Contig 003846:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF024C11Sequence377003846 (2)726001459 (3)ref|XP_006339953.1|248PREDICTED: uncharacterized protein LOC102588626 [Solanum tuberosum]
JMSF042P14Sequence437003846 (2)674001459 (3)ref|XP_010090004.1|7e-69hypothetical protein L484_027234 [Morus notabilis] gb|EXB38801.1| hypothetical p

Alignment

This contig is upended


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JMSF042P14+                                                      TNTNNNTCANNATCNNT
                      ____________________________________________________________
consensus                                                        TNTNNNTCANNATCNNT
 
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JMSF024C11+                                                     CTCTTCCTCCTCCTCTTC
JMSF042P14+           NTCATCTCCTNTCCCTNNTAAGCCACCAAAACCCTCATCATCCTCTTCCTCCTCCTCTTC
                      ____________________________________________________________
consensus             NTCATCTCCTNTCCCTNNTAAGCCACCAAAACCCTCATCATCCTCTTCCTCCTCCTCTTC
 
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JMSF024C11+           TATCCCTCCAAACCCTCTGAATCCACCAAAGCCTTCCACCTCCTCCTCATCTTTGTCGCC
JMSF042P14+           TATCCCTCCAAACCCTCTGAATCCACCAAAGCCTTCCACCTCCTCCTCATCTTTGTCGCC
                      ____________________________________________________________
consensus             TATCCCTCCAAACCCTCTGAATCCACCAAAGCCTTCCACCTCCTCCTCATCTTTGTCGCC
 
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JMSF024C11+           ATAGATGTTGCTTTCTTCCAATCGGGTTAGGGAATTCTTGGTTTCTGATCTCCGGGTGTT
JMSF042P14+           ATAGATGTTGCTTTCTTCCAATCGGGTTAGGGAATTCTTGGTTTCTGATCTCCGGGTGTT
                      ____________________________________________________________
consensus             ATAGATGTTGCTTTCTTCCAATCGGGTTAGGGAATTCTTGGTTTCTGATCTCCGGGTGTT
 
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JMSF024C11+           GCTTGCGCTGGTAATATGAGAACATGGGTTTAGTTGCAAATGAGTTCGAGTTGGAAATGA
JMSF042P14+           GCTTGCGCTGGTAATATGAGAACATGGGTTTAGTTGCAAATGAGTTCGAGTTGGAAATGA
                      ____________________________________________________________
consensus             GCTTGCGCTGGTAATATGAGAACATGGGTTTAGTTGCAAATGAGTTCGAGTTGGAAATGA
 
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JMSF024C11+           AAAGCGTAGAAATGGTTGGGCGCCATAGGGTTGAGAAAAATATGAAGTAGTGGGTGGTAG
JMSF042P14+           AAAGCGTAGAAATGGTTGGGCGCCATAGGGTTGAGAAAAATATGAAGTAGTGGGTGGTAG
                      ____________________________________________________________
consensus             AAAGCGTAGAAATGGTTGGGCGCCATAGGGTTGAGAAAAATATGAAGTAGTGGGTGGTAG
 
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JMSF024C11+           TTGAAAATGAGAAGTGGAGGATTGAAGAAGATGAAGGGTAAACATAGGTGGCGGTCGGTA
JMSF042P14+           TTGAAAATGAGAAGTGGAGGATTGAAGAAGATGAAGGGTAAACATAGGTGGCGGTCGGTA
                      ____________________________________________________________
consensus             TTGAAAATGAGAAGTGGAGGATTGAAGAAGATGAAGGGTAAACATAGGTGGCGGTCGGTA
 
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JMSF024C11+           GTTGATAAGCAGGCGTGGGTTGGCTGCCGTTCAG-GGGGAAGAAGAGAAGACTCACGTCC
JMSF042P14+           GTTGATAAGCAGGCGTGGGTTGGCTGCCGTTCAGCGGGGAAGAAGAGAAGACTCACGTCC
                      ____________________________________________________________
consensus             GTTGATAAGCAGGCGTGGGTTGGCTGCCGTTCAGCGGGGAAGAAGAGAAGACTCACGTCC