Contig 003840:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS017E08Sequence641003840 (4)ref|XP_009764792.1|7e-71PREDICTED: uncharacterized protein LOC104216452 isoform X2 [Nicotiana sylvestri
JMFS099G08Sequence619003840 (4)ref|XP_009764792.1|3e-96PREDICTED: uncharacterized protein LOC104216452 isoform X2 [Nicotiana sylvestri
JMFS137E06Sequence625003840 (4)ref|XP_009764791.1|3e-53PREDICTED: uncharacterized protein LOC104216452 isoform X1 [Nicotiana sylvestri
JMSF042J12Sequence828003840 (4)ref|XP_009764792.1|3e-94PREDICTED: uncharacterized protein LOC104216452 isoform X2 [Nicotiana sylvestri710018307gb|ACU20921.1|3e-113unknown [Glycine max]

Alignment

This contig is upended


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JMFS099G08+                     TCCAGGATTAGGCAAAGGTACATTGGAGACTACATATGCGATGACATCCC
JMSF042J12+                       CAGGATTAGGCAAAGGTACATTGGAGACTACATATGCGATGACATCCC
                      ____________________________________________________________
consensus                       TCCAGGATTAGGCAAAGGTACATTGGAGACTACATATGCGATGACATCCC
 
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JMFS099G08+           ACAATGGCTTGCTACTTCCGGAAGAGGAAAAGCAAAGCGTAAAAATTTCCTCTAGAGCTT
JMSF042J12+           ACAATGGCTTGCTACTTCCGGAAGAGGAAAAGCAAAGCGTAAAAATTTCCTCTAGAGCTT
                      ____________________________________________________________
consensus             ACAATGGCTTGCTACTTCCGGAAGAGGAAAAGCAAAGCGTAAAAATTTCCTCTAGAGCTT
 
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JMFS099G08+           CTCGTAGAATTCTAAAACTAGGTGAACGTGAAACAAGACAGATGCATTTATCAGCAAATG
JMFS017E08+            TCGTAGAATTCTAAAACTAGGTGAACGTGAAACAAGACAGATGCATTTATCAGCAAATG
JMSF042J12+           CTCGTAGAATTCTAAAACTAGGTGAACGTGAAACAAGACAGATGCATTTATCAGCAAATG
                      ____________________________________________________________
consensus             CTCGTAGAATTCTAAAACTAGGTGAACGTGAAACAAGACAGATGCATTTATCAGCAAATG
 
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JMFS099G08+           AATTTGCAGGAATGCGATAAGCTTCAGCAATATCCTCACAAACAGGATCTCGGAACGCAA
JMFS017E08+           AATTTGCAGGAATGCGATAAGCTTCAGCAATATCCTCACAAACAGGATCTCGGAACGCAA
JMFS137E06+                          GATAAGCTTCAGCAATATCCTCACAAACAGGATCTCGGAACGCAA
JMSF042J12+           AATTTGCAGGAATGCGATAAGCTTCAGCAATATCCTCACAAACAGGATCTCGGAACGCAA
                      ____________________________________________________________
consensus             AATTTGCAGGAATGCGATAAGCTTCAGCAATATCCTCACAAACAGGATCTCGGAACGCAA
 
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JMFS099G08+           TGCAACTAACATAAATCTTTGACCCATCACCCTCAGTTAAAACAATGGGATAACTCTTTG
JMFS017E08+           TGCAACTAACATAAATCTTTGACCCATCACCCTCAGTTAAAACAATGGGATAACTCTTTG
JMFS137E06+           TGCAACTAACATAAATCTTTGACCCATCACCCTCAGTTAAAACAATGGGATAACTCTTTG
JMSF042J12+           TGCAACTAACATAAATCTTTGACCCATCACCCTCAGTTAAAACAATGGGATAACTCTTTG
                      ____________________________________________________________
consensus             TGCAACTAACATAAATCTTTGACCCATCACCCTCAGTTAAAACAATGGGATAACTCTTTG
 
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JMFS099G08+           GAAAAGTTGATGGATTATTAGAATCAAACCCAGATGGATAGAATTCCACACCAGCAGGCA
JMFS017E08+           GAAAAGTTGATGGATTATTAGAATCAAACCCAGATGGATAGAATTCCACACCAGCAGGCA
JMFS137E06+           GAAAAGTTGATGGATTATTAGAATCAAACCCAGATGGATAGAATTCCACACCAGCAGGCA
JMSF042J12+           GAAAAGTTGATGGATTATTAGAATCAAACCCAGATGGATAGAATTCCACACCAGCAGGCA
                      ____________________________________________________________
consensus             GAAAAGTTGATGGATTATTAGAATCAAACCCAGATGGATAGAATTCCACACCAGCAGGCA
 
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JMFS099G08+           AAACACAAGTAGAAAGCTGAGGAGGAGGAGGAGGATAGAGAGAGTGATTAAGAGGCGGGT
JMFS017E08+           AAACACAAGTAGAAAGCTGAGGAGGAGGAGGAGGATAGAGAGAGTGATTAAGAGGCGGGT
JMFS137E06+           AAACACAAGTAGAAAGCTGAGGAGGAGGAGGAGGATAGAGAGAGTGATTAAGAGGCGGGT
JMSF042J12+           AAACACAAGTAGAAAGCTGAGGAGGAGGAGGAGGATAGAGAGAGTGATTAAGAGGCGGGT
                      ____________________________________________________________
consensus             AAACACAAGTAGAAAGCTGAGGAGGAGGAGGAGGATAGAGAGAGTGATTAAGAGGCGGGT
 
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JMFS099G08+           ACTGATCCAGAAGAGAAGCCAAGTACATGATCCCTGTCCCATTGTAACCTCTTTGACCTT
JMFS017E08+           ACTGATCCAGAAGAGAAGCCAAGTACATGATCCCTGTCCCATTGTAACCTCTTTGACCTT
JMFS137E06+           ACTGATCCAGAAGAGAAGCCAAGTACATGATCCCTGTCCCATTGTAACCTCTTTGACCTT
JMSF042J12+           ACTGATCCAGAAGAGAAGCCAAGTACATGATCCCTGTCCCATTGTAACCTCTTTGACCTT
                      ____________________________________________________________
consensus             ACTGATCCAGAAGAGAAGCCAAGTACATGATCCCTGTCCCATTGTAACCTCTTTGACCTT
 
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JMFS099G08+           CTAGCGTCCGAATCTCCGGCCCGATTCCGCAAACCACGAAATACTCGAAGATCCCAGCCA
JMFS017E08+           CTAGCGTCCGAATCTCCGGCCCGATTCCGCAAACCACGAAATACTCGAAGATCCCAGCCA
JMFS137E06+           CTAGCGTCCGAATCTCCGGCCCGATTCCGCAAACCACGAAATACTCGAAGATCCCAGCCA
JMSF042J12+           CTAGCGTCCGAATCTCCGGCCCGATTCCGCAAACCACGAAATACTCGAAGATCCCAGCCA
                      ____________________________________________________________
consensus             CTAGCGTCCGAATCTCCGGCCCGATTCCGCAAACCACGAAATACTCGAAGATCCCAGCCA
 
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JMFS099G08+           TGGCTCACCAAAAGCCAAACCCTCTCAGGTCAGTTACAAGAATGGAAAGACACAACGGCG
JMFS017E08+           TGGCTCACCAAAAGCCAAACCCTCTCAGGTCAGTTACAAGAATGGAAAGACACAACGGCG
JMFS137E06+           TGGCTCACCAAAAGCCAAACCCTCTCAGGTCAGTTACAAGAATGGAAAGACACAACGGCG
JMSF042J12+           TGGCTCACCAAAAGCCAAACCCTCTCAGGTCAGTTACAAGAATGGAAAGACACAACGGCG
                      ____________________________________________________________
consensus             TGGCTCACCAAAAGCCAAACCCTCTCAGGTCAGTTACAAGAATGGAAAGACACAACGGCG
 
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JMFS099G08+           AATTTGCTTCGGATCCAATGAGCTGAGAA                               
JMFS017E08+           AATTTGCTTCGGATCCAATGAGCTGAGAACTCTCTCTCTAGCTGCAAAACCGATGAACGA
JMFS137E06+           AATTTGCTTCGGATCCAATGAGCTGAGAACTCTCTCTCTAGCTGCAAAACCGATGAACGA
JMSF042J12+           AATTTGCTTCGGATCCAATGAGCTGAGAACTCTCTCTCTAGCTGCAAAACCGATGAACGA
                      ____________________________________________________________
consensus             AATTTGCTTCGGATCCAATGAGCTGAGAACTCTCTCTCTAGCTGCAAAACCGATGAACGA
 
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JMFS017E08+           TTAAATTCGAAACGAGTCGTGAGCTTAGCTCGCATCGGGTCTAAGATCCATTCAATGGCG
JMFS137E06+           TTAAATTCGAAACGAGTCGTGAGCTTAGCTCGCATCGGGTCTAAGATCCATTCAATGGCG
JMSF042J12+           TTAAATTCGAAACGAGTCGTGAGCTTAGCTCGCATCGGGTCTAAGATCCATTCAATGGCG
                      ____________________________________________________________
consensus             TTAAATTCGAAACGAGTCGTGAGCTTAGCTCGCATCGGGTCTAAGATCCATTCAATGGCG
 
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JMFS017E08+           AAATGGGAACACGGCGAGTAGTTGACTGTTTCAGTAGATTTC                  
JMFS137E06+           AAATGGGAACACGGCGAGTAGTTGACTGTTTCAGTAGATTTCTTATACCGGGAAGCTCCT
JMSF042J12+           AAATGGGAACACGGCGAGTAGTTGACTGTTTCAGTAGATTTCTTATACCGGGAAGCTCCT
                      ____________________________________________________________
consensus             AAATGGGAACACGGCGAGTAGTTGACTGTTTCAGTAGATTTCTTATACCGGGAAGCTCCT
 
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JMFS137E06+           TCTCCTCACCTCTTCATAGCTGCTAATGAGGTTAACTCTT                    
JMSF042J12+           TCTCCTCACCTCTTCATAGCTGCTAATGAGGTTAACTCTTGAATGGTTGGAGTAAACATA
                      ____________________________________________________________
consensus             TCTCCTCACCTCTTCATAGCTGCTAATGAGGTTAACTCTTGAATGGTTGGAGTAAACATA