Contig 003832:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF039B20Sequence657003832 (2)ref|XP_009625617.1|179PREDICTED: uncharacterized protein LOC104116463 [Nicotiana tomentosiformis] ref|778001444 (2)ref|XP_009625617.1|191PREDICTED: uncharacterized protein LOC104116463 [Nicotiana tomentosiformis] ref|
JMSF041L12Sequence759003832 (2)ref|XP_009625617.1|234PREDICTED: uncharacterized protein LOC104116463 [Nicotiana tomentosiformis] ref|777001444 (2)ref|XP_009781567.1|239PREDICTED: uncharacterized protein LOC104230446 [Nicotiana sylvestris] ref|XP_00

Alignment

This contig is upended


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JMSF041L12+                                TCTCTGTTCTGGTCCACTAAGACATGCACTGATATTGTT
                      ____________________________________________________________
consensus                                  TCTCTGTTCTGGTCCACTAAGACATGCACTGATATTGTT
 
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JMSF041L12+           CCAGACCACCAAAGGAATTTCCACATGGCAGCTTGTTCCAGTTCCACAACCTGCCTCGGG
                      ____________________________________________________________
consensus             CCAGACCACCAAAGGAATTTCCACATGGCAGCTTGTTCCAGTTCCACAACCTGCCTCGGG
 
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JMSF039B20+             TTCATCAAGCAATACCTTCCTTGATATTACTTTCTGAATATTCTTGAAAACTCTCTTA
JMSF041L12+           CCTTCATCAAGCAATACCTTCCTTGATATTACTTTCTGAATATTCTTGAAAACTCTCTTA
                      ____________________________________________________________
consensus             CCTTCATCAAGCAATACCTTCCTTGATATTACTTTCTGAATATTCTTGAAAACTCTCTTA
 
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JMSF039B20+           TTTTCAGGGTCAGTTACAATATTGTAAACGGCATCTGGTGGCAATCCAACATTGACTTTC
JMSF041L12+           TTTTCAGGGTCAGCTACAATATTGTAAACGGCATCTGGTGGCAATCCAACATTGACTTTC
                      ____________________________________________________________
consensus             TTTTCAGGGTCAGTTACAATATTGTAAACGGCATCTGGTGGCAATCCAACATTGACTTTC
 
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JMSF039B20+           GCATTCAGGTTGCACAGAGAACCTTTAGGTACAGTCACCTTTATTTCCGGAGGATGATCG
JMSF041L12+           GCATTCAGGTTGCACAGAGAACCTTTAGGTACAGTCACCTTTATTTCCGGAGGATGATCG
                      ____________________________________________________________
consensus             GCATTCAGGTTGCACAGAGAACCTTTAGGTACAGTCACCTTTATTTCCGGAGGATGATCG
 
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JMSF039B20+           GTCCATGTAGGATTCTCTTTCCAAGGTTGCATTTGCTTCTCCAGATCAACATCTAAGATA
JMSF041L12+           GTCCATGTAGGATTCTCTTTCCAAGGTTGCATTTGCTTCTCCAGATCAACATNTAAGATA
                      ____________________________________________________________
consensus             GTCCATGTAGGATTCTCTTTCCAAGGTTGCATTTGCTTCTCCAGATCAACATCTAAGATA
 
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JMSF039B20+           CCAAATGCTCCTTTCTTTCCCACAAACGATGACATTAACACATCTCCATCCCTTCTCATT
JMSF041L12+           CCAAATGCTCCTTTCTTTCCCACAAACGATGACATTAACACATCTCCATCCCTTCTCATT
                      ____________________________________________________________
consensus             CCAAATGCTCCTTTCTTTCCCACAAACGATGACATTAACACATCTCCATCCCTTCTCATT
 
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JMSF039B20+           CTTTTAAAATTTGACTTGAGAGCCTTTTCGATTTTTGACTGGAAATCCGATAAAAAGGGA
JMSF041L12+           CTTTTAAAATTTGACTTGAGAGCCTTTTCGATTTTTGACTGGAAATCCGATAAAAAGGGA
                      ____________________________________________________________
consensus             CTTTTAAAATTTGACTTGAGAGCCTTTTCGATTTTTGACTGGAAATCCGATAAAAAGGGA
 
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JMSF039B20+           TGCATAACTGAACTCGACAATCTTGCATGTTCACTGCTCTCGTCCACTGGAATTTCATTG
JMSF041L12+           TGCATAACTGAACTCGACAATCTTGCACGTTCACTGCTCTCGTCCACTGGAATTTCATTG
                      ____________________________________________________________
consensus             TGCATAACTGAACTCGACAATCTTGCATGTTCACTGCTCTCGTCCACTGGAATTTCATTG
 
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JMSF039B20+           TTCTGCTTATCTAATTTCATCTCGCCTGCTACAAGCCTACATTAATCGCAAAATCCAACA
JMSF041L12+           TTCTGCTTATCTAATTTCATCTCGCCTGCTACAAGCCTACATTAATCGCAAAATCCAACA
                      ____________________________________________________________
consensus             TTCTGCTTATCTAATTTCATCTCGCCTGCTACAAGCCTACATTAATCGCAAAATCCAACA
 
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JMSF039B20+           GGTGGAGCAGAATGATTCAGAGGATATTCTGATTAGAAAAAAAACAACTCAATCCTTGAA
JMSF041L12+           GGTGGAGCAGAATGATTCAGAGGATATTCTGATTAGAAAAAAAACAACTCAATCCTTGAA
                      ____________________________________________________________
consensus             GGTGGAGCAGAATGATTCAGAGGATATTCTGATTAGAAAAAAAACAACTCAATCCTTGAA
 
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JMSF039B20+           GATCATTAAGCTCCAAAACGACCAATAAATCAACATTTCACTTTTCAAGATCTCCTTATC
JMSF041L12+           GATCATTAAGCTCCAAAACGACCAATAAATCAACATTTCACTTTTCAAGATCTCCTTATC
                      ____________________________________________________________
consensus             GATCATTAAGCTCCAAAACGACCAATAAATCAACATTTCACTTTTCAAGATCTCCTTATC
 
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JMSF039B20+           TGTTCTTGCTTCTTTTATTGCATCGTTGAATGTTGAGTGTCCTCTTCCTCCTCTTCTTC 
JMSF041L12+           TGTTCTTGCTTCTTTTATTGCATCGTTGAATGTTGAGTGTCCTCTTCCTCCTCTTCTTCC
                      ____________________________________________________________
consensus             TGTTCTTGCTTCTTTTATTGCATCGTTGAATGTTGAGTGTCCTCTTCCTCCTCTTCTTCC