Contig 003831:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS063A08Sequence633003831 (5)ref|XP_011089716.1|1e-77PREDICTED: cationic amino acid transporter 9, chloroplastic-like [Sesamum indic
JMSF015N17Sequence499003831 (5)ref|XP_006359586.1|4e-57PREDICTED: cationic amino acid transporter 9, chloroplastic-like [Solanum tuber772002956 (5)ref|XP_011093273.1|2e-93PREDICTED: cationic amino acid transporter 9, chloroplastic-like [Sesamum indic
JMSF033L06Sequence679003831 (5)ref|XP_011089716.1|7e-88PREDICTED: cationic amino acid transporter 9, chloroplastic-like [Sesamum indic699002956 (5)ref|XP_011093273.1|4e-87PREDICTED: cationic amino acid transporter 9, chloroplastic-like [Sesamum indic
JMSF041K23Sequence821003831 (5)ref|XP_011089716.1|1e-106PREDICTED: cationic amino acid transporter 9, chloroplastic-like [Sesamum indic607002956 (5)ref|XP_009591077.1|1e-60PREDICTED: cationic amino acid transporter 9, chloroplastic [Nicotiana tomentos
JMSF043M12Sequence795003831 (5)ref|XP_011089716.1|6e-93PREDICTED: cationic amino acid transporter 9, chloroplastic-like [Sesamum indic756002956 (5)ref|XP_009591077.1|8e-60PREDICTED: cationic amino acid transporter 9, chloroplastic [Nicotiana tomentos

Alignment

This contig is upended


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JMSF041K23+                              GTTAATATTGCTTTAAAACCATTTGGAGCATATGGGGTCCA
                      ____________________________________________________________
consensus                                GTTAATATTGCTTTAAAACCATTTGGAGCATATGGGGTCCA
 
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JMSF043M12+                                                                  ACCTT
JMSF041K23+           ATTTGAAACATCAACCTCAAAAGTTCCAACAATGATGACAATGATAACAATAACTACCTT
                      ____________________________________________________________
consensus             ATTTGAAACATCAACCTCAAAAGTTCCAACAATGATGACAATGATAACAATAACTACCTT
 
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JMSF033L06+                            AATTCAACATAGAGGATTCTCCAACACCCCGACATAGAACTAT
JMSF043M12+           CGTCACTGTCATTATTGAATTCAACATAGAGGATTCTCCAACACCCCGACATAGAACTAT
JMSF041K23+           CGTCACTGTCATTATTGAATTCAACATAGAGGATTCTCCAACACCCCGACATAGAACTAT
                      ____________________________________________________________
consensus             CGTCACTGTCATTATTGAATTCAACATAGAGGATTCTCCAACACCCCGACATAGAACTAT
 
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JMSF033L06+           TGTCAGAACTATAAGTAGAACTGGAGCTAATAGGTTAAAAGAAAATGCTCCCAAATACTC
JMFS063A08+             TCAGAACTATAAGTAGAACTGGAGCTAATAGGTTAAAAGAAAATGCTCCCAAATACTC
JMSF043M12+           TGTCAGAACTATAAGTAGAACTGGAGCTAATAGGTTAAAAGAAAATGCTCCCAAATACTC
JMSF041K23+           TGTCAGAACTATAAGTAGAACTGGAGCTAATAGGTTAAAAGAAAATGCTCCCAAATACTC
                      ____________________________________________________________
consensus             TGTCAGAACTATAAGTAGAACTGGAGCTAATAGGTTAAAAGAAAATGCTCCCAAATACTC
 
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JMSF033L06+           TTCACTACCATGCCCAACCCAGTTGGGAATGCTATCCTTGAAAAAGGGAATGAGCTCTAA
JMFS063A08+           TTCACTACCATGCCCAACCCAGTTGGGAATGCTATCCTTGAAAAAGGGAATGAGCTCTAA
JMSF043M12+           TTCACTACCATGCCCAACCCAGTTGGGAATGCTATCCTTGAAAAAGGGAATGAGCTCTAA
JMSF041K23+           TTCACTACCATGCCCAACCCAGTTGGGAATGCTATCCTTGAAAAAGGGAATGAGCTCTAA
                      ____________________________________________________________
consensus             TTCACTACCATGCCCAACCCAGTTGGGAATGCTATCCTTGAAAAAGGGAATGAGCTCTAA
 
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JMSF033L06+           TGCATTAATTACATAGCTTGCTAAACTACGTGCAATGCTAGCTGCACCAATATGATAGTC
JMFS063A08+           TGCATTAATTACATAGCTTGCTAAACTACGTGCAATGCTAGCTGCACCAATATGATAGTC
JMSF015N17+              ATTAATTACATAGCTTGNTAAACTACGTGCAATGCTAGCTGCACCAATATGATAGTC
JMSF043M12+           TGCATTAATTACATAGCTTGCTAAACTACGTGCAATGCTAGCTGCACCAATATGATAGTC
JMSF041K23+           TGCATTAATTACATAGCTTGCTAAACTACGTGCAATGCTAGCTGCACCAATATGATAGTC
                      ____________________________________________________________
consensus             TGCATTAATTACATAGCTTGCTAAACTACGTGCAATGCTAGCTGCACCAATATGATAGTC
 
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JMSF033L06+           AAGCATCAACTGAGCAAAAACAAGAAAAGCAGTAAGCTCATTAAAAGCTGTGTATGTGTA
JMFS063A08+           AAGCATCAACTGAGCAAAAACAAGAAAAGCAGTAAGCTCATTAAAAGCTGTGTATGTGTA
JMSF015N17+           AAGCATCAACTGAGCAAAAACAAGAAAAGCAGTAAGCTCATTAAAAGCTGTGTATGTGTA
JMSF043M12+           AAGCATCAACTGAGCAAAAACAAGAAAAGCAGTAAGCTCATTAAAAGCTGTGTATGTGTA
JMSF041K23+           AAGCATCAACTGAGCAAAAACAAGAAAAGCAGTAAGCTCATTAAAAGCTGTGTATGTGTA
                      ____________________________________________________________
consensus             AAGCATCAACTGAGCAAAAACAAGAAAAGCAGTAAGCTCATTAAAAGCTGTGTATGTGTA
 
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JMSF033L06+           TAAGTAAGCTCCACCAACAACTGCAGGAAAGCGTGACGCAAGTTCAGCATAGCAGAGTGC
JMFS063A08+           TAAGTAAGCTCCACCAACAACTGCAGGAAAGCGTGACGCAAGTTCAGCATAGCAGAGTGC
JMSF015N17+           TAAGTAAGCTCCACCAACAACTGCAGGAAAGCGTGACGCAAGTTCAGCATAGCAGAGTGC
JMSF043M12+           TAAGTAAGCTCCACCAACAACTGCAGGAAAGCGTGACGCAAGTTCAGCATAGCAGAGTGC
JMSF041K23+           TAAGTAAGCTCCACCAACAACTGCAGGAAAGCGTGACGCAAGTTCAGCATAGCAGAGTGC
                      ____________________________________________________________
consensus             TAAGTAAGCTCCACCAACAACTGCAGGAAAGCGTGACGCAAGTTCAGCATAGCAGAGTGC
 
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JMSF033L06+           ATTGAGAACACAGGATAGTCCTGCAATTAAGAAACTGATAGTGACACCGGGACCCGCATC
JMFS063A08+           ATTGAGAACACAGGATAGTCCTGCAATTAAGAAACTGATAGTGACACCGGGACCCGCATC
JMSF015N17+           ATTGAGAACACAGGATAGTCCTGCAATTAAGAAACTGATAGTGACACCGGGACCCGCATC
JMSF043M12+           ATTGAGAACACAGGATAGTCCTGCAATTAAGAAACTGATAGTGACACCGGGACCCGCATC
JMSF041K23+           ATTGAGAACACAGGATAGTCCTGCAATTAAGAAACTGATAGTGACACCGGGACCCGCATC
                      ____________________________________________________________
consensus             ATTGAGAACACAGGATAGTCCTGCAATTAAGAAACTGATAGTGACACCGGGACCCGCATC
 
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JMSF033L06+           GTGGGCAACGGTACCGGTGACGACAAAGATTCCAGCTCCAATGGAGGCGCCAATACCTAG
JMFS063A08+           GTGGGCAACGGTACCGGTGACGACAAAGATTCCAGCTCCAATGGAGGCGCCAATACCTAG
JMSF015N17+           GTGGGCAACGGTACCGGTGACGACAAAGATTCCAGCTCCAATGGAGGCGCCAATACCTAG
JMSF043M12+           GTGGGCAACGGTACCGGTGACGACAAAGATTCCAGCTCCAATGGAGGCGCCAATACCTAG
JMSF041K23+           GTGGGCAACGGTACCGGTGACGACAAAGATTCCAGCTCCAATGGAGGCGCCAATACCTAG
                      ____________________________________________________________
consensus             GTGGGCAACGGTACCGGTGACGACAAAGATTCCAGCTCCAATGGAGGCGCCAATACCTAG
 
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JMSF033L06+           GAGAATGAGATCGAAGAGGCCAAGACGGCGTACTAGGCCCTCGCCGGAGACTGTCCGGAC
JMFS063A08+           GAGAATGAGATCGAAGAGGCCAAGACGGCGTACTAGGCCCTCGCCGGAGACTGTCCGGAC
JMSF015N17+           GAGAATGAGATCGAAGAGGCCAAGACGGCGTACTAGGCCCTCGCCGGAGACTGTCCGGAC
JMSF043M12+           GAGAATGAGATCGAAGAGGCCAAGACGGCGTACTAGGCCCTCGCCGGAGACTGTCCGGAC
JMSF041K23+           GAGAATGAGATCGAAGAGGCCAAGACGGCGTACTAGGCCCTCGCCGGAGACTGTCCGGAC
                      ____________________________________________________________
consensus             GAGAATGAGATCGAAGAGGCCAAGACGGCGTACTAGGCCCTCGCCGGAGACTGTCCGGAC
 
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JMSF033L06+           GGCGGCATCGGACGGCGGAGCTAGAGGTTTGGACCGCCTAGCGGATGACCAAAAGTGAGC
JMFS063A08+           GGCGGCATCGGACGGCGGAGCTAGAGGTTTGGACCGCCTAGCGGATGACCAAAAGTGAGC
JMSF015N17+           GGCGGCATCGGACGGCGGAGCTAGAGGTTTGGACCGCCTAGCGGATGACCAAAAGTGAGC
JMSF043M12+           GGCGGCATCGGACGGCGGAGCTAGAGGTTTGGACCGCCTAGCGGATGACCAAAAGTGAGC
JMSF041K23+           GGCGGCATCGGACGGCGGAGCTAGAGGTTTGGACCGCCTAGCGGATGACCAAAAGTGAGC
                      ____________________________________________________________
consensus             GGCGGCATCGGACGGCGGAGCTAGAGGTTTGGACCGCCTAGCGGATGACCAAAAGTGAGC
 
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JMSF033L06+           GAAGCATGAGGTGGACGAGGATGAAGTATCGTCGGGGCGCTTATCGACCCGCATCGTTAC
JMFS063A08+           GAAGCATGAGGTGGACGAGGATGAAGTATCGTCGGGGCGCTTATCGACCCGCATCGTTAC
JMSF015N17+           GAAGCATGAGGTGGACGAGGATGAAGTATCGTCGGGGCGCTTATCGACCCGCATCGTTAC
JMSF043M12+           GAAGCATGAGGTGGACGAGGATGAAGTATCGTCGGGGCGCTTATCGACCCGCATCGTTAC
JMSF041K23+           GAAGCATGAGGTGGACGAGGATGAAGTATCGTCGGGGCGCTTATCGACCCGCATCGTTAC
                      ____________________________________________________________
consensus             GAAGCATGAGGTGGACGAGGATGAAGTATCGTCGGGGCGCTTATCGACCCGCATCGTTAC
 
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JMSF033L06+           TTTATTTCCCGATGATCTCTCAATGCTGTCTTCAC                         
JMFS063A08+           TTTATTTCCCGATGATCTCTCAATGCTGTCTTCAC                         
JMSF015N17+           TTTATTTCCCGATGATCTCTC                                       
JMSF043M12+           TTTATTTCCCGATGATCTCTCAATGCTGTCTTCAC                         
JMSF041K23+           TTTATTTCCCGATGATCTCTCAATGCTGTCTTCACGGAAGTCAGCAGCAGATATTTCGAC
                      ____________________________________________________________
consensus             TTTATTTCCCGATGATCTCTCAATGCTGTCTTCACGGAAGTCAGCAGCAGATATTTCGAC