| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF051M05 | Sequence | 604 | 003824 (12) | 518 | 013869 (3) | ref|XP_006596284.1| | 8e-19 | PREDICTED: ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondri | |||
| JMFS001A07 | Sequence | 536 | 003824 (12) | ||||||||
| JMFS086H12 | Sequence | 598 | 003824 (12) | ref|XP_011076022.1| | 3e-05 | PREDICTED: ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondri | |||||
| JMFS096E08 | Sequence | 603 | 003824 (12) | ||||||||
| JMFS098D05 | Sequence | 624 | 003824 (12) | ref|XP_011076022.1| | 4e-05 | PREDICTED: ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondri | |||||
| JMFS102H04 | Sequence | 611 | 003824 (12) | ||||||||
| JMFS133G05 | Sequence | 614 | 003824 (12) | ref|XP_011076023.1| | 4e-21 | PREDICTED: ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondri | |||||
| JMFS149A11 | Sequence | 532 | 003824 (12) | ||||||||
| JMFS161A09 | Sequence | 525 | 003824 (12) | ||||||||
| JMSF019G13 | Sequence | 196 | 003824 (12) | ||||||||
| JMSF040L02 | Sequence | 191 | 003824 (12) | ||||||||
| JMSF045A04 | Sequence | 182 | 003824 (12) | 510 | 013869 (3) | ref|XP_011005520.1| | 2e-53 | PREDICTED: ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondri | |||
This contig is upended
. : . : . : . : . : . :
JMFS133G05+ CTATTGAGCTCAACCAACAAAGCACTCTCCTTAGCCGCATCATTGGGGT
____________________________________________________________
consensus CTATTGAGCTCAACCAACAAAGCACTCTCCTTAGCCGCATCATTGGGGT
. : . : . : . : . : . :
JMFS133G05+ TAGCATCAGCTTCTGCAGTCAACAGCTCCAGCCGCTTCTCCTGTTTCCAGAATAACAGCC
JMFS086H12+ CAGCC
JMFS098D05+ CAGCC
____________________________________________________________
consensus TAGCATCAGCTTCTGCAGTCAACAGCTCCAGCCGCTTCTCCTGTTTCCAGAATAACAGCC
. : . : . : . : . : . :
JMFS133G05+ ATTTAAACAAATCGGACTTGAGAAGCCTCTGGAACCCTTTCTTAAACCTCGCAAACAATC
JMFS086H12+ ATTTAAACAAATCGGACTTGAGAAGCCTCTGGAACCCTTTCTTAAACCTCGCAAACAATC
JMFS098D05+ ATTTAAACAAATCGGACTTGAGAAGCCTCTGGAACCCTTTCTTAAACCTCGCAAACAATC
JMFS096E08+ TCTGGAACCCTTTCTTAAACCTCGCAAACAATC
____________________________________________________________
consensus ATTTAAACAAATCGGACTTGAGAAGCCTCTGGAACCCTTTCTTAAACCTCGCAAACAATC
. : . : . : . : . : . :
JMFS133G05+ CCATTAAGAACGCCACGATCGGCAGCCTACTCTTCACGTCCACATTTCCCACCAAACCCT
JMFS086H12+ CCATTAAGAACGCCACGATCGGCAGCCTACTCTTCACGTCCACATTTCCCACCAAACCCT
JMFS098D05+ CCATTAAGAACGCCACGATCGGCAGCCTACTCTTCACGTCCACATTTCCCACCAAACCCT
JMFS096E08+ CCATTAAGAACGCCACGATCGGCAGCCTACTCTTCACGTCCACATTTCCCACCAAACCCT
JMFF051M05+ CATTTCCCACCAAACCCT
JMFS102H04+ CACATTTCCCACCAAACCCT
____________________________________________________________
consensus CCATTAAGAACGCCACGATCGGCAGCCTACTCTTCACGTCCACATTTCCCACCAAACCCT
. : . : . : . : . : . :
JMFS133G05+ CAGATTTGACCTCTCCTTCCACTTCCCCAGCTCCGCTACTCCCCACCGCCTCGTCCGACT
JMFS086H12+ CAGATTTGACCTCTCCTTCCACTTCCCCAGCTCCGCTACTCCCCACCGCCTCGTCCGACT
JMFS098D05+ CAGATTTGACCTCTCCTTCCACTTCCCCAGCTCCGCTACTCCCCACCGCCTCGTCCGACT
JMFS096E08+ CAGATTTGACCTCTCCTTCCACTTCCCCAGCTCCGCTACTCCCCACCGCCTCGTCCGACT
JMFF051M05+ CAGATTTGACCTCTCCTTCCACTTCCCCAGCTCCGNTACTCCCCACCGCCTCGTCCGACT
JMFS161A09+ CGACT
JMFS149A11+ CGACT
JMFS001A07+ CGACT
JMFS102H04+ CAGATTTGACCTCTCCTTCCACTTCCCCAGCTCCGCTACTCCCCACCGCCTCGTCCGACT
____________________________________________________________
consensus CAGATTTGACCTCTCCTTCCACTTCCCCAGCTCCGCTACTCCCCACCGCCTCGTCCGACT
. : . : . : . : . : . :
JMFS133G05+ CAAATTTGTTCGTAGTTTGGCCGGAACTCTCATCTTCAAGTACTAATCCAGTATTTTCCG
JMFS086H12+ CAAATTTGTTCGTAGTTTGGCCGGAACTCTCATCTTCAAGTACTAATCCAGTATTTTCCG
JMFS098D05+ CAAATTTGTTCGTAGTTTGGCCGGAACTCTCATCTTCAAGTACTAATCCAGTATTTTCCG
JMFS096E08+ CAAATTTGTTCGTAGTTTGGCCGGAACTCTCATCTTCAAGTACTAATCCAGTATTTTCCG
JMFF051M05+ CAAATTTGTTCGTAGTTTGGCCGGAACTCTCATCTTCAAGTACTAATCCAGTATTTTCCG
JMFS161A09+ CAAATTTGTTCGTAGTTTGGCCGGAACTCTCATCTTCAAGTACTAATCCAGTATTTTCCG
JMFS149A11+ CAAATTTGTTCGTAGTTTGGCCGGAACTCTCATCTTCAAGTACTAATCCAGTATTTTCCG
JMFS001A07+ CAAATTTGTTCGTAGTTTGGCCGGAACTCTCATCTTCAAGTACTAATCCAGTATTTTCCG
JMFS102H04+ CAAATTTGTTCGTAGTTTGGCCGGAACTCTCATCTTCAAGTACTAATCCAGTATTTTCCG
____________________________________________________________
consensus CAAATTTGTTCGTAGTTTGGCCGGAACTCTCATCTTCAAGTACTAATCCAGTATTTTCCG
. : . : . : . : . : . :
JMFS133G05+ GCCTCTCAGAACTAGTATCAGAAATCAAATCACTGGTATTGGATAAGGAAGAGTCGGGAG
JMFS086H12+ GCCTCTCAGAACTAGTATCAGAAATCAAATCACTGGTATTGGATAAGGAAGAGTCGGGAG
JMFS098D05+ GCCTCTCAGAACTAGTATCAGAAATCAAATCACTGGTATTGGATAAGGAAGAGTCGGGAG
JMFS096E08+ GCCTCTCAGAACTAGTATCAGAAATCAAATCACTGGTATTGGATAAGGAAGAGTCGGGAG
JMFF051M05+ GCCTCTCAGAACTAGTATCAGAAATCAAATCATGGGTATTGGATAAGGAAGAGTCGGGAG
JMFS161A09+ GCCTCTCAGAACTAGTATCAGAAATCAAATCACTGGTATTGGATAAGGAAGAGTCGGGAG
JMFS149A11+ GCCTCTCAGAACTAGTATCAGAAATCAAATCACTGGTATTGGATAAGGAAGAGTCGGGAG
JMFS001A07+ GCCTCTCAGAACTAGTATCAGAAATCAAATCACTGGTATTGGATAAGGAAGAGTCGGGAG
JMFS102H04+ GCCTCTCAGAACTAGTATCAGAAATCAAATCACTGGTATTGGATAAGGAAGAGTCGGGAG
____________________________________________________________
consensus GCCTCTCAGAACTAGTATCAGAAATCAAATCACTGGTATTGGATAAGGAAGAGTCGGGAG
. : . : . : . : . : . :
JMFS133G05+ ACGAATTCACATTGTCAGGACGGAATGCGCAGCTGAAAGTCAATCTAAGGTGGCGGGAAA
JMFS086H12+ ACGAATTCACATTGTCAGGACGGAATGCGCAGCTGAAAGTCAATCTAAGGTGGCGGGAAA
JMFS098D05+ ACGAATTCACATTGTCAGGACGGAATGCGCAGCTGAAAGTCAATCTAAGGTGGCGGGAAA
JMFS096E08+ ACGAATTCACATTGTCAGGACGGAATGCGCAGCTGAAAGTCAATCTAAGGTGGCGGGAAA
JMFF051M05+ ACGAATTCACATTGTCAGGACGGAGTGCGCAGCTGAAAGTCAATCTAAGGTGGCGGGAAA
JMFS161A09+ ACGAATTCACATTGTCAGGACGGAATGCGCAGCTGAAAGTCAATCTAAGGTGGCGGGAAA
JMFS149A11+ ACGAATTCACATTGTCAGGACGGAATGCGCAGCTGAAAGTCAATCTAAGGTGGCGGGAAA
JMFS001A07+ ACGAATTCACATTGTCAGGACGGAATGCGCAGCTGAAAGTCAATCTAAGGTGGCGGGAAA
JMFS102H04+ ACGAATTCACATTGTCAGGACGGAATGCGCAGCTGAAAGTCAATCTAAGGTGGCGGGAAA
____________________________________________________________
consensus ACGAATTCACATTGTCAGGACGGAATGCGCAGCTGAAAGTCAATCTAAGGTGGCGGGAAA
. : . : . : . : . : . :
JMFS133G05+ CCCGAGGCCTCACAGAAAGTCCGAGGCGGCGCTTGGAAGAGGAAGAAGAAGAGGAGGAGA
JMFS086H12+ CCCGAGGCCTCACAGAAAGTCCGAGGCGGCGCTTGGAAGAGGAAGAAGAAGAGGAGGAGA
JMFS098D05+ CCCGAGGCCTCACAGAAAGTCCGAGGCGGCGCTTGGAAGAGGAAGAAGAAGAGGAGGAGA
JMFS096E08+ CCCGAGGCCTCACAGAAAGTCCGAGGCGGCGCTTGGAAGAGGAAGAAGAAGAGGAGGAGA
JMFF051M05+ CCCGAGGCCTCACAGAAAGTCCGAGGCGGCGCTTGGAAGAGGAAGAAGAAGAGGAGGAGA
JMFS161A09+ CACGAGGCCTCACAGAAAGTCCGAGGCGGCGCTTGGAAGAGGAAGAAGAAGAGGAGGAGA
JMFS149A11+ CCCGAGGCCTCACAGAAAGTCCGAGGCGGCGCTTGGAAGAGGAAGAAGAAGAGGAGGAGA
JMFS001A07+ CCCGAGGCCTCACAGAAAGTCCGAGGCGGCGCTTGGAAGAGGAAGAAGAAGAGGAGGAGA
JMFS102H04+ CCCGAGGCCTCACAGAAAGTCCGAGGCGGCGCTTGGAAGAGGAAGAAGAAGAGGAGGAGA
____________________________________________________________
consensus CCCGAGGCCTCACAGAAAGTCCGAGGCGGCGCTTGGAAGAGGAAGAAGAAGAGGAGGAGA
. : . : . : . : . : . :
JMFS133G05+ AAGAAGACGATAGAGATAAAGGCTTGAATATAAGGGAAGCTTGCAGGGCAGTCGCAGTCA
JMFS086H12+ AAGAAGACGATAGAGATAAAGGCTTGAATATAAGGGAAGCTTGCAGGGCAGTCGCAGTCA
JMFS098D05+ AAGAAGACGATAGAGATAAAGGCTTGAATATAAGGGAAGCTTGCAGGGCAGTCGCAGTCA
JMFS096E08+ AAGAAGACGATAGAGATAAAGGCTTGAATATAAGGGAAGCTTGCAGGGCAGTCGCAGTCA
JMFF051M05+ AAGAAGACGATAGAGATAAAGGCTTGAATATAAGGGAAGCTTGCAGGGCAGTCGCGGTCA
JMFS161A09+ AAGAAGACGATAGAGATAAAGGCTTGAATATAAGGGAAGCTTGCAGGGCAGTCGCAGTCA
JMFS149A11+ AAGAAGACGATAGAGATAAAGGCTTGAATATAAGGGAAGCTTGCAGGGCAGTCGCAGTCA
JMFS001A07+ AAGAAGACGATAGAGATAAAGGCTTGAATATAAGGGAAGCTTGCAGGGCAGTCGCAGTCA
JMFS102H04+ AAGAAGACGATAGAGATAAAGGCTTGAATATAAGGGAAGCTTGCAGGGCAGTCGCAGTCA
____________________________________________________________
consensus AAGAAGACGATAGAGATAAAGGCTTGAATATAAGGGAAGCTTGCAGGGCAGTCGCAGTCA
. : . : . : . : . : . :
JMFS133G05+ TTGGATTTCAATGGCGGATTTGGGA
JMFS086H12+ TTGGATTTCAATGGCGGATTTGGGATTGGATTAGATTGGAATCGACGGGAAAAAAAAAAA
JMFS098D05+ TTGGATTTCAATGGCGGATTTGGGATTGGATTAGATTGGAATCGACGGGAAAAAAAAAAA
JMFS096E08+ TTGGATTTCAATGGCGGATTTGGGATTGGATTAGATTGGAATCGACGGG--AAAAAAAAA
JMFF051M05+ TTGGATTTCAATTGCGGATTTGGGATTGGATTAGATTGGAATCGACGGG-AAAAAAAAAA
JMFS161A09+ TTGGATTTCAATGGCGGATTTGGGATTGGATTAGATTGGAATCGACGGG--AAAAAAAAA
JMFS149A11+ TTGGATTTCAATGGCGGATTTGGGATTGGATTAGATTGGAATCGACGGG--AAAAAAAAA
JMSF045A04+ AAAAAAAA
JMFS001A07+ TTGGATTTCAATGGCGGATTTGGGATTGGATTAGATTGGAATCGACGGG-AAAAAAAAAA
JMFS102H04+ TTGGATTTCAATGGCGGATTTGGGATTGGATTAGATTGGAATCGACGGG--AAAAAAAAA
JMSF019G13+ AAAAAAAA
JMSF040L02+ AAAAAAAA
____________________________________________________________
consensus TTGGATTTCAATGGCGGATTTGGGATTGGATTAGATTGGAATCGACGGG-AAAAAAAAAA
. : . : . : . : . : . :
JMFS086H12+ AAAAAAGAATAAAAGAGAAAGGAGAGACAGATTCTCTCTCTCTCTATGTGTTG
JMFS098D05+ AAAAAAGAATAAAAGAGAAAGGAGAGACAGATTCTCTCTCTCTCTATGTGTTGCCCTTGC
JMFS096E08+ AAAAAAGAATAAAAGAGAAAGGAGAGACAGATTCTCTCTCTCTCTATGTGTTGCCCTTGC
JMFF051M05+ AAAAAAGAATAAAAGAGAAAGGAGAGACAGATTCTCTCTCTCTCTATGTGTTGCCCTTGC
JMFS161A09+ AAAAAAGAATAAAAGAGAAAGGAGAGACAGATTCTCTCTCTCTCTATGTGTTGCCCTTGC
JMFS149A11+ AAAAAAGAATAAAAGAGAAAGGAGAGACAGATTCTCTCTCTCTCTATGTGTTGCCCTTGC
JMSF045A04+ AAAAAAGAATAAAAGAGAAAGGAGAGACAGATTCTCTCTCTCTCTATGTGTTGCCCTTGC
JMFS001A07+ AAAAAAGAATAAAAGAGAAAGGAGAGACAGATTCTCTCTCTCTCTATGTGTTGCCCTTGC
JMFS102H04+ AAAAAAGAATAAAAGAGAAAGGAGAGACAGATTCTCTCTCTCTCTATGTGTTGCCCTTGC
JMSF019G13+ AAAAAAGAATAAAAGAGAAAGGAGAGACAGATTCTCTCTCTCTCTATGTGTTGCCCTTGC
JMSF040L02+ AAAAAAGAATAAAAGAGAAAGGAGAGACAGATTCTCTCTCTCTCTATGTGTTGCCCTTGC
____________________________________________________________
consensus AAAAAAGAATAAAAGAGAAAGGAGAGACAGATTCTCTCTCTCTCTATGTGTTGCCCTTGC
. : . : . : . : . : . :
JMFS098D05+ CGAGCGAACAAGTCAGAAC
JMFS096E08+ CGAGCGAACAAGTCAGAACACAGTAATCAGAT
JMFF051M05+ CGAGCGTACAAGTCAGAACACAGTAATCAGATTCCTTGCTCGCTCCCTTCCCCCTTCTCA
JMFS161A09+ CGAGCGAACAAGTCAGAACACAGTAATCAGATTCCTTGCTCGCTCCCTTCCCCCTTCTCA
JMFS149A11+ CGAGCGAACAAGTCAGAACACAGTAATCAGATTCCTTGCTCGCTCCCTTCCCCCTTCTCA
JMSF045A04+ CGAGCGAACAAGTCAGAACACAGTAATCAGATTCCTTGCTCGCTCCCTTCCCCCTTCTCA
JMFS001A07+ CGAGCGAACAAGTCAGAACACAGTAATCAGATTCCTTGCTCGCTCCCTTCCCCCTTCTCA
JMFS102H04+ CGAGCGAACAAGTCAGAACACAGTAATCAGATTCCTTGCTCGCTCCCTTCCCCCTTCTCA
JMSF019G13+ CGAGCGAACAAGTCAGAACACAGTAATCAGATTCCTTGCTCGCTCCCTTCCCCCTTCTCA
JMSF040L02+ CGAGCGAACAAGTCAGAACACAGTAATCAGATTCCTTGCTCGCTCCCTTCCCCCTTCTCA
____________________________________________________________
consensus CGAGCGAACAAGTCAGAACACAGTAATCAGATTCCTTGCTCGCTCCCTTCCCCCTTCTCA
. : . : . : . : . : . :
JMFF051M05+ GTTTGCACTTTGCACTTCGGCAGAGCAGAGAGAGAGGGGAAGCGTGT
JMFS161A09+ GTTTGCACTTTGCACTTCTGCAGAGCAGAGAGAGAGGGGAAG
JMFS149A11+ GTTTGCACTTTGCACTTCTGCAGAGCAGAGAGAGAGGGGAAGCGTGTGA
JMSF045A04+ GTTTGCACTTTGCACTTCTGCAGAGCAGAGAGAGAGGGGAAGCGTGT
JMFS001A07+ GTTTGCACTTTGCACTTCTGCAGAGCAGAGAGAGAGGGGAAGCGTGT
JMFS102H04+ GTTTGCACTTTGCACTTCTGCAGAGCAGAAAGAGAGGGGAAGCGTGTGA
JMSF019G13+ GTTTGCACTTTGCACTTCTGCAGAGCAGAGAGAGAGGGGAAGCGTGTGAGAGT
JMSF040L02+ GTTTGCACTTTGCACTTCTGCAGAGCAGAGAGAGAGGGGAAGCGTGTGAGAGTGTTGGCC
____________________________________________________________
consensus GTTTGCACTTTGCACTTCTGCAGAGCAGAGAGAGAGGGGAAGCGTGTGAGAGTGTTGGCC