Contig 003863:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF011F20Sequence177003863 (2)769001095 (6)ref|XP_006357196.1|220PREDICTED: uncharacterized protein LOC102603984 [Solanum tuberosum]
JMSF045A14Sequence467003863 (2)gb|KJB33995.1|8e-04hypothetical protein B456_006G042500 [Gossypium raimondii]651001095 (6)ref|XP_006357196.1|168PREDICTED: uncharacterized protein LOC102603984 [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF045A14+ CCTGAGACAAGAGCCGCAGTATTAAAATAGGTCTCACCATTTGTTCC
                      ____________________________________________________________
consensus CCTGAGACAAGAGCCGCAGTATTAAAATAGGTCTCACCATTTGTTCC
 
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JMSF045A14+ CACAAATATGAGAACACACATCTGCACATTTACAGTTAAATATGAATCATTTCAGCTAGT
                      ____________________________________________________________
consensus CACAAATATGAGAACACACATCTGCACATTTACAGTTAAATATGAATCATTTCAGCTAGT
 
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JMSF045A14+ AATCTGTAATGTATAGAATGTGGAAACTGGAAAGCTCATTTTGTCCATTTCCTCCAAATT
                      ____________________________________________________________
consensus AATCTGTAATGTATAGAATGTGGAAACTGGAAAGCTCATTTTGTCCATTTCCTCCAAATT
 
. : . : . : . : . : . :
JMSF045A14+ GGTTTCCAGTATAGTTAGATGTATAAGTCCCCTTATCAGTTATCATTAAGCACCAGATAA
                      ____________________________________________________________
consensus GGTTTCCAGTATAGTTAGATGTATAAGTCCCCTTATCAGTTATCATTAAGCACCAGATAA
 
. : . : . : . : . : . :
JMSF045A14+ GCTCAAGAAAATAAAATGCAGATTTTAGGCTGAAACAATAAAAGAGAGGAAGGATTGTGA
                      ____________________________________________________________
consensus GCTCAAGAAAATAAAATGCAGATTTTAGGCTGAAACAATAAAAGAGAGGAAGGATTGTGA
 
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JMSF011F20+ TAAATCAAATGAAAACTNTAACCACAAAGCCCAAATTCCCTGCCACATAGATAG
JMSF045A14+ TATAACTAAATCAAATGAAAACTTTAACCACAAAGCCCAAATTCCCTGCCACATAGATAG
                      ____________________________________________________________
consensus TATAACTAAATCAAATGAAAACTTTAACCACAAAGCCCAAATTCCCTGCCACATAGATAG
 
. : . : . : . : . : . :
JMSF011F20+ GATCCTACAAGGGTAAATCTGGCGACTCAACGGCCNTAGTGCCCACAAAAAACCCACCAT
JMSF045A14+ GATCCTACAAGGGTAAATCTGGCGACTCAACGGCCCTAGTGCCCACAAAAAACCCACCAT
                      ____________________________________________________________
consensus GATCCTACAAGGGTAAATCTGGCGACTCAACGGCCCTAGTGCCCACAAAAAACCCACCAT
 
. : . : . : . : . : . :
JMSF011F20+ ATTGGGTGTAAACTGCCATATTTTTGTTCATGTATCTTTGTTCATAATTTATTACCCATC
JMSF045A14+ ATTGGGTGTAAACTGCCATATTTTTGTTCATGTATCTTTGTTCATAATTTATTACCCATC
                      ____________________________________________________________
consensus ATTGGGTGTAAACTGCCATATTTTTGTTCATGTATCTTTGTTCATAATTTATTACCCATC