Contig 003822:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS033H06Sequence539003822 (3)ref|XP_009788802.1|196PREDICTED: uncharacterized protein LOC104236559 [Nicotiana sylvestris]
JMSF017N18Sequence498003822 (3)ref|XP_009609133.1|230PREDICTED: uncharacterized protein LOC104102979 [Nicotiana tomentosiformis]755002822 (2)ref|XP_009788802.1|182PREDICTED: uncharacterized protein LOC104236559 [Nicotiana sylvestris]
JMSF040I20Sequence665003822 (3)ref|XP_009609133.1|246PREDICTED: uncharacterized protein LOC104102979 [Nicotiana tomentosiformis]875002822 (2)ref|XP_009788802.1|231PREDICTED: uncharacterized protein LOC104236559 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFS033H06+                 AGGGTTATGTATCAAATGGAAAGCTTATGTTAGCAATGGCTGCACTCTGCACTC
JMSF040I20+                                                                  CACTC
                      ____________________________________________________________
consensus                   AGGGTTATGTATCAAATGGAAAGCTTATGTTAGCAATGGCTGCACTCTGCACTC
 
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JMFS033H06+           ATCAAATTGAAATAGGGAAATGCCCAAACACCATAAGTAAGCATTTGCATAATTTTAGGT
JMSF040I20+           ATCAAATTGAAATAGGGAAATGCCCAAACACCATAAGTAAGCATTTGCATAATTTTAGGT
                      ____________________________________________________________
consensus             ATCAAATTGAAATAGGGAAATGCCCAAACACCATAAGTAAGCATTTGCATAATTTTAGGT
 
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JMFS033H06+           GATTGGGTGAGAATAAAACCTTCATAATACCAACCACAGTCCCTCTATGTCTGGGGAAAT
JMSF040I20+           GATTGGGTGAGAATCAAACCTTCATAATACCAACCACAGTCCCTCTATGTCTGGGGAAAT
                      ____________________________________________________________
consensus             GATTGGGTGAGAATCAAACCTTCATAATACCAACCACAGTCCCTCTATGTCTGGGGAAAT
 
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JMFS033H06+           TATGAACCGCAGTAACAACATTAGCGGTGTTGAAGAAGGTGGTGGCCTGAGCGGCAAGGA
JMSF017N18+                                 AGCGGTGTTGAAGAAGGTGGTGGCCTGAGCGGCAAGGA
JMSF040I20+           TATGAACCGCAGTAACAACATTAGCGGTGTTGAAGAAGGTGGTGGCCTGAGCGGCAAGGA
                      ____________________________________________________________
consensus             TATGAACCGCAGTAACAACATTAGCGGTGTTGAAGAAGGTGGTGGCCTGAGCGGCAAGGA
 
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JMFS033H06+           GCATGTAGAGGCACATGACAAGCACGTGGGGTGCGGGCAGCAAACCCACGACGGTCAACC
JMSF017N18+           GCATGTAGAGGCACATGACAAGCACGTGGGGTGCGGGCAGCAAACCCACGACGGTCAACC
JMSF040I20+           GCATGTAGAGGCACATGACAAGCACGTGGGGTGCGGGCAGCAAACCCACGACGGTCAACC
                      ____________________________________________________________
consensus             GCATGTAGAGGCACATGACAAGCACGTGGGGTGCGGGCAGCAAACCCACGACGGTCAACC
 
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JMFS033H06+           ACATGAGGAAGTAGCCGGCGAAGCATAGAAGCGCGCCGACCAAGAGCACCACCCAGGGGC
JMSF017N18+           ACATGAGGAAGTAGCCGGCGAAGCATAGAAGCGCGCCGACCAAGAGCACCACCCAGGGGC
JMSF040I20+           ACATGAGGAAGTAGCCGGCGAAGCATAGAAGCGCGCCGACCAAGAGCACCACCCAGGGGC
                      ____________________________________________________________
consensus             ACATGAGGAAGTAGCCGGCGAAGCATAGAAGCGCGCCGACCAAGAGCACCACCCAGGGGC
 
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JMFS033H06+           CGCCACCGCAGGCGGCGGAGTAGAGGAGGCCGGAGAGTACGCCGACGTTGGCGCCGAAGT
JMSF017N18+           CGCCACCGCAGGCGGCGGAGTAGAGGAGGCCGGAGAGTACGCCGACGTTGGCGCCGAAGT
JMSF040I20+           CGCCACCGCAGGCGGCGGAGTAGAGGAGGCCGGAGAGTACGCCGACGTTGGCGCCGAAGT
                      ____________________________________________________________
consensus             CGCCACCGCAGGCGGCGGAGTAGAGGAGGCCGGAGAGTACGCCGACGTTGGCGCCGAAGT
 
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JMFS033H06+           CTTTGAAAACGGAAACGGTGTCGAGGGTTGACTGATCATAGGCTTGGGATGATTTCAAGA
JMSF017N18+           CTTTGAAAACGGAAACGGTGTCGAGGGTTGACTGATCATAGGCTTGGGATGATTTCAAGA
JMSF040I20+           CTTTGAAAACGGAAACGGTGTCGAGGGTTGACTGATCATAGGCTTGGGATGATTTCAAGA
                      ____________________________________________________________
consensus             CTTTGAAAACGGAAACGGTGTCGAGGGTTGACTGATCATAGGCTTGGGATGATTTCAAGA
 
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JMFS033H06+           CGGAGGAGTAGATGGCGAAGGTGTAGAGAGAGCCGCTGGTGGATTGAATCCATATGCTGG
JMSF017N18+           CGGAGGAGTAGATGGCGAAGGTGTAGAGAGAGCCGCTGGTGGATTGAATCCATATGCTGG
JMSF040I20+           CGGAGGAGTAGATGGCGAAGGTGTAGAGAGAGCCGCTGGTGGATTGAATCCATATGCTGG
                      ____________________________________________________________
consensus             CGGAGGAGTAGATGGCGAAGGTGTAGAGAGAGCCGCTGGTGGATTGAATCCATATGCTGG
 
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JMFS033H06+           CCACT                                                       
JMSF017N18+           CCACTGTAGCGACCCACTTGCTGTTGATCTTGGTTTTGAATCGAGGGTTGTAATCCGGGT
JMSF040I20+           CCACTGTAGCGACCCACTTGCTGTTGATCTTGGTTTTGAATCGAGGGTTGTAATCCGGGT
                      ____________________________________________________________
consensus             CCACTGTAGCGACCCACTTGCTGTTGATCTTGGTTTTGAATCGAGGGTTGTAATCCGGGT
 
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JMSF017N18+           CTAAATCCATTTCCTTCCTTCTTTTTCGTGATGAAATTATAGTTTCGATTAGCCATTTTA
JMSF040I20+           CTAAATCCATTTCCTTCCTTCTTTTTCGTGATGAAATTATAGTTTCGATTAGCCATTTTA
                      ____________________________________________________________
consensus             CTAAATCCATTTCCTTCCTTCTTTTTCGTGATGAAATTATAGTTTCGATTAGCCATTTTA
 
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JMSF017N18+           GGTTTTATGGAATTGGGAAGAGGAAGAAGCATGGTGCC                      
JMSF040I20+           GGTTTTATGGAATTGGGAAGAGGAAGAAGCATGGTGCCAGGTGCCTTGTCTATGTGAGCC
                      ____________________________________________________________
consensus             GGTTTTATGGAATTGGGAAGAGGAAGAAGCATGGTGCCAGGTGCCTTGTCTATGTGAGCC