| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF038M20 | Sequence | 525 | 003854 (3) | ref|XP_004237363.1| | 7e-78 | PREDICTED: probable receptor-like serine/threonine-protein kinase At5g57670 [So | 723 | 001168 (2) | ref|XP_011102142.1| | 6e-55 | PREDICTED: probable receptor-like serine/threonine-protein kinase At5g57670 [Se |
| JMFS075B12 | Sequence | 611 | 003854 (3) | ref|XP_004237363.1| | 3e-63 | PREDICTED: probable receptor-like serine/threonine-protein kinase At5g57670 [So | |||||
| JMSF043L07 | Sequence | 770 | 003854 (3) | ref|XP_004237363.1| | 5e-83 | PREDICTED: probable receptor-like serine/threonine-protein kinase At5g57670 [So | 732 | 001168 (2) | ref|XP_011102142.1| | 8e-57 | PREDICTED: probable receptor-like serine/threonine-protein kinase At5g57670 [Se |
This contig is upended
. : . : . : . : . : . :
JMSF043L07+ TAAGCAAACCATTCCTTTGATGAAGTTCAATTTCTTTCGTAGTGACCAGA
____________________________________________________________
consensus TAAGCAAACCATTCCTTTGATGAAGTTCAATTTCTTTCGTAGTGACCAGA
. : . : . : . : . : . :
JMFF038M20+ CTCTCGATGGAAGACCACTTTGCCATTATTAACAGCCAAGACTGAG
JMSF043L07+ GATGGTCTTGATGCCTCTCGATGGAAGACCACTTTGCCATTATTAACAGCCAAGACTGAG
____________________________________________________________
consensus GATGGTCTTGATGCCTCTCGATGGAAGACCACTTTGCCATTATTAACAGCCAAGACTGAG
. : . : . : . : . : . :
JMFS075B12+ TAGCACAGTACTTTGCAACAGAAGCTGATGATCGGATTGTA
JMFF038M20+ CAATCACTTGGCAATTTCTTAGCACAGTACTTTGCAACAGAAGCTGATGATCGGATTGTA
JMSF043L07+ CAATCACTTGGCAATTTCTTAGCACAGTACTTTGCAACAGAAGCTGATGATCGGATTGTA
____________________________________________________________
consensus CAATCACTTGGCAATTTCTTAGCACAGTACTTTGCAACAGAAGCTGATGATCGGATTGTA
. : . : . : . : . : . :
JMFS075B12+ TGATGATTCCGTGCTGTCCCAACAATAAGGTCGTTTGCTAGGTAAGCATTTGCTTCACGG
JMFF038M20+ TGATGATTCCGTGCTGTCCCAACAATAAGGTCGTTTGCTAGGTAAGCATTTGCTTCACGG
JMSF043L07+ TGATGATTCCGTGCTGTCCCAACAATAAGGTCGTTTGCTAGGTAAGCATTTGCTTCACGG
____________________________________________________________
consensus TGATGATTCCGTGCTGTCCCAACAATAAGGTCGTTTGCTAGGTAAGCATTTGCTTCACGG
. : . : . : . : . : . :
JMFS075B12+ ACAAGAATTTTCCGGATTGATGAACCTCTGCATATCTTAAGCTTGAGATCCACCTGTTTG
JMFF038M20+ ACAAGAATTTTCCGGATTGATGAACCTCTGCATATCTTAAGCTTGAGATCCACCTGTTTG
JMSF043L07+ ACAAGAATTTTCCGGATTGATGAACCTCTGCATATCTTAAGCTTGAGATCCACCTGTTTG
____________________________________________________________
consensus ACAAGAATTTTCCGGATTGATGAACCTCTGCATATCTTAAGCTTGAGATCCACCTGTTTG
. : . : . : . : . : . :
JMFS075B12+ AGGTTACAAAAGCCTTCATAAACTGCAAGAATAGAGTCAAATGCTTTCACCAACGATAAC
JMFF038M20+ AGGTTACAAAAGCCTTCATAAACTGCAAGAATAGAGTCAAATGCTTTCACCAACGATAAC
JMSF043L07+ AGGTTACAAAAGCCTTCATAAACTGCAAGAATAGAGTCAAATGCTTTCACCAACGATAAC
____________________________________________________________
consensus AGGTTACAAAAGCCTTCATAAACTGCAAGAATAGAGTCAAATGCTTTCACCAACGATAAC
. : . : . : . : . : . :
JMFS075B12+ AGAGATGATTTGCCCTCCCGGTCCACAATTTCGTTGTTGTTGAGAACGTGAAGAGCAACG
JMFF038M20+ AGAGATGATTTGCCCTCCCGGTCCACAATTTCGTTGTTGTTGAGAACGTGAAGAGCAACG
JMSF043L07+ AGAGATGATTTGCCCTCCCGGTCCACAATTTCGTTGTTGTTGAGAACGTGAAGAGCAACG
____________________________________________________________
consensus AGAGATGATTTGCCCTCCCGGTCCACAATTTCGTTGTTGTTGAGAACGTGAAGAGCAACG
. : . : . : . : . : . :
JMFS075B12+ ACGCGGTCACCAGTTTGCGCAACTTTGACGAGTGCCCAAGTCAGGAGCTCCCTGCTCTGA
JMFF038M20+ ACGCGGTCACCAGTTTGCGCAACTTTGACGAGTGCCCAAGTCAGGAGCTCCCTGCTCTGA
JMSF043L07+ ACGCGGTCACCAGTTTGCGCAACTTTGACGAGTGCCCAAGTCAGGAGCTCCCTGCTCTGA
____________________________________________________________
consensus ACGCGGTCACCAGTTTGCGCAACTTTGACGAGTGCCCAAGTCAGGAGCTCCCTGCTCTGA
. : . : . : . : . : . :
JMFS075B12+ CCATCCAGCTTAACACCCACCACCACGGTGCGACCTCCCTCTTCTCCGGCGGCGAGGATT
JMFF038M20+ CCATCCAGCTTAACACCCACCACCACGGTGCGACCTCCCTCTTCTCCGGCGGCGAGGATT
JMSF043L07+ CCATCCAGCTTAACACCCACCACCACGGTGCGACCTCCCTCTTCTCCGGCGGCGAGGATT
____________________________________________________________
consensus CCATCCAGCTTAACACCCACCACCACGGTGCGACCTCCCTCTTCTCCGGCGGCGAGGATT
. : . : . : . : . : . :
JMFS075B12+ GATTGAAACTGGGTCATTATCCTGCTGGGAATTGAATTTCCGACGACTCTACCTCCACCG
JMFF038M20+ GATTGAAACTGGGTCATTATCCTGCTGGGAATTGAATTTCCGACGACTCTACCTCCACC
JMSF043L07+ GATTGAAACTGGGTCATTATCCTGCTGGGAATTGAATTTCCGACGACTCTACCTCCACCG
____________________________________________________________
consensus GATTGAAACTGGGTCATTATCCTGCTGGGAATTGAATTTCCGACGACTCTACCTCCACCG
. : . : . : . : . : . :
JMFS075B12+ AATGAATTTCATGTGGAAGAAAGGGCAATATAAGGAGGAAGGAGCATTGCATATTGCATT
JMSF043L07+ AATGAATTTCATGTGGAAGAAAGGGCAATATAAGGAGGAAGGAGCATTGCATATTGCATT
____________________________________________________________
consensus AATGAATTTCATGTGGAAGAAAGGGCAATATAAGGAGGAAGGAGCATTGCATATTGCATT
. : . : . : . : . : . :
JMFS075B12+ GAAGGGTATTGGTTTAACCGTCGATTGGTTCGGCGGCTGAAGAGTAGTTTGGTTTTCAAG
JMSF043L07+ GAAGGGTATTGGTTTAACCGTCGATTGGTTCGGCGGCTGAAGAGTAGTTTGGTTTTCAAG
____________________________________________________________
consensus GAAGGGTATTGGTTTAACCGTCGATTGGTTCGGCGGCTGAAGAGTAGTTTGGTTTTCAAG
. : . : . : . : . : . :
JMFS075B12+ ATCACATACCAGAAATTCAGGAAGAAGAAA
JMSF043L07+ ATCACATACCAGAAATTCAGGAAGAAGAAAGTGTGCAGTGTCGTTGCTTGGTATCAATCC
____________________________________________________________
consensus ATCACATACCAGAAATTCAGGAAGAAGAAAGTGTGCAGTGTCGTTGCTTGGTATCAATCC