Contig 003866:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF013F09Sequence260003866 (3)747005813 (3)gb|KJB52888.1|2e-85hypothetical protein B456_008G282000 [Gossypium raimondii]
JMSF045K02Sequence774003866 (3)ref|XP_009784249.1|3e-94PREDICTED: phosphoglucomutase, chloroplastic isoform X2 [Nicotiana sylvestris]809005813 (3)sp|Q9SM59.1|PGMP_PEA3e-89RecName: Full=Phosphoglucomutase, chloroplastic; Short=PGM; AltName: Full=Gluco
JMSF050A20Sequence694003866 (3)ref|XP_009784250.1|2e-74PREDICTED: phosphoglucomutase, chloroplastic isoform X3 [Nicotiana sylvestris]737005813 (3)gb|KJB52888.1|1e-108hypothetical protein B456_008G282000 [Gossypium raimondii]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF045K02+ CAGAAATAGAAAGCGTGTTCCCATATATTTTGTCAGTAATGGATTCTGGTGCTG
                      ____________________________________________________________
consensus CAGAAATAGAAAGCGTGTTCCCATATATTTTGTCAGTAATGGATTCTGGTGCTG
 
. : . : . : . : . : . :
JMSF050A20+ ATGCCCCAATCATATTCTGGACCACCAGGATTAT
JMSF045K02+ GTTGACCACTGCTGTAATTGAACTTGATGCCCCAATCATATTCTGGACCACCAGGATTAT
                      ____________________________________________________________
consensus GTTGACCACTGCTGTAATTGAACTTGATGCCCCAATCATATTCTGGACCACCAGGATTAT
 
. : . : . : . : . : . :
JMSF050A20+ GGCTTGCACTCATTATAAAGCCACCATTAGCCTCTCTCTTTCGTATCACAGCAGACACAG
JMSF045K02+ GGCTTGCACTCATTATAAAGCCACCATTAGCCTCTCTCTTTCGTATCACAGCAGACACAG
                      ____________________________________________________________
consensus GGCTTGCACTCATTATAAAGCCACCATTAGCCTCTCTCTTTCGTATCACAGCAGACACAG
 
. : . : . : . : . : . :
JMSF050A20+ CTGGAGTAGACATTATTCCATCCTTGCCAATCATAATTTGACCAACCCCATTGCCAGCAG
JMSF045K02+ CTGGAGTAGACATTATTCCATCCTTGCCAATCATAATTTGACCAACCCCATTGCCAGCAG
                      ____________________________________________________________
consensus CTGGAGTAGACATTATTCCATCCTTGCCAATCATAATTTGACCAACCCCATTGCCAGCAG
 
. : . : . : . : . : . :
JMSF050A20+ CAATTTTAATGATTAACTGTGCAGCTTCGCGATTAAAATATCGGCCATCACCTCCGAGAA
JMSF045K02+ CAATTTTAATGATTAACTGTGCAGCTTCGCGATTAAAATATCGGCCATCACCTCCGAGAA
                      ____________________________________________________________
consensus CAATTTTAATGATTAACTGTGCAGCTTCGCGATTAAAATATCGGCCATCACCTCCGAGAA
 
. : . : . : . : . : . :
JMSF050A20+ CCAACAACTTGTCCTTATAATCATCAAGCTCCAACGAATTAAACAATGCCTGAATCCAAT
JMSF045K02+ CCAACAACTTGTCCTTATAATCATCAAGCTCCAACGAATTAAACAATGCCTGAATCCAAT
                      ____________________________________________________________
consensus CCAACAACTTGTCCTTATAATCATCAAGCTCCAACGAATTAAACAATGCCTGAATCCAAT
 
. : . : . : . : . : . :
JMSF050A20+ TTGCAAGGTAATTATCTTGCATAAAAACTTTAACCTTCTTACGGAGCCCGCTAGTTCCCG
JMSF045K02+ TTGCAAGGTAATTATCTTGCATAAAAACTTTAACCTTCTTACGGAGCCCGCTAGTTCCCG
                      ____________________________________________________________
consensus TTGCAAGGTAATTATCTTGCATAAAAACTTTAACCTTCTTACGGAGCCCGCTAGTTCCCG
 
. : . : . : . : . : . :
JMSF050A20+ TCTTCTGTCCTTCAATTGGCTTTGTCGGAACCGATTTAATCTTGAGTGCTTGAGATTCGG
JMSF045K02+ TCTTCTGTCCTTCAATTGGCTTTGTCGGAACCGATTTAATCTTGAGTGCTTGAGATTCGG
                      ____________________________________________________________
consensus TCTTCTGTCCTTCAATTGGCTTTGTCGGAACCGATTTAATCTTGAGTGCTTGAGATTCGG
 
. : . : . : . : . : . :
JMSF050A20+ CGACGGTAGCGGAAGGAGAAGAGGAGGAGGAAGAAGGAGATGAAGAAGAAGAAGCGGCGA
JMSF013F09+ GTAGCCGAAGGAGAAGAGGAGGAGGAAGAAGGAGATGAAGAAGAAGAAGCGGCGA
JMSF045K02+ CGACGGTAGCGGAAGGAGAAGAGGAGGAGGAAGAAGGAGATGAAGAAGAAGAAGCGGCGA
                      ____________________________________________________________
consensus CGACGGTAGCGGAAGGAGAAGAGGAGGAGGAAGAAGGAGATGAAGAAGAAGAAGCGGCGA
 
. : . : . : . : . : . :
JMSF050A20+ AGATGGGAGACGAAGAAGAAGAAGAAGGCGCAGTTTTTCTGAGAGGGAAATTAGAGGAAT
JMSF013F09+ AGATGGGAGACGAAGAAGAAGAAGAAGGCGCAGTTTTTCTGAGAGGGAAATTAGAGGAAT
JMSF045K02+ AGATGGGAGACGAAGAAGAAGAAGAAGGCGCAGTTTTTCTGAGAGGGAAATTAGAGGAAT
                      ____________________________________________________________
consensus AGATGGGAGACGAAGAAGAAGAAGAAGGCGCAGTTTTTCTGAGAGGGAAATTAGAGGAAT
 
. : . : . : . : . : . :
JMSF050A20+ GGGAGTTGAAGAAGGACAGGCATCGGATTGGTGGAGAGAGAGGAAAGGCATTTCTGGCGG
JMSF013F09+ GGGAGTTGAAGAAGGACAGGCATCGGATTGGTGGAGAGAGAGGAAAGGCATTTCTGGCGG
JMSF045K02+ GGGAGTTGAAGAAGGACAGGCATCGGATTGGTGGAGAGAGAGGAAAGGCATTTCTGGCGG
                      ____________________________________________________________
consensus GGGAGTTGAAGAAGGACAGGCATCGGATTGGTGGAGAGAGAGGAAAGGCATTTCTGGCGG
 
. : . : . : . : . : . :
JMSF050A20+ ATTTGAAATGCTTGGAGATGAAAATGGAGGTCGGATCGATCCTCGCACAAAACGACGCCA
JMSF013F09+ ATTTGAAATGCTTGGAGATGAAAATGGAGGTCGGATCGATCCTCGCACAAAACGACGCCA
JMSF045K02+ ATTTGAAATGCTTGGAGATGAAAATGGAGGTCGGATCGATCCTCGCACAAAACGACGCCA
                      ____________________________________________________________
consensus ATTTGAAATGCTTGGAGATGAAAATGGAGGTCGGATCGATCCTCGCACAAAACGACGCCA
 
. : . : . : . : . : . :
JMSF050A20+ TGAGAGCAGAGATTGAGAGTGCAGGGAAAAAGAGTTGAAGAAGAGTGTGTGATGATAG
JMSF013F09+ TGAGAGCAGAGATTGAGAGTGCAG
JMSF045K02+ TGAGAGCAGAGATTGAGAGTGCAGGGAAAAAGAGTTGAAGAAGAGTGTGTGATGATAGTC
                      ____________________________________________________________
consensus TGAGAGCAGAGATTGAGAGTGCAGGGAAAAAGAGTTGAAGAAGAGTGTGTGATGATAGTC