Contig 003851:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF020D12Sequence552003851 (5)ref|XP_004232452.1|96.3PREDICTED: uncharacterized protein LOC101247385 [Solanum lycopersicum]673003851 (5)ref|XP_004232452.1|96.3PREDICTED: uncharacterized protein LOC101247385 [Solanum lycopersicum]
JMFN019L09Sequence552003851 (5)ref|XP_004232452.1|100PREDICTED: uncharacterized protein LOC101247385 [Solanum lycopersicum]
JMSF043I12Sequence624003851 (5)ref|XP_004232452.1|98.6PREDICTED: uncharacterized protein LOC101247385 [Solanum lycopersicum]574003851 (5)ref|XP_004232452.1|98.6PREDICTED: uncharacterized protein LOC101247385 [Solanum lycopersicum]

Alignment

This contig is upended


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rJMFF020D12-                                                         TGTTGTTAATTGA
                      ____________________________________________________________
consensus                                                            TGTTGTTAATTGA
 
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rJMFF020D12-          AATTGAAATGCATAGAATACAAATTGCAACTAAATCCCAGGAGCTTGAAAAAGAGATTAT
JMFN019L09+                                                         GAAAAAGAGATTAT
JMSF043I12+                                                       TTGAAAAAGAGATTAT
                      ____________________________________________________________
consensus             AATTGAAATGCATAGAATACAAATTGCAACTAAATCCCAGGAGCTTGAAAAAGAGATTAT
 
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rJMFF020D12-          AATATTCTTTCAGGAAGAGAAATCAAACTACGCAACAATCTAATGAAACCTATGAGAAAT
rJMSF043I12-                                    ACTACGCAACAATCTAATGAAACCTATGAGAAAT
JMFF020D12+                                                           CCTATGAGAAAT
JMFN019L09+           AATATTCTTTCAGGAAGAGAAATCAAACTACGCAACAATCTAATGAAACCTATGAGAAAT
JMSF043I12+           AATATTCTTTCAGGAAGAGAAATCAAACTACGCAACAATCTAATGAAACCTATGAGAAAT
                      ____________________________________________________________
consensus             AATATTCTTTCAGGAAGAGAAATCAAACTACGCAACAATCTAATGAAACCTATGAGAAAT
 
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rJMFF020D12-          GCCCAGAAGCTGGGAAACAGATGTGTTTTCAAGAATAATAAATTAGTTGTCTAAATAACA
rJMSF043I12-          GCCCAGAAGCTGGGAAACAGATGTGTTTTCAAGAATAATAAATTAGTTGTCTAAATAACA
JMFF020D12+           GCCCAGAAGCTGGGAAACAGATGTGTTTTCAAGAATAATAAATTAGTTGTCTAAATAACA
JMFN019L09+           GCCCAGAAGCTGGGAAACAGATGTGTTTTCAAGAATAATAAATTAGTTGTCTAAATAACA
JMSF043I12+           GCCCAGAAGCTGGGAAACAGATGTGTTTTCAAGAATAATAAATTAGTTGTCTAAATAACA
                      ____________________________________________________________
consensus             GCCCAGAAGCTGGGAAACAGATGTGTTTTCAAGAATAATAAATTAGTTGTCTAAATAACA
 
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rJMFF020D12-          AATACTTGAAGAAGGTTTAAGAATCTGGAGTGGTCTTGTAAAGCTTGTTGTACTCCTCCA
rJMSF043I12-          AATACTTGAAGAAGGTTTAAGAATCTGGAGTGGTCTTGTAAAGCTTGTTGTACTCCTCCA
JMFF020D12+           AATACTTGAAGAAGGTTTAAGAATCTGGAGTGGTCTTGTAAAGCTTGTTGTACTCCTCCA
JMFN019L09+           AATACTTGAAGAAGGTTTAAGAATCTGGAGTGGTCTTGTAAAGCTTGTTGTACTCCTCCA
JMSF043I12+           AATACTTGAAGAAGGTTTAAGAATCTGGAGTGGTCTTGTAAAGCTTGTTGTACTCCTCCA
                      ____________________________________________________________
consensus             AATACTTGAAGAAGGTTTAAGAATCTGGAGTGGTCTTGTAAAGCTTGTTGTACTCCTCCA
 
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rJMFF020D12-          GCTCGTCGTAGTATAGATCCCAAACGCACCTAACGCATCCGCTGCCGCAGCAATCGTCCG
rJMSF043I12-          GCTCGTCGTAGTATAGATCCCAAACGCACCTAACGCATCCGCTGCCGCAGCAATCGTCCG
JMFF020D12+           GCTCGTCGTAGTATAGATCCCAAACGCACCTAACGCATCCGCTGCCGCAGCAATCGTCCG
JMFN019L09+           GCTCGTCGTAGTATAGATCCCAAACGCACCTAACGCATCCGCTGCCGCAGCAATCGTCCG
JMSF043I12+           GCTCGTCGTAGTATAGATCCCAAACGCACCTAACGCATCCGCTGCCGCAGCAATCGTCCG
                      ____________________________________________________________
consensus             GCTCGTCGTAGTATAGATCCCAAACGCACCTAACGCATCCGCTGCCGCAGCAATCGTCCG
 
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rJMFF020D12-          GCAACGGCTTCTCTGGCGGCGGAGGAATGGATTCCATTGGCTTTTCCGGTTTCTTCTCAG
rJMSF043I12-          GCAACGGCTTCTCTGGCGGCGGAGGAATGGATTCCATTGGCTTTTCCGGTTTCTTCTCAG
JMFF020D12+           GCAACGGCTTCTCTGGCGGCGGAGGAATGGATTCCATTGGCTTTTCCGGTTTCTTCTCAG
JMFN019L09+           GCAACGGCTTCTATGGCGGCGGAGGAATGGATTCCATTGGCTTTTCCGGTTTCTTCTCAG
JMSF043I12+           GCAACGGCTTCTCTGGCGGCGGAGGAATGGATTCCATTGGCTTTTCCGGTTTCTTCTCAG
                      ____________________________________________________________
consensus             GCAACGGCTTCTCTGGCGGCGGAGGAATGGATTCCATTGGCTTTTCCGGTTTCTTCTCAG
 
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rJMFF020D12-          CCTCCTCTTTCTTATGATTGGTTGCCGAATCTGCGGTGATTTTGCTTTTCGCTTCGTCCG
rJMSF043I12-          CCTCCTCTTTCTTATGATTGGTTGCAGAATCTGCGGTGATTTTGCTTTTCGCTTCGTCCG
JMFF020D12+           CCTCCTCTTTCTTATGATTGGTTGCCGAATCTGCGGTGATTTTGCTTTTCGCTTCGTCCG
JMFN019L09+           CCTCCTCTTTCTTATGATTGGTTGCCGAATCTGCGGTGATTTTGCTTTTCGCTTCGTCCG
JMSF043I12+           CCTCCTCTTTCTTATGATTGGTTGCAGAATCTGCGGTGATTTTGCTTTTCGCTTCGTCCG
                      ____________________________________________________________
consensus             CCTCCTCTTTCTTATGATTGGTTGCCGAATCTGCGGTGATTTTGCTTTTCGCTTCGTCCG
 
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rJMFF020D12-          CCATCGCGTTATTCAAGGCTACAACGCTTTTGTTGCAGAATAGGTTTGGATGATGGAATC
rJMSF043I12-          CCATCGCGTTCTTCAAGGCTACAACGCTTTTGTTGCAGAATAGGTTTGGATGATGGAATC
JMFF020D12+           CCATCGCGTTATTCAAGGCTACAACGCTTTTGTTGCAGAATAGGTTTGGATGATGGAATC
JMFN019L09+           CCATCGCGTTCTTCAAGGCTACAACGCTTTTGTTGCAGAATAGGTTTGGATGATGGAATC
JMSF043I12+           CCATCGCGTTCTTCAAGGCTACAACGCTTTTGTTGCAGAATAGGTTTGGATGATGGAATC
                      ____________________________________________________________
consensus             CCATCGCGTTCTTCAAGGCTACAACGCTTTTGTTGCAGAATAGGTTTGGATGATGGAATC
 
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rJMFF020D12-          TGATGCGTCGAAGAGTCAGATCTCTTATAGGCATGGCCGGTACAGCTGCGCCTCGAACAT
rJMSF043I12-          TGATGCGTCGAAGAGTCAGATCTCTTATAGGCATGGCCGGTACAGCTGCGCCTCGAACAT
JMFF020D12+           TGATGCGTCGAAGAGTCAGATCTCTTATAGGCATGGCCGGTACAGCTGCGCCTCGAACAT
JMFN019L09+           TGATGCGTCGAAGAGTCAGATCTCTTATAGGCATGGCCGGTACAGCTGCGCCTCGAACAT
JMSF043I12+           TGATGCGTCGAAGAGTCAGATCTCTTATAGGCATGGCCGGTACAGCTGCGCCTCGAACAT
                      ____________________________________________________________
consensus             TGATGCGTCGAAGAGTCAGATCTCTTATAGGCATGGCCGGTACAGCTGCGCCTCGAACAT
 
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rJMFF020D12-          GATGTGGCACTTGTCGGCGGCGATTGGTCGTGGGTGGCTGCGGTTGGTGCTGCGGCGTTA
rJMSF043I12-          GATGTGGCACTTGTCGGCGGCGATTGGTCGTGGGTGGCTGCGGTTGGTGCTGCGGCGTTA
JMFF020D12+           GATGTGGCACTTGTCGGCGGCGATTGGTCGTGGGTGGCTGCGGTTGGTGCTGCGGCGTTA
JMFN019L09+           GATGTGGCACTTGTCGGCGGCGATTGGTCGTGGGTGGCTGCGGTTGGTGCTGCGGCGT  
JMSF043I12+           GATGTGGCACTTGTCGGCGGCGATTGGTCGTGGGTGGCTGCGGTTGGTGCTGCGGCGTTA
                      ____________________________________________________________
consensus             GATGTGGCACTTGTCGGCGGCGATTGGTCGTGGGTGGCTGCGGTTGGTGCTGCGGCGTTA
 
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rJMFF020D12-          CGGGATGAAGAAATTGGAGATGCAGATGATGCACGCCCAATTCCATATAACCAATCCTCC
rJMSF043I12-          CGGGATGAAGAAATTGGAGATGCAGATGATGCACGCCCAATTCCATATAACCAATCCTCC
JMFF020D12+           CGGGATGAAGAAATTGGAGATGCAGATGATGCACGCCCAATTCCATATAACCAATCCTCC
JMSF043I12+           CGGGATGAAGAAATTGGAGATGCAGATGATGCACGCCCAATTCCATATAACCAATCCTCC
                      ____________________________________________________________
consensus             CGGGATGAAGAAATTGGAGATGCAGATGATGCACGCCCAATTCCATATAACCAATCCTCC