGAGTTGAAGAAGGACAGGCATCGGATTGGTGGAGAGAGAGGAAAGGCATTTCTGGCGG
 
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JMSF050A20+           ATTTGAAATGCTTGGAGATGAAAATGGAGGTCGGATCGATCCTCGCACAAAACGACGCCA
JMSF013F09+           ATTTGAAATGCTTGGAGATGAAAATGGAGGTCGGATCGATCCTCGCACAAAACGACGCCA
JMSF045K02+           ATTTGAAATGCTTGGAGATGAAAATGGAGGTCGGATCGATCCTCGCACAAAACGACGCCA
                      ____________________________________________________________
consensus             ATTTGAAATGCTTGGAGATGAAAATGGAGGTCGGATCGATCCTCGCACAAAACGACGCCA
 
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JMSF050A20+           TGAGAGCAGAGATTGAGAGTGCAGGGAAAAAGAGTTGAAGAAGAGTGTGTGATGATAG  
JMSF013F09+           TGAGAGCAGAGATTGAGAGTGCAG                                    
JMSF045K02+           TGAGAGCAGAGATTGAGAGTGCAGGGAAAAAGAGTTGAAGAAGAGTGTGTGATGATAGTC
                      ____________________________________________________________
consensus             TGAGAGCAGAGATTGAGAGTGCAGGGAAAAAGAGTTGAAGAAGAGTGTGTGATGATAGTC