clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF004A06 | Sequence | 578 | 003823 (14) | ref|XP_011072734.1| | 1e-81 | PREDICTED: uncharacterized protein At1g04910-like [Sesamum indicum] | 747 | 011446 (13) | ref|XP_010322803.1| | 3e-77 | PREDICTED: uncharacterized protein At1g04910-like isoform X2 [Solanum lycopersi |
JMFF006E06 | Sequence | 557 | 003823 (14) | ref|XP_011072734.1| | 7e-64 | PREDICTED: uncharacterized protein At1g04910-like [Sesamum indicum] | 775 | 011446 (13) | ref|XP_010322803.1| | 7e-77 | PREDICTED: uncharacterized protein At1g04910-like isoform X2 [Solanum lycopersi |
JMFF008K24 | Sequence | 517 | 003823 (14) | ref|XP_011072734.1| | 5e-55 | PREDICTED: uncharacterized protein At1g04910-like [Sesamum indicum] | 620 | 011446 (13) | ref|XP_010322803.1| | 1e-62 | PREDICTED: uncharacterized protein At1g04910-like isoform X2 [Solanum lycopersi |
JMFF014D09 | Sequence | 558 | 003823 (14) | ref|XP_011072734.1| | 6e-64 | PREDICTED: uncharacterized protein At1g04910-like [Sesamum indicum] | 848 | 011446 (13) | gb|KDP34445.1| | 1e-76 | hypothetical protein JCGZ_11916 [Jatropha curcas] |
JMFF018L13 | Sequence | 558 | 003823 (14) | ref|XP_011072734.1| | 7e-64 | PREDICTED: uncharacterized protein At1g04910-like [Sesamum indicum] | 705 | 011446 (13) | ref|XP_004241868.1| | 9e-58 | PREDICTED: uncharacterized protein At1g04910-like isoform X1 [Solanum lycopersi |
JMFF031J21 | Sequence | 139 | 003823 (14) | 285 | 011446 (13) | ref|XP_004241868.1| | 5e-05 | PREDICTED: uncharacterized protein At1g04910-like isoform X1 [Solanum lycopersi | |||
JMFF032E09 | Sequence | 604 | 003823 (14) | ref|XP_011072734.1| | 8e-65 | PREDICTED: uncharacterized protein At1g04910-like [Sesamum indicum] | 702 | 011446 (13) | ref|XP_010322803.1| | 9e-76 | PREDICTED: uncharacterized protein At1g04910-like isoform X2 [Solanum lycopersi |
JMFF033J18 | Sequence | 511 | 003823 (14) | ref|XP_011072734.1| | 2e-53 | PREDICTED: uncharacterized protein At1g04910-like [Sesamum indicum] | 743 | 011446 (13) | ref|XP_010322803.1| | 2e-77 | PREDICTED: uncharacterized protein At1g04910-like isoform X2 [Solanum lycopersi |
JMSF005K03 | Sequence | 355 | 003823 (14) | emb|CDO97753.1| | 2e-23 | unnamed protein product [Coffea canephora] | 324 | 011446 (13) | |||
JMSF012O08 | Sequence | 376 | 003823 (14) | ref|XP_011072734.1| | 2e-05 | PREDICTED: uncharacterized protein At1g04910-like [Sesamum indicum] | 283 | 012116 (41) | gb|AFI25162.1| | 7e-20 | fructose 1,6 bisphosphate aldolase class 1, partial [Moringa oleifera] |
JMSF018N13 | Sequence | 261 | 003823 (14) | emb|CDO97753.1| | 1e-12 | unnamed protein product [Coffea canephora] | 752 | 011446 (13) | ref|XP_010322803.1| | 8e-77 | PREDICTED: uncharacterized protein At1g04910-like isoform X2 [Solanum lycopersi |
JMSF019H07 | Sequence | 257 | 003823 (14) | emb|CDO97753.1| | 1e-12 | unnamed protein product [Coffea canephora] | 749 | 011446 (13) | ref|XP_004241868.1| | 6e-58 | PREDICTED: uncharacterized protein At1g04910-like isoform X1 [Solanum lycopersi |
JMSF040J09 | Sequence | 639 | 003823 (14) | ref|XP_011072734.1| | 5e-76 | PREDICTED: uncharacterized protein At1g04910-like [Sesamum indicum] | 874 | 011446 (13) | ref|XP_004241868.1| | 1e-95 | PREDICTED: uncharacterized protein At1g04910-like isoform X1 [Solanum lycopersi |
JMSF052N18 | Sequence | 649 | 003823 (14) | ref|XP_011072734.1| | 9e-65 | PREDICTED: uncharacterized protein At1g04910-like [Sesamum indicum] | 873 | 011446 (13) | ref|XP_010322803.1| | 4e-95 | PREDICTED: uncharacterized protein At1g04910-like isoform X2 [Solanum lycopersi |
This contig is upended
. : . : . : . : . : . :
JMFF004A06+ TTC
JMSF052N18+ TCGGCTCAATATTTTCTGCAATATGCTCTTC
____________________________________________________________
consensus TCGGCTCAATATTTTCTGCAATATGCTCTTC
. : . : . : . : . : . :
JMFF004A06+ AGTAACCCTATTTGGAACCTTCACTACCGCAAGGTTTTTTGAAGAGAGCACAGTGGGCTC
JMFF014D09+ TTTTTGAAGAGAGCACAGTGGGCTC
JMSF052N18+ AGTAACCCTATTTGGAACCTTCACTACCGCAAGGTTTTTTGAAGAGAGCACAGTGGGCTC
JMFF032E09+ GAAGAGAGCACAGTGGGCTC
JMSF040J09+ TTTTTGAAGAGAGCACAGTGGGCTC
____________________________________________________________
consensus AGTAACCCTATTTGGAACCTTCACTACCGCAAGGTTTTTTGAAGAGAGCACAGTGGGCTC
. : . : . : . : . : . :
JMFF004A06+ AGATGCTGTGACTTTGACCACTCCAT-CCAGGCTTTTAACAAACTGATCAACATCATAAA
JMFF014D09+ AGATGCTGTGACTTTGACCACTCCATCCCAGGCTTTTAACAAACTGATCAACATCATAAA
JMSF052N18+ AGATGCTGTGACTTTGACCACTCCAT-CCAGGCTTTTAACAAACTGATCAACAT-ATAAA
JMFF032E09+ AGATGCTGTGACTTTGACCACTCCATCCCAGGCTTTTAACAAACTGATCAACATCATAAA
JMFF006E06+ AACAAACTGATCAACATCATAAA
JMFF018L13+ TAACAAACTGATCAACATCATAAA
JMSF040J09+ AGATGCTGTGACTTTGACCACTCCAT-CCAGGCTTTTAACAAACTGATCAACATCATAAA
____________________________________________________________
consensus AGATGCTGTGACTTTGACCACTCCAT-CCAGGCTTTTAACAAACTGATCAACATCATAAA
. : . : . : . : . : . :
JMFF004A06+ TGTCTTTGAAGTCTCTCTTATCACCAGGATTGCTTCCCCTAACATCTGGGATCACAAGAG
JMFF014D09+ TGTCTTTGAAGTCTCTCTTATCACCAGGATTGCTTCCCCTAACATCTGGGATCACAAGAG
JMSF052N18+ TGTCTTTGAAGTCTCTCTTATCACCAGGATTGCTTCCCCTAACATCTGGGATCACAAGAG
JMFF032E09+ TGTCTTTGAAGTCTCTCTTATCACCAGGATTGCTTCCCCTAACATCTGGGATCACAAGAG
JMFF008K24+ TTATCACCAGGATTGCTTCCCCTAACATCTGGGATCACAAGAG
JMFF033J18+ CCAGGATTGCTTCCCCTAACATCTGGGATCACAAGAG
JMFF006E06+ TGTCTTTGAAGTCTCTCTTATCACCAGGATTGCTTCCCCTAACATCTGGGATCACAAGAG
JMFF018L13+ TGTCTTTGAAGTCTCTCTTATCACCAGGATTGCTTCCCCTAACATCTGGGATCACAAGAG
JMSF040J09+ TGTCTTTGAAGTCTCTCTTATCACCAGGATTGCTTCCCCTAACATCTGGGATCACAAGAG
____________________________________________________________
consensus TGTCTTTGAAGTCTCTCTTATCACCAGGATTGCTTCCCCTAACATCTGGGATCACAAGAG
. : . : . : . : . : . :
JMFF004A06+ TTGCACGTAGATATCTTGCCACTACTACTGCATCAGAAATCTGTGAGACATGATACTCGG
JMFF014D09+ TTGCACGTAGATATCTTGCCACTACTACTGCATCAGAAATCTGTGAGACATGATACTCGG
JMSF052N18+ TTGCACGTAGATATCTTGCCACTACTACTGCATCAGAAATCTGTGAGACATGATACTCGG
JMFF032E09+ TTGCACGTAGATATCTTGCCACTACTACTGCATCAGAAATCTGTGAGACATGATACTCGG
JMFF008K24+ TTGCACGTAGATATCTTGCCACTACTACTGCATCAGAAATCTGTGAGACATGATACTCGG
JMFF033J18+ TTGCACGTAGATATCTTGCCACTACTACTGCATCAGAAATCTGTGAGACATGATACTCGG
JMFF006E06+ TTGCACGTAGATATCTTGCCACTACTACTGCATCAGAAATCTGTGAGACATGATACTCGG
JMFF018L13+ TTGCACGTAGATATCTTGCCACTACTACTGCATCAGAAATCTGTGAGACATGATACTCGG
JMSF040J09+ TTGCACGTAGATATCTTGCCACTACTACTGCATCAGAAATCTGTGAGACATGATACTCGG
____________________________________________________________
consensus TTGCACGTAGATATCTTGCCACTACTACTGCATCAGAAATCTGTGAGACATGATACTCGG
. : . : . : . : . : . :
JMFF004A06+ GACCATTGGTCAGCGAGAAGGTCACATATCCATTTGATAAATCTCCATCAGCCAGGGATG
JMFF014D09+ GACCATTGGTCAGCGAGAAGGTCACATATCCATTTGATAAATCTCCATCAGCCAGGGATG
JMSF052N18+ GACCATTGGTCAGCGAGAAGGTCACATATCCATTTGATAAATCTCCATCAGCCAGGGATG
JMFF032E09+ GACCATTGGTCAGCGAGAAGGTCACATATCCATTTGATAAATCTCCATCAGCCAGGGATG
JMFF008K24+ GACCATTGGTCAGCGAGAAGGTCACATATCCATTTGATAAATCTCCATCAGCCAGGGATG
JMFF033J18+ GACCATTGGTCAGCGAGAAGGTCACATATCCATTTGATAAATCTCCATCAGCCAGGGATG
JMSF012O08+ CCATCAGCCAGGGATG
JMFF006E06+ GACCATTGGTCAGCGAGAAGGTCACATATCCATTTGATAAATCTCCATCAGCCAGGGATG
JMFF018L13+ GACCATTGGTCAGCGAGAAGGTCACATATCCATTTGATAAATCTCCATCAGCCAGGGATG
JMSF040J09+ GACCATTGGTCAGCGAGAAGGTCACATATCCATTTGATAAATCTCCATCAGCCAGGGATG
____________________________________________________________
consensus GACCATTGGTCAGCGAGAAGGTCACATATCCATTTGATAAATCTCCATCAGCCAGGGATG
. : . : . : . : . : . :
JMFF004A06+ GTCTTTCCCAGCAAGGCTTCATGGATAAACCATCACCTTTCCAAAGACTATCTCCCCCAG
JMFF014D09+ GTCTTTCCCAGCAAGGCTTCATGGATAAACCATCACCTTTCCAAAGACTATCTCCCCCAG
JMSF052N18+ GTCTTTCCCAGCAAGGCTTCATGGATAAACCATCACCTTTCCAAAGACTATCTCCCCCAG
JMFF032E09+ GTCTTTCCCAGCAAGGCTTCATGGATAAACCATCACCTTTCCAAAGACTATCTCCCCCAG
JMFF008K24+ GTCTTTCCCAGCAAGGCTTCATGGATAAACCATCACCTTTCCAAAGACTATCTCCCCCAG
JMFF033J18+ GTCTTTCCCAGCAAGGCTTCATGGATAAACCATCACCTTTCCAAAGACTATCTCCCCCAG
JMSF012O08+ GTCTTTCCCAGCAAGGCTTCATGGATAAACCATCACCTTTCCAAAGACTATCTCCCCCAG
JMFF006E06+ GTCTTTCCCAGCAAGGCTTCATGGATAAACCATCACCTTTCCAAAGACTATCTCCCCCAG
JMFF018L13+ GTCTTTCCCAGCAAGGCTTCATGGATAAACCATCACCTTTCCAAAGACTATCTCCCCCAG
JMSF005K03+ TCCCAGCAGGGCTTCATGGATAAACCATCACCTTTCCAAAGACTATCTCCCCCAG
JMSF040J09+ GTCTTTCCCAGCAAGGCTTCATGGATAAACCATCACCTTTCCAAAGACTATCTCCCCCAG
____________________________________________________________
consensus GTCTTTCCCAGCAAGGCTTCATGGATAAACCATCACCTTTCCAAAGACTATCTCCCCCAG
. : . : . : . : . : . :
JMFF004A06+ GAAGTGAAAGCTCTGAAGCTTTGTTAGTATCATGAATAGTTGAAGTCAAGCGGCTCTCCT
JMFF014D09+ GAAGTGAAAGCTCTGAAGCTTTGTTAGTATCATGAATAGTTGAAGTCAAGCGGCTCTCCT
JMSF052N18+ GAAGTGAAAGCTCTGAAGCTTTGTTAGTATCATGAATAGTTGAAGTCAAGCGGCTCTCCT
JMFF032E09+ GAAGTGAAAGCTCTGAAGCTTTGTTAGTATCATGAATAGTTGAAGTCAAGCGGCTCTCCT
JMFF008K24+ GAAGTGAAAGCTCTGAAGCTTTGTTAGTATCATGAATAGTTGAAGTCAAGCGGCTCTCCT
JMFF033J18+ GAAGTGAAAGCTCTGAAGCTTTGTTAGTATCATGAATAGTTGAAGTCAAGCGGCTCTCCT
JMSF018N13+ CATGAATAGTTGAAGTCAAGCGGCTCTCCT
JMSF012O08+ GAAGTGAAAGCTCTGAAGCTTTGTTAGTATCATGAATAGTTGAAGTCAAGCGGCTCTCCT
JMFF006E06+ GAAGTGAAAGCTCTGAAGCTTTGTTAGTATCATGAATAGTTGAAGTCAAGCGGCTCTCCT
JMFF018L13+ GAAGTGAAAGCTCTGAAGCTTTGTTAGTATCATGAATAGTTGAAGTCAAGCGGCTCTCCT
JMSF005K03+ GAAGTGAAAGCTCTGAAGCTTTGTTAGTATCATGAATAGTTGAAGTCAAGCGGCTCTCCT
JMSF019H07+ AGTCAAGCGGCTCTCCT
JMSF040J09+ GAAGTGAAAGCTCTGAAGCTTTGTTAGTATCATGAATAGTTGAAGTCAAGCGGCTCTCCT
____________________________________________________________
consensus GAAGTGAAAGCTCTGAAGCTTTGTTAGTATCATGAATAGTTGAAGTCAAGCGGCTCTCCT
. : . : . : . : . : . :
JMFF004A06+ GGAGAGTATCGAAGTGGCCTCGCTTGATCATGTTCCCCAGCATTACAAACATTGTAACAG
JMFF014D09+ GGAGAGTATCGAAGTGGCCTCGCTTGATCATGTTCCCCAGCATTACAAACATTGTAACAG
JMSF052N18+ GGAGAGTATCGAAGTGGTCTCGCTTGATCATGTTCCCCAGCATTACAAACATTGTAACAG
JMFF032E09+ GGAGAGTATCGAAGTGGTCTCGCTTGATCATGTTCCCCAGCATTACAAACATTGTAACAG
JMFF008K24+ GGAGAGTATCGAAGTGGTCTCGCTTGATCATGTTCCCCAGCATTACAAACATTGTAACAG
JMFF033J18+ GGAGAGTATCGAAGTGGTCTCGCTTGATCATGTTCCCCAGCATTACAAACATTGTAACAG
JMSF018N13+ GGAGAGTATCGAAGTGGTCTCGCTTGATCATGTTCCCCAGCATTACAAACATTGTAACAG
JMSF012O08+ G
JMFF006E06+ GGAGAGTATCGAAGTGGTCTCGCTTGATCATGTTCCCCAGCATTACAAACATTGTAACAG
JMFF018L13+ GGAGAGTATCGAAGTGGTCTCGCTTGATCATGTTCCCCAGCATTACAAACATTGTAACAG
JMSF005K03+ GGAGAGTATCGAAGTGGTCTCGCTTGATCATGTTCCCCAGCATTACAAACATTGTAACAG
JMSF019H07+ GGAGAGTATCGAAGTGGTCTCGCTTGATCATGTTCCCCAGCATTACAAACATTGTAACAG
JMSF040J09+ GGAGAGTATCGAAGTGGTCTCGCTTGATCATGTTCCCCAGCATTACAAACATTGTAACAG
____________________________________________________________
consensus GGAGAGTATCGAAGTGGTCTCGCTTGATCATGTTCCCCAGCATTACAAACATTGTAACAG
. : . : . : . : . : . :
JMFF004A06+ TGAGCACTCCGGCCACAATCTGTCTCGGATCCACCGCCATTTCTTCAGATCCAAAATCTC
JMFF014D09+ TGAGCACTCCGGCCACAATCTGTCTCGGATCCACCGCCATTTCTTCAGATCCAAAATCTC
JMSF052N18+ TGAGCACTCCGGCCACAATCTGTCTCGGATCCACCGCCATTTCTTCAGATCCAAAATCTC
JMFF032E09+ TGAGCACTCCGGCCACAATCTGTCTCGGATCCACCGCCATTTCTTCAGATCCAAAATCTC
JMFF031J21+ TGAGCACTCCGGCCACAATCTGTCTNGGATCCACCGCCATTTCTTCAGATCCAAAATCTC
JMFF008K24+ TGAGCACTCCGGCCACAATCTGTCTCGGATCCACCGCCATTTCTTCAGATCCAAAATCTC
JMFF033J18+ TGAGCACTCCGGCCACAATCTGTCTCGGATCCACCGCCATTTCTTCAGATCCAAAATCTC
JMSF018N13+ TGAGCACTCCGGCCACAATCTGTCTCGGATCCACCGCCATTTCTTCAGATCCAAAATCTC
JMFF006E06+ TGAGCACTCCGGCCACAATCTGTCTCGGATCCACCGCCATTTCTTCAGATCCAAAATCTC
JMFF018L13+ TGAGCACTCCGGCCACAATCTGTCTCGGATCCACCGCCATTTCTTCAGATCCAAAATCTC
JMSF005K03+ TGAGCACTCCGGCCACAATCTGTCTCGGATCCACCGCCATTTCTTCAGATCCAAAATCTC
JMSF019H07+ TGAGCACTCCGGCCACAATCTGTCTCGGATCCACCGCCATTTCTTCAGATCCAAAATCTC
JMSF040J09+ TGAGCACTCCGGCCACAATCTGTCTCGGATCCACCGCCATTTCTTCAGATCCAAAATCTC
____________________________________________________________
consensus TGAGCACTCCGGCCACAATCTGTCTCGGATCCACCGCCATTTCTTCAGATCCAAAATCTC
. : . : . : . : . : . :
JMFF004A06+ TCTCCTGCTTTCACTGTATCAAAGAATCACGTTCTT
JMFF014D09+ TCTCCTGCTTTCACTGTATCAAAGAATCACGTTCTT
JMSF052N18+ TCTCCTGCTTTCACTGTATCAAAGAACCACCTTCTTCTCTCTGTGTATAGAGAGAGATTG
JMFF032E09+ TCTCCTGCTTTCACTGTATCAAAGAACCACCTTCTTCTCTCTGTGTATAGAGAGAGATTG
JMFF031J21+ TCTCCTGCTTTCACTGTATCAAAGAGCCACCTTCTTCTCTCTGTGTATAGAGAGAGATTG
JMFF008K24+ TCTCCTGCTTTCACTGTATCAAAGAACCACCTTCTTCTCTCTGTGTATAGAGAGAGATTG
JMFF033J18+ TCTCCTGCTTTCACTGTATCAAAGAACCACCTTCTTCTCTCTGTGTATAGAGAGAGATTG
JMSF018N13+ TCTCCTGCTTTCACTGTATCAAAGAACCACCTTCTTCTCTCTGTGTATAGAGAGAGATTG
JMFF006E06+ TCTCCTGCTTTCACTGTATCAAAGAACCACCTTCTTCTCTCTGTGTATAGAGAGAGATTG
JMFF018L13+ TCTCCTGCTTTCACTGTATCAAAGAACCACCTTCTTCTCTCTGTGTATAGAGAGAGATTG
JMSF005K03+ TCTCCTGCTTTCACTGTATCAAAGAACCACCTTCTTCTCTCTGTGTATAGAGAGAGATTG
JMSF019H07+ TCTCCTGCTTTCACTGTATCAAAGAACCACCTTCTTCTCTCTGTGTATAGAGAGAGATTG
JMSF040J09+ TCTCCTGCTTTCACTGTATCAAGGAACCACCTTCTTCTCTCTGTGTATAGAGAGAGATTG
____________________________________________________________
consensus TCTCCTGCTTTCACTGTATCAAAGAACCACCTTCTTCTCTCTGTGTATAGAGAGAGATTG
. : . : . : . : . : . :
JMSF052N18+ AGAAGAGAGAAAGAGGCGC
JMFF032E09+ AGAAGAGAGAAAGAGGCGCAGCTCACACCTTAGCTTTCTTGGCT
JMFF031J21+ AGAAGAGAGAAAGAGGCG
JMFF008K24+ AGAAGAGAGAAAGAGGCGCAGCTCACACCTTAGCTTTCTTGGCTACTTGTAATT
JMFF033J18+ AGAAGAGAGAAAGAGGCGCAGCTCACACCTTAGCTTTCTTGGCTACTTGTAATT
JMSF018N13+ AGAAGAGAGAAAGAGGCGCAGCTCACACCTTAGCTTTCTTGGCTACTTGT
JMFF006E06+ AGAAGAGAGAAAGAGGCGCAGCTCACACCTTAGCTTTCTTGGCTACTTGTAATT
JMFF018L13+ AGAAGAGAGAAAGAGGCGCAGCTCACACCTTAGCTTTCTTGGCTACTGGTAATT
JMSF005K03+ AGAAGAGAGAAAGAGGCGCAGCTCACACCTTAGCTTTCTTGGCTACTTGTAATT
JMSF019H07+ AGAAGAGAGAAAGAGGCGCAGCTCACACCTTAGCTTTCTTGGCTACTTGTAATT
JMSF040J09+ AGAAGAGAGAAAGAGGCGCAGCTCACACCTTAGCTTTCTTGGCTACTTGTAATTAAGCCC
____________________________________________________________
consensus AGAAGAGAGAAAGAGGCGCAGCTCACACCTTAGCTTTCTTGGCTACTTGTAATTAAGCCC