| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFN012K17 | Sequence | 627 | 003836 (7) | ref|XP_004244024.1| | 9e-110 | PREDICTED: protein transport protein SFT2 [Solanum lycopersicum] | |||||
| JMSF012I13 | Sequence | 561 | 003836 (7) | ref|XP_004244024.1| | 2e-60 | PREDICTED: protein transport protein SFT2 [Solanum lycopersicum] | 779 | 003836 (7) | ref|XP_004244024.1| | 2e-110 | PREDICTED: protein transport protein SFT2 [Solanum lycopersicum] |
| JMSF031G02 | Sequence | 667 | 003836 (7) | ref|XP_004244024.1| | 2e-82 | PREDICTED: protein transport protein SFT2 [Solanum lycopersicum] | 722 | 003836 (7) | ref|XP_004244024.1| | 3e-112 | PREDICTED: protein transport protein SFT2 [Solanum lycopersicum] |
| JMSF042B06 | Sequence | 816 | 003836 (7) | ref|XP_004244024.1| | 4e-112 | PREDICTED: protein transport protein SFT2 [Solanum lycopersicum] | 677 | 003836 (7) | ref|XP_004244024.1| | 1e-105 | PREDICTED: protein transport protein SFT2 [Solanum lycopersicum] |
This contig is upended
. : . : . : . : . : . :
rJMSF042B06- ACATAATTCTGGGAAA
rJMSF012I13- AAACAGAATATACAACAAGGTGACACATAATTCTGGGAAA
____________________________________________________________
consensus AAACAGAATATACAACAAGGTGACACATAATTCTGGGAAA
. : . : . : . : . : . :
rJMSF031G02- AGTTGAGCAACAGTCAGCCTACCAACAAAAAGATATGCACCC
rJMSF042B06- AAAATCGGATGCTTACAGAGTTGAGCAACAGTCAGCCTACCAACAAAAAGATATGCACCC
rJMSF012I13- AAAATCGGATGCTTACAGAGTTGAGCAACAGTCAGCCTACCAACAAAAAGATATGCACCC
____________________________________________________________
consensus AAAATCGGATGCTTACAGAGTTGAGCAACAGTCAGCCTACCAACAAAAAGATATGCACCC
. : . : . : . : . : . :
rJMSF031G02- TAGACCAGTTACAGACAGGCTTCTTTTAAAACTTGATTAAAAAAGATCTCACAGAAACAT
rJMSF042B06- TAGACCAGTTACAGACAGGCTTCTTTTAAAACTTGATTAAAAAAGATCTCACAGAAACAT
rJMSF012I13- TAGACCAGTTACAGACAGGCTTCTTTTAAAACTTGATTAAAAAAGATCTCACAGAAACAT
____________________________________________________________
consensus TAGACCAGTTACAGACAGGCTTCTTTTAAAACTTGATTAAAAAAGATCTCACAGAAACAT
. : . : . : . : . : . :
rJMSF031G02- TTTTGCTAATGTCACCTTCCAAAGCATTTCAATACTGAAGAAACCATAGATGATGATAGA
rJMSF042B06- TTTTGCTAATGTCACCTTCCAAAGCATTTCAATACTGAAGAAACCATAGATGATGATAGA
rJMSF012I13- TTTTGCTAATGTCACCTTCCAAAGCATTTCAATACTGAAGAAACCATAGATGATGATAGA
JMFN012K17+ CCATAGATGATGATAGA
JMSF042B06+ CATTTCAATACTGAAGAANCCATAGATGATGATAGA
____________________________________________________________
consensus TTTTGCTAATGTCACCTTCCAAAGCATTTCAATACTGAAGAAACCATAGATGATGATAGA
. : . : . : . : . : . :
rJMSF031G02- AACTTAAGTCCAGCAGATCCACCAGGAAAATATGAAACTGCATAGTACAGCAATGCCATA
rJMSF042B06- AACTTAAGTCCAGCAGATCCACCAGGAAAATATGAAACTGCATAGTACAGCAATGCCATA
rJMSF012I13- AACTTAAGTCCAGCAGATCCACCAGGAAAATATGAAACTGCATAGTACAGCAATGCCATA
JMFN012K17+ AACTTAAGTCCAGCAGATCCACCAGGAAAATATGAAACTGCATAGTACAGCAATGCCATA
JMSF042B06+ AACTTAAGTCCAGCAGATCCACCAGGAAAATATGAAACTGCATAGTACAGCAATGCCATA
____________________________________________________________
consensus AACTTAAGTCCAGCAGATCCACCAGGAAAATATGAAACTGCATAGTACAGCAATGCCATA
. : . : . : . : . : . :
rJMSF031G02- ACCTGAATCACAGAGAAGAGAACAGAAAGGATATAGCTATGGAGCCCCATAGACACATAA
rJMSF042B06- ACCTGAATCACAGAGAAGAGAACAGAAAGGATATAGCTATGGAGCCCCATAGACACATAA
rJMSF012I13- ACCTGAATCACAGAGAAGAGAACAGAAAGGATATAGCTATGGAGCCCCATAGACACATAA
JMSF031G02+ CCATAGACACATAA
JMFN012K17+ ACCTGAATCACAGAGAAGAGAACAGAAAGGATATAGCTATGGAGCCCCATAGACACATAA
JMSF042B06+ ACCTGAATCACAGAGAAGAGAACAGAAAGGATATAGCTATGGAGCCCCATAGACACATAA
____________________________________________________________
consensus ACCTGAATCACAGAGAAGAGAACAGAAAGGATATAGCTATGGAGCCCCATAGACACATAA
. : . : . : . : . : . :
rJMSF031G02- AGAGTGCCTATCATGCTGCCTAAAAACCCCAGTGTAAAAGGAAGTCTCTCCTTTGATGAC
rJMSF042B06- AGAGTGCCTATCATGCTGCCTAAAAACCCCAGTGTAAAAGGAAGTCTCTCCTTTGATGAC
rJMSF012I13- AGAGTGCCTATCATGCTGCCTAAAAACCCCAGTGTAAAAGGAAGTCTCTCCTTTGATGAC
JMSF031G02+ AGAGTGCCTATCATGCTGCCTAAAAACCCCAGTGTAAAAGGAAGTCTCTCCTTTGATGAC
JMFN012K17+ AGAGTGCCTATCATGCTGCCTAAAAACCCCAGTGTAAAAGGAAGTCTCTCCTTTGATGAC
JMSF042B06+ AGAGTGCCTATCATGCTGCCTAAAAACCCCAGTGTAAAAGGAAGTCTCTCCTTTGATGAC
____________________________________________________________
consensus AGAGTGCCTATCATGCTGCCTAAAAACCCCAGTGTAAAAGGAAGTCTCTCCTTTGATGAC
. : . : . : . : . : . :
rJMSF031G02- ATGTGGGCAAACTGATTCTTTGTACCTCTAAGGGCAAAGAATGACCCGATGATGAAACAA
rJMSF042B06- ATGTGGGCAAACTGATTCTTTGTACCTCTAAGGGCAAAGAATGACCCGATGATGAAACAA
rJMSF012I13- ATGTGGGCAAACTGATTCTTTGTACCTCTAAGGGCAAAGAATGACCCGATGATGAAACAA
JMSF012I13+ CTAAGGGCAAAGAATGACCCGATGATGAAACAA
JMSF031G02+ ATGTGGGCAAACTGATTCTTTGTACCTCTAAGGGCAAAGAATGACCCGATGATGAAACAA
JMFN012K17+ ATGTGGGCAAACTGATTCTTTGTACCTCTAAGGGCAAAGAATGACCCGATGATGAAACAA
JMSF042B06+ ATGTGGGCAAACTGATTCTTTGTACCTCTAAGGGCAAAGAATGACCCGATGATGAAACAA
____________________________________________________________
consensus ATGTGGGCAAACTGATTCTTTGTACCTCTAAGGGCAAAGAATGACCCGATGATGAAACAA
. : . : . : . : . : . :
rJMSF031G02- CATCCAAGAGTGAAGCAAATAGCAAACTTCTGAGGCACCAACACAATAACAGGAAGGAAC
rJMSF042B06- CATCCAAGAGTGAAGCAAATAGCAAACTTCTGAGGCACCAACACAATAACAGGAAGGAAC
rJMSF012I13- CATCCAAGAGTGAAGCAAATAGCAAACTTCTGAGGCACCAACACAATAACAGGAAGGAAC
JMSF012I13+ CATCCAAGAGTGAAGCAAATAGCAAACTTCTGAGGCACCAACACAATAACAGGAAGGAAC
JMSF031G02+ CATCCAAGAGTGAAGCAAATAGCAAACTTCTGAGGCACCAACACAATAACAGGAAGGAAC
JMFN012K17+ CATCCAAGAGTGAAGCAAATAGCAAACTTCTGAGGCACCAACACAATAACAGGAAGGAAC
JMSF042B06+ CATCCAAGAGTGAAGCAAATAGCAAACTTCTGAGGCACCAACACAATAACAGGAAGGAAC
____________________________________________________________
consensus CATCCAAGAGTGAAGCAAATAGCAAACTTCTGAGGCACCAACACAATAACAGGAAGGAAC
. : . : . : . : . : . :
rJMSF031G02- AAAGCAAATGCCATGAAAATGAATAAGACTCCACTTGCTAGAAATAAGCCAAAGTACATG
rJMSF042B06- AAAGCAAATGCCATGAAAATGAATAAGACTCCACTTGCTAGAAATAAGCCAAAGTACATG
rJMSF012I13- AAAGCAAATGCCATGAAAATGAATAAGACTCCACTTGCTAGAAATAAGCCAAAGTACATG
JMSF012I13+ AAAGCAAATGCCATGAAAATGAATAAGACTCCACTTGCTAGAAATAAGCCAAAGTACATG
JMSF031G02+ AAAGCAAATGCCATGAAAATGAATAAGACTCCACTTGCTAGAAATAAGCCAAAGTACATG
JMFN012K17+ AAAGCAAATGCCATGAAAATGAATAAGACTCCACTTGCTAGAAATAAGCCAAAGTACATG
JMSF042B06+ AAAGCAAATGCCATGAAAATGAATAAGACTCCACTTGCTAGAAATAAGCCAAAGTACATG
____________________________________________________________
consensus AAAGCAAATGCCATGAAAATGAATAAGACTCCACTTGCTAGAAATAAGCCAAAGTACATG
. : . : . : . : . : . :
rJMSF031G02- AGCGCTTTTCCAGAGGGAATATTACTGGTGGCAGACTGCAAACTCCCTGGTATGTCTCTC
rJMSF042B06- AGCGCTTTTCCAGAGGGAATATTACTGGTGGCAGACTGCAAACTCCCTGGTATGTCTCTC
rJMSF012I13- AGCGCTTTTCCAGAGGGAATATTACTGGTGGCAGACTGCAAACTCCCTGGTATGTCTCTC
JMSF012I13+ AGCGCTTTTCCAGAGGGAATATTACTGGTGGCAGACTGCAAACTCCCTGGTATGTCTCTC
JMSF031G02+ AGCGCTTTTCCAGAGGGAATATTACTGGTGGCAGACTGCAAACTCCCTGGTATGTCTCTC
JMFN012K17+ AGCGCTTTTCCAGAGGGAATATTACTGGTGGCAGACTGCAAACTCCCTGGTATGTCTCTC
JMSF042B06+ AGCGCTTTTCCAGAGGGAATATTACTGGTGGCAGACTGCAAACTCCCTGGTATGTCTCTC
____________________________________________________________
consensus AGCGCTTTTCCAGAGGGAATATTACTGGTGGCAGACTGCAAACTCCCTGGTATGTCTCTC
. : . : . : . : . : . :
rJMSF031G02- ACTCCTTTTGAAACTACGTTGAAAGTACCAGACACGGTGTCGTTTGCGGACCGCACAGCA
rJMSF042B06- ACTCCTTTTGAAACTACGTTGAAAGTACCAGACACGGTGTCGTTTGCGGACCGCACAGCA
rJMSF012I13- ACTCCTTTTGAAACTACGTTGAAAGTACCAGACACGGTGTCGTTTGCGGACCGCACAGCA
JMSF012I13+ ACTCCTTTTGAAACTACGTTGAAAGTACCAGACACGGTGTCGTTTGCGGACCGCACAGCA
JMSF031G02+ ACTCCTTTTGAAACTACGTTGAAAGTACCAGACACGGTGTCGTTTGCGGACCGCACAGCA
JMFN012K17+ ACTCCTTTTGAAACTACGTTGAAAGTACCAGACACGGTGTCGTTTGCGGACCGCACAGCA
JMSF042B06+ ACTCCTTTTGAAACTACGTTGAAAGTACCAGACACGGTGTCGTTTGCGGACCGCACAGCA
____________________________________________________________
consensus ACTCCTTTTGAAACTACGTTGAAAGTACCAGACACGGTGTCGTTTGCGGACCGCACAGCA
. : . : . : . : . : . :
rJMSF031G02- GCTTCGAGATCGAATGCGGCAATGAGGGAACTACTGGCGCCGTCGCCATCAGACGCTTTT
rJMSF042B06- G
rJMSF012I13- GCTTCGAGATCGAATGCGGCAATGAGGGAACTACTGGCGCCGTCGCCATCAGACGC-TTT
JMSF012I13+ GCTTCGAGATCGAATGCGGCAATGAGGGAACTACTGGCGCCGTCGCCATCAGACGCTTTT
JMSF031G02+ GCTTCGAGATCGAATGCGGCAATGAGGGAACTACTGGCGCCGTCGCCATCAGACGCTTTT
JMFN012K17+ GCTTCGAGATCGAATGCGGCAATGAGGGAACTACTGGCGCCGTCGCCATCAGACGCTTTT
JMSF042B06+ GCTTCGAGATCGAATGCGGCAATGAGGGAACTACTGGCGCCGTCGCCATCAGACGCTTTT
____________________________________________________________
consensus GCTTCGAGATCGAATGCGGCAATGAGGGAACTACTGGCGCCGTCGCCATCAGACGCTTTT
. : . : . : . : . : . :
rJMSF031G02- GTGGAAGCATATGAGTTCCA
rJMSF012I13- GTGGAAGCATATGAGTTCCA
JMSF012I13+ GTGGAAGCATATGAGTTCCAATCAGCCAAGAGAGACGGAGAAGACGCGGCAGTCGTTTGC
JMSF031G02+ GTGGAAGCATATGAGTTCCAATCAGCCAAGAGAGACGGAGAAGACGCGGCAGTCGTTTGC
JMFN012K17+ GTGGAAGCATATGAGTTCCAATCAGCCAAGAGAGACGGAGAAGACGCGGCAGTCGTTTGC
JMSF042B06+ GTGGAAGCATATGAGTTCCAATCAGCCAAGAGAGACGGAGAAGACGCGGCAGTCGTTTGC
____________________________________________________________
consensus GTGGAAGCATATGAGTTCCAATCAGCCAAGAGAGACGGAGAAGACGCGGCAGTCGTTTGC
. : . : . : . : . : . :
JMSF012I13+ TGCTGCTGCTGCCGAGCATCATCGCCGGCGCTGGAGCCTGAAAACCACTTCTGCATTTCG
JMSF031G02+ TGCTGCTGCTGCCGAGCATCATCGCCGGCGCTGGAGCCTGAAAACCACTTCTGCATTTCG
JMFN012K17+ TGCTGCTGCT
JMSF042B06+ TGCTGCTGCTGCCGAGCATCATCGCCGGCGCTGGAGCCTGAAAACCACTTCTGCATTTCG
____________________________________________________________
consensus TGCTGCTGCTGCCGAGCATCATCGCCGGCGCTGGAGCCTGAAAACCACTTCTGCATTTCG
. : . : . : . : . : . :
JMSF012I13+ TAACAGGAATATTTATCTATCAAGGAGCCGCTTTAACGAAGACTACGACGCGACACCACT
JMSF031G02+ TAACAGGAATATTTATCTATCAAGGAGCCGCTTTAACGAAGACTACGACGCGACACCACT
JMSF042B06+ TAACAGGAATATTTATCTATCAAGGAGCCGCTTTAACGAAGACTACGACGCGACACCACT
____________________________________________________________
consensus TAACAGGAATATTTATCTATCAAGGAGCCGCTTTAACGAAGACTACGACGCGACACCACT
. : . : . : . : . : . :
JMSF012I13+ GGTTTCGTTGCTTGTAGCTCTCCAGTCGAAGATGGAGCGTCCGGATC
JMSF031G02+ GGTTTCGTTGCTTGTAGCTCTCCAGTCGAAGATGGAGCGTCCGGATC
JMSF042B06+ GGTTTCGTTGCTTGTAGCTCTCCAGTCGAAGATGGAGCGTCCGGATCGGATCGGAACGTC
____________________________________________________________
consensus GGTTTCGTTGCTTGTAGCTCTCCAGTCGAAGATGGAGCGTCCGGATCGGATCGGAACGTC