Contig 003861:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF050B01+                                        TCCCATACTGATGCACTGGGGAATAGGTTTC
                      ____________________________________________________________
consensus                                          TCCCATACTGATGCACTGGGGAATAGGTTTC
 
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JMSF050B01+           AATCCTGAATGTTTCAGGCAACTGAGGTCTCTCCTCAACAGAGACCGAAGCATTTCCACC
                      ____________________________________________________________
consensus             AATCCTGAATGTTTCAGGCAACTGAGGTCTCTCCTCAACAGAGACCGAAGCATTTCCACC
 
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JMSF050B01+           TGATCTAAGATAGTTCACTCTCAAAGTGGAACTGTTCTCGGGCGGCAAAGGTGTTATTGT
                      ____________________________________________________________
consensus             TGATCTAAGATAGTTCACTCTCAAAGTGGAACTGTTCTCGGGCGGCAAAGGTGTTATTGT
 
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JMSF050B01+           GAAGGATTTTGGCTCAATCGAGATGAAGCCACCCCCAGATTTCACTTTCTTAGCTGGTGT
JMFS163G07+                                 ATGAAGCCACCCCCAGATTTCACTTTCTTAGCTGGTGT
                      ____________________________________________________________
consensus             GAAGGATTTTGGCTCAATCGAGATGAAGCCACCCCCAGATTTCACTTTCTTAGCTGGTGT
 
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JMSF050B01+           GAAAGGCGGGTTGGTAGTGAATGCATCTAACAAGAACTCCCGAGGCTCATCCACCTCAAC
JMFS163G07+           GAAAGGCGGGTTGGTAGTGAATGCATCTAACAAGAACTCCCGAGGCTCATCCACCTCAAC
                      ____________________________________________________________
consensus             GAAAGGCGGGTTGGTAGTGAATGCATCTAACAAGAACTCCCGAGGCTCATCCACCTCAAC
 
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JMSF050B01+           ATAATCTCGAAGAGCAGCCGAAACTCTTTTCATAGACTGGATATAAGCAATGTGACCAGA
JMFS163G07+           ATAATCTCGAAGAGCAGCCGAAACTCTTTTCATAGACTGGATATAAGCAATGTGACCAGA
                      ____________________________________________________________
consensus             ATAATCTCGAAGAGCAGCCGAAACTCTTTTCATAGACTGGATATAAGCAATGTGACCAGA
 
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JMSF050B01+           AGCAAACCTCAACCTGTACTCAACTGCTTCTTTAATGAACTTCTTCCTATCTTTACAAAG
JMFS163G07+           AGCAAACCTCAACCTGTACTCAACTGCTTCTTTAATGAACTTCTTCCTATCTTTACAAAG
                      ____________________________________________________________
consensus             AGCAAACCTCAACCTGTACTCAACTGCTTCTTTAATGAACTTCTTCCTATCTTTACAAAG
 
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JMSF050B01+           CCTCACTGACTCTTCATCATCCACCTTGGATGAAGAACATCCCATTTCTTAACCCCTTAG
JMFS163G07+           CCTCACTGACTCTTCATCATCCACCTTGGATGAAGAACATCCCATTTCTTAACCCCTTAG
JMFS071G08+                                                              ACCCCTTAG
                      ____________________________________________________________
consensus             CCTCACTGACTCTTCATCATCCACCTTGGATGAAGAACATCCCATTTCTTAACCCCTTAG
 
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JMSF050B01+           ATAGGCCTCTAAGAATTCTCCAGACGCAAATCGAAACGAAACTGCCCTCTTACTCTCACC
JMFS163G07+           ATAGGCCTCTAAGAATTCTCCAGACGCAAATCGAAACGAAACTGCCCTCTTACTCTCACC
JMFS071G08+           ATAGGCCTCTAAGAATTCTCCAGACGCAAATCGAAACGAAACTGCCCTCTTACTCTCACC
                      ____________________________________________________________
consensus             ATAGGCCTCTAAGAATTCTCCAGACGCAAATCGAAACGAAACTGCCCTCTTACTCTCACC
 
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JMSF050B01+           ACATTCATACTCAAACTGTTCATAACAAGACGATGAGTTCCCTAAAGAGAATCATAACAA
JMFS163G07+           ACATTCATACTCAAACTGTTCATAACAAGACGATGAGTTCCCTAAAGAGAATCATAACAA
JMFS071G08+           ACATTCATACTCAAACTGTTCATAACAAGACGATGAGTTCCCTAAAGAGAATCATAACAA
JMFS128D01+                                                     TAAAGAGAATCATAACAA
                      ____________________________________________________________
consensus             ACATTCATACTCAAACTGTTCATAACAAGACGATGAGTTCCCTAAAGAGAATCATAACAA
 
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JMSF050B01+           GTGTAGCCAACAAGTAAAGAAAGACACTCACAAAAGCAATACAAAGGCAGCCCCCAAAAA
JMFS163G07+           GTGTAGCCAACAAGTAAAGAAAGACACTCACAAAAGCAATACAAAGGCAGCCCCCAAAAA
JMFS071G08+           GTGTAGCCAACAAGTAAAGAAAGACACTCACAAAAGCAATACAAAGGCAGCCCCCAAAAA
JMFS128D01+           GTGTAGCCAACAAGTAAAGAAAGACACTCACATAAGCAATACAAAGGCAGCCCCCAAAAA
                      ____________________________________________________________
consensus             GTGTAGCCAACAAGTAAAGAAAGACACTCACAAAAGCAATACAAAGGCAGCCCCCAAAAA
 
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JMSF050B01+           ATAATGTT                                                    
JMFS163G07+           ATAATGTTAACAGATACACAGGATTCAGGTTCTTTTCTTAGCCTTCAAGTCTTTGGGAGA
JMFS071G08+           ATAATGTTAACAGATACACAGGATTCAGGTTCTTTTCTTAGCCTTCAAGTCTTTGGGAGA
JMFS128D01+           ATAATGTTAACAGATACACAGGATTCAGGTTCTTTTCTTAGCCTTCAAGTCTTTGGGAGA
                      ____________________________________________________________
consensus             ATAATGTTAACAGATACACAGGATTCAGGTTCTTTTCTTAGCCTTCAAGTCTTTGGGAGA
 
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JMFS163G07+           TTACTAGAAACTCAAATTTGATAAACAATTCAGATAATCTCATGAGAATATAATGCATGA
JMFS071G08+           TTACTAGAAACTCAAATTTGATAAACAATTCAGATAATCTCATGAGAATATAATGCATGA
JMFS128D01+           TTACTAGAAACTCAAATTTGATAAACAATTCAGATAATCTCATGAGAATATAATGCATGA
                      ____________________________________________________________
consensus             TTACTAGAAACTCAAATTTGATAAACAATTCAGATAATCTCATGAGAATATAATGCATGA
 
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JMFS163G07+           AACTTAAACACAAA                                              
JMFS071G08+           AACTTAAACACAAACGACAAAGAAATCTCTTATTAATTACAAAACATCAAGCACTAAAAT
JMFS128D01+           AACTTAAACACAAACGACAAAGAAATCTCTTATTAATTACAAAACATCAAGCACTAAAAT
                      ____________________________________________________________
consensus             AACTTAAACACAAACGACAAAGAAATCTCTTATTAATTACAAAACATCAAGCACTAAAAT
 
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JMFS071G08+           GTCCAAAATTTTGAGCTTTCACACGCATTCTACACCCAAATTTCAGAGCAACAAACCCAT
JMFS128D01+           GTCCAAAATTTTGAGCTTTCACACGCATTCTACACCCAAATTTCAGAGCAACAAACCCAT
                      ____________________________________________________________
consensus             GTCCAAAATTTTGAGCTTTCACACGCATTCTACACCCAAATTTCAGAGCAACAAACCCAT
 
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JMFS071G08+           TCTAAAAAAAAAAAAATCAAAAATTATCATCAATAATTGTCCAAATCAAGTGAAAAAGAG
JMFS128D01+           TCTAAAAAAAAAAAAATCAAAAATTATCATCAATAATTGTCCAAATCAAGTGAAAAAGAG
JMSF044L02+              AAAAAAAAAAAAATCAAAAATTATCATCAATAATTGTCCAAATCAAGTGAAAAAGAG
                      ____________________________________________________________
consensus             TCTAAAAAAAAAAAAATCAAAAATTATCATCAATAATTGTCCAAATCAAGTGAAAAAGAG
 
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JMFS071G08+           AGAGGCTTAAACTCAAACTAACAAAGCATTAAAAACCTAGAACCATTCTGCAATTAAATA
JMFS128D01+           AGAGGCTTAAACTCAAACTAACAAAGCATTAAAAACCTAGAACCATTCTGCAATTAAATA
JMSF044L02+           AGAGGCTTAAACTCAAACTAACAAAGCATTAAAAACCTAGAACCATTCTGCAATTAAATA
                      ____________________________________________________________
consensus             AGAGGCTTAAACTCAAACTAACAAAGCATTAAAAACCTAGAACCATTCTGCAATTAAATA
 
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JMFS071G08+           ACAGTGAGAAACAAGGAGGAGAGAGTAGAATTAAAAAAAAAGACAAATGCAAATAAACAA
JMFS128D01+           ACAGTGAGAAACAAGGAGGAGAGAGTAGAATTAAAAAAAAAGACAAATGCAAATAAACAA
JMSF044L02+           ACAGTGAGAAACAAGGAGGAGAGAGTAGAATTAAAAAAAAAGACAAATGCAAATAAACAA
                      ____________________________________________________________
consensus             ACAGTGAGAAACAAGGAGGAGAGAGTAGAATTAAAAAAAAAGACAAATGCAAATAAACAA
 
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JMFS071G08+           ATGAC                                                       
JMFS128D01+           ATGACAAAAAATCAAAAGAAAATGCGGTTTAGGAAATGGTGGTTCATGATTCCCAACTAA
JMSF044L02+           ATGACAAAAAATCAAAAGAAAATGCGGTTTAGGAAATGGTGGTTCATGATTCCCAACTAA
                      ____________________________________________________________
consensus             ATGACAAAAAATCAAAAGAAAATGCGGTTTAGGAAATGGTGGTTCATGATTCCCAACTAA
 
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JMFS128D01+           TT                                                          
JMSF044L02+           TTAAAGAGCTAAAAGACAAAGAAAGAGACGAAGGAGAAGAAGAGTTAGTTCACACCTTTC
                      ____________________________________________________________
consensus             TTAAAGAGCTAAAAGACAAAGAAAGAGACGAAGGAGAAGAAGAGTTAGTTCACACCTTTC