Contig 003854:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF038M20Sequence525003854 (3)ref|XP_004237363.1|7e-78PREDICTED: probable receptor-like serine/threonine-protein kinase At5g57670 [So723001168 (2)ref|XP_011102142.1|6e-55PREDICTED: probable receptor-like serine/threonine-protein kinase At5g57670 [Se
JMFS075B12Sequence611003854 (3)ref|XP_004237363.1|3e-63PREDICTED: probable receptor-like serine/threonine-protein kinase At5g57670 [So
JMSF043L07Sequence770003854 (3)ref|XP_004237363.1|5e-83PREDICTED: probable receptor-like serine/threonine-protein kinase At5g57670 [So732001168 (2)ref|XP_011102142.1|8e-57PREDICTED: probable receptor-like serine/threonine-protein kinase At5g57670 [Se

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF043L07+ TAAGCAAACCATTCCTTTGATGAAGTTCAATTTCTTTCGTAGTGACCAGA
                      ____________________________________________________________
consensus TAAGCAAACCATTCCTTTGATGAAGTTCAATTTCTTTCGTAGTGACCAGA
 
. : . : . : . : . : . :
JMFF038M20+ CTCTCGATGGAAGACCACTTTGCCATTATTAACAGCCAAGACTGAG
JMSF043L07+ GATGGTCTTGATGCCTCTCGATGGAAGACCACTTTGCCATTATTAACAGCCAAGACTGAG
                      ____________________________________________________________
consensus GATGGTCTTGATGCCTCTCGATGGAAGACCACTTTGCCATTATTAACAGCCAAGACTGAG
 
. : . : . : . : . : . :
JMFS075B12+ TAGCACAGTACTTTGCAACAGAAGCTGATGATCGGATTGTA
JMFF038M20+ CAATCACTTGGCAATTTCTTAGCACAGTACTTTGCAACAGAAGCTGATGATCGGATTGTA
JMSF043L07+ CAATCACTTGGCAATTTCTTAGCACAGTACTTTGCAACAGAAGCTGATGATCGGATTGTA
                      ____________________________________________________________
consensus CAATCACTTGGCAATTTCTTAGCACAGTACTTTGCAACAGAAGCTGATGATCGGATTGTA
 
. : . : . : . : . : . :
JMFS075B12+ TGATGATTCCGTGCTGTCCCAACAATAAGGTCGTTTGCTAGGTAAGCATTTGCTTCACGG
JMFF038M20+ TGATGATTCCGTGCTGTCCCAACAATAAGGTCGTTTGCTAGGTAAGCATTTGCTTCACGG
JMSF043L07+ TGATGATTCCGTGCTGTCCCAACAATAAGGTCGTTTGCTAGGTAAGCATTTGCTTCACGG
                      ____________________________________________________________
consensus TGATGATTCCGTGCTGTCCCAACAATAAGGTCGTTTGCTAGGTAAGCATTTGCTTCACGG
 
. : . : . : . : . : . :
JMFS075B12+ ACAAGAATTTTCCGGATTGATGAACCTCTGCATATCTTAAGCTTGAGATCCACCTGTTTG
JMFF038M20+ ACAAGAATTTTCCGGATTGATGAACCTCTGCATATCTTAAGCTTGAGATCCACCTGTTTG
JMSF043L07+ ACAAGAATTTTCCGGATTGATGAACCTCTGCATATCTTAAGCTTGAGATCCACCTGTTTG
                      ____________________________________________________________
consensus ACAAGAATTTTCCGGATTGATGAACCTCTGCATATCTTAAGCTTGAGATCCACCTGTTTG
 
. : . : . : . : . : . :
JMFS075B12+ AGGTTACAAAAGCCTTCATAAACTGCAAGAATAGAGTCAAATGCTTTCACCAACGATAAC
JMFF038M20+ AGGTTACAAAAGCCTTCATAAACTGCAAGAATAGAGTCAAATGCTTTCACCAACGATAAC
JMSF043L07+ AGGTTACAAAAGCCTTCATAAACTGCAAGAATAGAGTCAAATGCTTTCACCAACGATAAC
                      ____________________________________________________________
consensus AGGTTACAAAAGCCTTCATAAACTGCAAGAATAGAGTCAAATGCTTTCACCAACGATAAC
 
. : . : . : . : . : . :
JMFS075B12+ AGAGATGATTTGCCCTCCCGGTCCACAATTTCGTTGTTGTTGAGAACGTGAAGAGCAACG
JMFF038M20+ AGAGATGATTTGCCCTCCCGGTCCACAATTTCGTTGTTGTTGAGAACGTGAAGAGCAACG
JMSF043L07+ AGAGATGATTTGCCCTCCCGGTCCACAATTTCGTTGTTGTTGAGAACGTGAAGAGCAACG
                      ____________________________________________________________
consensus AGAGATGATTTGCCCTCCCGGTCCACAATTTCGTTGTTGTTGAGAACGTGAAGAGCAACG
 
. : . : . : . : . : . :
JMFS075B12+ ACGCGGTCACCAGTTTGCGCAACTTTGACGAGTGCCCAAGTCAGGAGCTCCCTGCTCTGA
JMFF038M20+ ACGCGGTCACCAGTTTGCGCAACTTTGACGAGTGCCCAAGTCAGGAGCTCCCTGCTCTGA
JMSF043L07+ ACGCGGTCACCAGTTTGCGCAACTTTGACGAGTGCCCAAGTCAGGAGCTCCCTGCTCTGA
                      ____________________________________________________________
consensus ACGCGGTCACCAGTTTGCGCAACTTTGACGAGTGCCCAAGTCAGGAGCTCCCTGCTCTGA
 
. : . : . : . : . : . :
JMFS075B12+ CCATCCAGCTTAACACCCACCACCACGGTGCGACCTCCCTCTTCTCCGGCGGCGAGGATT
JMFF038M20+ CCATCCAGCTTAACACCCACCACCACGGTGCGACCTCCCTCTTCTCCGGCGGCGAGGATT
JMSF043L07+ CCATCCAGCTTAACACCCACCACCACGGTGCGACCTCCCTCTTCTCCGGCGGCGAGGATT
                      ____________________________________________________________
consensus CCATCCAGCTTAACACCCACCACCACGGTGCGACCTCCCTCTTCTCCGGCGGCGAGGATT
 
. : . : . : . : . : . :
JMFS075B12+ GATTGAAACTGGGTCATTATCCTGCTGGGAATTGAATTTCCGACGACTCTACCTCCACCG
JMFF038M20+ GATTGAAACTGGGTCATTATCCTGCTGGGAATTGAATTTCCGACGACTCTACCTCCACC
JMSF043L07+ GATTGAAACTGGGTCATTATCCTGCTGGGAATTGAATTTCCGACGACTCTACCTCCACCG
                      ____________________________________________________________
consensus GATTGAAACTGGGTCATTATCCTGCTGGGAATTGAATTTCCGACGACTCTACCTCCACCG
 
. : . : . : . : . : . :
JMFS075B12+ AATGAATTTCATGTGGAAGAAAGGGCAATATAAGGAGGAAGGAGCATTGCATATTGCATT
JMSF043L07+ AATGAATTTCATGTGGAAGAAAGGGCAATATAAGGAGGAAGGAGCATTGCATATTGCATT
                      ____________________________________________________________
consensus AATGAATTTCATGTGGAAGAAAGGGCAATATAAGGAGGAAGGAGCATTGCATATTGCATT
 
. : . : . : . : . : . :
JMFS075B12+ GAAGGGTATTGGTTTAACCGTCGATTGGTTCGGCGGCTGAAGAGTAGTTTGGTTTTCAAG
JMSF043L07+ GAAGGGTATTGGTTTAACCGTCGATTGGTTCGGCGGCTGAAGAGTAGTTTGGTTTTCAAG
                      ____________________________________________________________
consensus GAAGGGTATTGGTTTAACCGTCGATTGGTTCGGCGGCTGAAGAGTAGTTTGGTTTTCAAG
 
. : . : . : . : . : . :
JMFS075B12+ ATCACATACCAGAAATTCAGGAAGAAGAAA
JMSF043L07+ ATCACATACCAGAAATTCAGGAAGAAGAAAGTGTGCAGTGTCGTTGCTTGGTATCAATCC
                      ____________________________________________________________
consensus ATCACATACCAGAAATTCAGGAAGAAGAAAGTGTGCAGTGTCGTTGCTTGGTATCAATCC