| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF023G07 | Sequence | 433 | 003829 (8) | ref|XP_011074193.1| | 5e-07 | PREDICTED: probable pectin methyltransferase QUA2 [Sesamum indicum] ref|XP_01107 | 645 | 011195 (4) | gb|ACJ85808.1| | 9e-54 | unknown [Medicago truncatula] |
| JMFF045L07 | Sequence | 644 | 003829 (8) | ref|XP_006367734.1| | 2e-52 | PREDICTED: probable pectin methyltransferase QUA2-like [Solanum tuberosum] | 624 | 011195 (4) | ref|XP_009760349.1| | 1e-37 | PREDICTED: probable pectin methyltransferase QUA2 [Nicotiana sylvestris] |
| JMFF047E20 | Sequence | 445 | 003829 (8) | ref|XP_011074193.1| | 5e-06 | PREDICTED: probable pectin methyltransferase QUA2 [Sesamum indicum] ref|XP_01107 | 418 | 011195 (4) | |||
| JMFS046A07 | Sequence | 563 | 003829 (8) | ref|XP_006367734.1| | 4e-31 | PREDICTED: probable pectin methyltransferase QUA2-like [Solanum tuberosum] | |||||
| JMFS048H04 | Sequence | 600 | 003829 (8) | ref|XP_010320179.1| | 2e-35 | PREDICTED: probable pectin methyltransferase QUA2 [Solanum lycopersicum] | |||||
| JMFS081B05 | Sequence | 624 | 003829 (8) | ref|XP_006367734.1| | 3e-27 | PREDICTED: probable pectin methyltransferase QUA2-like [Solanum tuberosum] | |||||
| JMFS154F04 | Sequence | 629 | 003829 (8) | ref|XP_006367734.1| | 4e-26 | PREDICTED: probable pectin methyltransferase QUA2-like [Solanum tuberosum] | |||||
| JMSF041E16 | Sequence | 761 | 003829 (8) | ref|XP_006367734.1| | 2e-39 | PREDICTED: probable pectin methyltransferase QUA2-like [Solanum tuberosum] | 610 | 011195 (4) | gb|ACJ85808.1| | 9e-42 | unknown [Medicago truncatula] |
This contig is upended
. : . : . : . : . : . :
JMFF045L07+ TCTCG
JMFS046A07+ CATCAGTCTCG
JMSF041E16+ TCTCG
____________________________________________________________
consensus CATCAGTCTCG
. : . : . : . : . : . :
JMFF045L07+ GGAGGACAGTACTCGAGATCCTTCAGCTTAGCAGAACCGAGAGAAATCTGCCCAATTTCC
JMFS046A07+ GGAGGACAGTACTCGATATCCTTCAGCTTAGCAGAACCGAGAGAAATCTGCCCAATTTCC
JMSF041E16+ GGAGGACAGTACTCGAGATCCTTCAGCTTAGCAGAACCGAGAGAAATCTGCCCAATTTCC
____________________________________________________________
consensus GGAGGACAGTACTCGAGATCCTTCAGCTTAGCAGAACCGAGAGAAATCTGCCCAATTTCC
. : . : . : . : . : . :
JMFF045L07+ TTCAAATCCAACACGACTTGTTCCTGAAGCCGGCGATCCCCACGATACACTTCACCCTTT
JMFS046A07+ TTCAAATCCAACACGACTTGTTCCTGAAGCCGGCGATCCCCACGATACACTTCACCCTTT
JMFS154F04+ CCAACACGACTTGTTCCTGAAGCCGGCGATCCCCACGATACACTTCACCCTTT
JMFS081B05+ TTCAAATCCAACACGACTTGTTCCTGAAGCCGGCGATCCCCACGATACACTTCACCCTTT
JMSF041E16+ TTCAAATCCAACACGACTTGTTCCTGAAGCCGGCGATCCCCACGATACACTTCACCCTTT
____________________________________________________________
consensus TTCAAATCCAACACGACTTGTTCCTGAAGCCGGCGATCCCCACGATACACTTCACCCTTT
. : . : . : . : . : . :
JMFF045L07+ GATGTTCGGGTCATCGCCATTGTCCACCAAAAGGATTCAGTAAGAGCAACAACTACTATT
JMFS046A07+ GATGTTCGGGTCATCGCCATTGTCCACCAAAAGGATTCAGTAAGAGCAACAACTACTATT
JMFS154F04+ GATGTTCGGGTCATCGCCATTGTCCACCAAAAGGATTCAGTAAGAGCAACAACTACTATT
JMFS081B05+ GATGTTCGGGTCATCGCCATTGTCCACCAAAAGGATTCAGTAAGAGCAACAACTACTATT
JMSF041E16+ GATGTTCGGGTCATCGCCATTGTCCACCAAAAGGATTCAGTAAGAGCAACAACTACTATT
____________________________________________________________
consensus GATGTTCGGGTCATCGCCATTGTCCACCAAAAGGATTCAGTAAGAGCAACAACTACTATT
. : . : . : . : . : . :
JMFF045L07+ GCAACTAAACTCAATTTGAGCAAATGCAAGGTGAACTTTAGTCTATTCCGCCGAGTTCCA
JMFS046A07+ GCAACTAATCTCAATTTGAGCAAATGCAAGGTGAACTTTAGTCTATTCCGCCGAGTTCCA
JMFS154F04+ GCAACTAAACTCAATTTGAGCAAATGCAAGGTGAACTTTAGTCTATTCCGCCGAGTTCCA
JMFS081B05+ GCAACTAAACTCAATTTGAGCAAATGCAAGGTGAACTTTAGTCTATTCCGCCGAGTTCCA
JMSF041E16+ GCAACTAAACTCAATTTGAGCAAATGCAAGGTGAACTTTAGTCTATTCCGCCGAGTTCCA
____________________________________________________________
consensus GCAACTAAACTCAATTTGAGCAAATGCAAGGTGAACTTTAGTCTATTCCGCCGAGTTCCA
. : . : . : . : . : . :
JMFF045L07+ CTAACACAATGTTTCAAGGATGAATCATCAGGGAAAATAATCCTTAAAGGGAGTTTTATA
JMFS046A07+ CTAACACAATGTTTCAAGGATGAATCATCAGGGAAAATAATCCTTAAAGGGAGTTTAATA
JMFS154F04+ CTAACACAATGTTTCAAGGATGAATCATCAGGGAAAATAATCCTTAAAGGGAGTTTTATA
JMFS081B05+ CTAACACAATGTTTCAAGGATGAATCATCAGGGAAAATAATCCTTAAAGGGAGTTTTATA
JMFF023G07+ CCTTAAAGGGAGTTTTATA
JMFF047E20+ ATCCTTAAAGGGAGTNTTATA
JMSF041E16+ CTAACACAATGTTTCAAGGATGAATCATCAGGGAAAATAATCCTTAAAGGGAGTTTTATA
____________________________________________________________
consensus CTAACACAATGTTTCAAGGATGAATCATCAGGGAAAATAATCCTTAAAGGGAGTTTTATA
. : . : . : . : . : . :
JMFF045L07+ GGC-CAACAAGTATGATCCTTAGTTGATTGAAAATTGTCCAATTCTTGTTCTTCCTCCTC
JMFS046A07+ GTCTCAACAAGTATGATCCTTAGTTGATTGAAAANTGTCCAATTCTTGTTCTTCCTCCTC
JMFS154F04+ GGC-CAACAAGTATGATCCTTAGTTGATTGAAAATTGTCCAATTCTTGTTCTTCCTCCTC
JMFS048H04+ GATCCTTAGTTGATTGAAAATTGTCCAATTCTTGTTCTTCCTCCTC
JMFS081B05+ GGC-CAACAAGTATGATCCTTAGTTGATTGAAAATTGTCCAATTCTTGTTCTTCCTCCTC
JMFF023G07+ GGC-CAACAAGTATGATCCTTAGTTGATTGAAAATTGTCCAATTCTTGTTCTTCCTCCTC
JMFF047E20+ GGC-CAACAAGTATGATCCTTAGTTGATTGAAAATTGTCCAATTCTNGTTCTTCCTCCTC
JMSF041E16+ GGC-CAACAAGTATGATCCTTAGTTGATTGAAAATTGTCCAATTCTTGTTCTTCCTCCTC
____________________________________________________________
consensus GGC-CAACAAGTATGATCCTTAGTTGATTGAAAATTGTCCAATTCTTGTTCTTCCTCCTC
. : . : . : . : . : . :
JMFF045L07+ TATCCTATCTTTCTTCTGAGAATCATCCCAGAATTCATGGTTGTTCCCATAGAACTTCCC
JMFS046A07+ TATCCTATCTTTCTTTTGAGAATCATCCCAGAATTCATGGTTGTTCCCATAGAACTTCCC
JMFS154F04+ TATCCTATCTTTCTTCTGAGAATCATCCCAGAATTCATGGTTGTTCCCATAGAACTTCCC
JMFS048H04+ TATCCTATCTTTCTTCTGAGAATCATCCCAGAATTCATGGTTGTTCCCATAGAACTTCCC
JMFS081B05+ TATCCTATCTTTCTTCTGAGAATCATCCCAGAATTCATGGTTGTTCCCATAGAACTTCCC
JMFF023G07+ TATCCTATCTTTCTTCTGAGAATCATCCCAGAATTCATGGTTGTTCCCATAGAACTTCCC
JMFF047E20+ TATCCTATCTTTCTTCTGAGAATCATCCCAGAATTCATGGTTGTTCCCATAGAACTTCCC
JMSF041E16+ TATCCTATCTTTCTTCTGAGAATCATCCCAGAATTCATGGTTGTTCCCATAGAACTTCCC
____________________________________________________________
consensus TATCCTATCTTTCTTCTGAGAATCATCCCAGAATTCATGGTTGTTCCCATAGAACTTCCC
. : . : . : . : . : . :
JMFF045L07+ CT-CACCCCCACCAGAAACACCTCTATACAATGGCCTTGCCATCATCGCCATGTCCAAAT
JMFS046A07+ CT-CACCCCCACCAGAAACTCCTCTATACAATGGCCTTGCCATCATCGCCANGNCCAAAT
JMFS154F04+ CT-CACCCCCACCAGAAACACCTCTATACAATGGCCTTGCCATCATCGCCATGTCCAAAT
JMFS048H04+ CT-CACCCCCACCAGAAACACCTCTATACAATGGCCTTGCCATCATCGCCATGTCCAAAT
JMFS081B05+ CT-CACCCCCACCAGAAACACCTCTATACAATGGCCTTGCCATCATCGCCATGTCCAAAT
JMFF023G07+ CT-CACCCCCACCAGAAACACCTCTATACAATGGCCTTGCCATCATCGCCATGTCCAAAT
JMFF047E20+ CT-CACCCCCACCAGAAACACCTCTATACAATGGCCTTGCCATCATCGCCATGTCCAAAT
JMSF041E16+ CTCCACCCCCACCAGAAACACCTCTATACAATGGCCTTGCCATCATCGCCATGTCCAAAT
____________________________________________________________
consensus CT-CACCCCCACCAGAAACACCTCTATACAATGGCCTTGCCATCATCGCCATGTCCAAAT
. : . : . : . : . : . :
JMFF045L07+ TCCACCCTTCTTCTTCTTGTTCTTCTTACTAAGAAGCCCAGAAATTCTTGAACAGCCTTA
JMFS046A07+ TCCACCCTTCTTCNTCTTGTTCTTCNNANNAAGAAGCCCAGAAAATCNTGAACAGCCNNA
JMFS154F04+ TCCACCCTTCTTCTTCTTGTTCTTCTTACTAAGAAGCCCAGAAATTCTTGAACAGCCTTA
JMFS048H04+ TCCACCCTTCTTCTTCTTGTTCTTCTTACTAAGAAGCCCAGAAATTCTTGAACAGCCTTA
JMFS081B05+ TCCACCCTTCTTCTTCTTGTTCTTCTTACTAAGAAGCCCAGAAATTCTTGAACAGCCTTA
JMFF023G07+ TCCACCCTTCTTCTTCTTGTTCTTCTTACTAAGAAGCCCAGAAATTCTTGAACAGCCTTA
JMFF047E20+ CCCACCCTTCTTCTTCTTGTTCTTCTTACTAAGAAGCCCAGAAATTCTTGAACAGCCTTA
JMSF041E16+ TCCACCCTTCTTCTTCTTGTTCTTCTTACTAAGAAGCCCAGAAATTCTTGAACAGCCTTA
____________________________________________________________
consensus TCCACCCTTCTTCTTCTTGTTCTTCTTACTAAGAAGCCCAGAAATTCTTGAACAGCCTTA
. : . : . : . : . : . :
JMFF045L07+ CGTAC
JMFS046A07+ CGGACAAAGAGAG
JMFS154F04+ CGTACAAAGAGAGCTGCAATCTTGTGGGTGTGTGTGAGTTTAAAGGAAGCATCACCGACG
JMFS048H04+ CGTACAAAGAGAGCTGCAATCTTGTGGGTGTGTGTGAGTTTAAAGGAAGCATCACCGACG
JMFS081B05+ CGTACAAAGAGAGCTGCAATCTTGTGGGTGTGTGTGAGTTTAAAGGAAGCATCACCGACG
JMFF023G07+ CGTACAAAGAGAGCTGCAATCTTGTGGGTGTGTGTGAGTTTAAAGGAAGCATCACCGACG
JMFF047E20+ CGTACAAAGAGAGCTGCAATCTTGT-GGTGTGTGTGAGTTTAAAGGAAGCATCACCGACG
JMSF041E16+ CGTACAAAGAGAGCTGCAATCTTGTGGGTGTGTGTGAGTTTAAAGGAAGCATCACCGACG
____________________________________________________________
consensus CGTACAAAGAGAGCTGCAATCTTGTGGGTGTGTGTGAGTTTAAAGGAAGCATCACCGACG
. : . : . : . : . : . :
JMFS154F04+ CAGTTTTTTTGAATTTTGGGAGAGAGAAAGAGAGAGACAGGGAATGGTATAATGCAGAGA
JMFS048H04+ CAGTTTTTTTGAATTTTGGGAGAGAGAAAGAGAGAGACAGGGAATGGTATAATGCAGAGA
JMFS081B05+ CAGTTTTTTTGAATTTTGGGAGAGAGAAAGAGAGAGACAGGGAATGGTATAATGCAGAGA
JMFF023G07+ CAGTTTTTTTGAATTTTGGGAGAGAGAAAGAGAGAGACAGGGAATGGTATAATGCAGAGA
JMFF047E20+ CAGTTTTTTTGAATTTTGGGAGAGAGAAAGAGAGAGACAGGGAATGGTATAATGCAGAGA
JMSF041E16+ CAGTTTTTTTGAATTTTGGGAGAGAGAAAGAGAGAGACAGGGAATGGTATAATGCAGAGA
____________________________________________________________
consensus CAGTTTTTTTGAATTTTGGGAGAGAGAAAGAGAGAGACAGGGAATGGTATAATGCAGAGA
. : . : . : . : . : . :
JMFS154F04+ GAATATGGATACAAATCACTACAGAACTCGCTCGTGAA
JMFS048H04+ GAATAT
JMFS081B05+ GAATATGGATACAAATCACTACAGAA
JMFF023G07+ GAATATGGATACAAATCACTACAGAACTCGCTCGTGAAACGCTTGAATCTATCGCC
JMFF047E20+ GAATATGGATACAAATCACTACAGAACTCGCTCGTGAAACGCTTGAATCTATCGCC
JMSF041E16+ GAATATGGATACAAATCACTACAGAACTCGCTCGTGAAACGCTTGAATCTATCGCCCTCC
____________________________________________________________
consensus GAATATGGATACAAATCACTACAGAACTCGCTCGTGAAACGCTTGAATCTATCGCCCTCC