Contig 003821:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF040I06+                                            GGGCAGTAAATTAAAGCATTAATATT
JMSF040I06-                                             GGGCAGTAAATTAAAGCATTAATATT
                      ____________________________________________________________
consensus                                               GGGCAGTAAATTAAAGCATTAATATT
 
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rJMSF040I06+          ATTATGTTATAGACTTATAGTGCATGTTTGGACTGAAAATGGCGGTGAAAATCTTCTTGT
JMSF040I06-           ATTATGTTATAGACTTATAGTGCATGTTTGGACTGAAAATGGCGGTGAAAATCTTCTTGT
                      ____________________________________________________________
consensus             ATTATGTTATAGACTTATAGTGCATGTTTGGACTGAAAATGGCGGTGAAAATCTTCTTGT
 
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rJMSF040I06+          TTACATTGCTCTTGCTTTCGGTGACGGTGGATTTGGGTGGTGCCACCAGCCGGGGGATGG
JMSF040I06-           TTACATTGCTCTTGCTTTCGGTGACGGTGGATTTGGGTGGTGCCACCAGCCGGGGGATGG
                      ____________________________________________________________
consensus             TTACATTGCTCTTGCTTTCGGTGACGGTGGATTTGGGTGGTGCCACCAGCCGGGGGATGG
 
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rJMSF040I06+          CGACGGAGAGGCGGTCTGCAGTCGGCATCGCGGAGGCCGCCGGCACCTTATTGGGGCATA
JMSF040I06-           CGACGGAGAGGCGGTCTGCAGTCGGCATCGCGGAGGCCGCCGGCACCTTATTGGGGCATA
                      ____________________________________________________________
consensus             CGACGGAGAGGCGGTCTGCAGTCGGCATCGCGGAGGCCGCCGGCACCTTATTGGGGCATA
 
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rJMSF040I06+          GCTATGGACAGCAGGAGCCCGAGATAAATAATCACCACAATATTCCTAGGGATTCTTGGC
JMSF040I06-           GCTATGGACAGCAGGAGCCCGAGATAAATAATCACCACAATATTCCTAGGGATTCTTGGC
                      ____________________________________________________________
consensus             GCTATGGACAGCAGGAGCCCGAGATAAATAATCACCACAATATTCCTAGGGATTCTTGGC
 
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rJMSF040I06+          CGGAGAATGGTCAAACCCCAACCTCGCCGGCAGCCTTCAAGACCACCACAGAAGAGAACA
JMSF040I06-           CGGAGAATGGTCAAACCCCAACCTCGCCGGCAGCCTTCAAGACCACCACAGAAGAGAACA
                      ____________________________________________________________
consensus             CGGAGAATGGTCAAACCCCAACCTCGCCGGCAGCCTTCAAGACCACCACAGAAGAGAACA
 
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rJMSF040I06+          ACGGCTAGATTTATCCACAGCCATGCATGCATGCAGTACTGCACTGCACGTGTGATGACA
JMSF040I06-           ACGGCTAGATTTATCCACAGCCATGCATGCATGCAGTACTGCACTGCACGTGTGATGACA
                      ____________________________________________________________
consensus             ACGGCTAGATTTATCCACAGCCATGCATGCATGCAGTACTGCACTGCACGTGTGATGACA
 
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rJMSF040I06+          AGTTTGTTGATATATATGTTATATATAGTGTGTATTATTAAACATATTCTAGCTTTGTTA
JMSF040I06-           AGTTTGTTGATATATATGTTATATATAGTGTGTATTATTAAACATATTCTAGCTTTGTTA
                      ____________________________________________________________
consensus             AGTTTGTTGATATATATGTTATATATAGTGTGTATTATTAAACATATTCTAGCTTTGTTA
 
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rJMSF040I06+          AAATGATGTGATTGATATCCTACTACAATATAGTGAAGGTGTGTCATATATGAATAAGTA
JMSF040I06-           AAATGATGTGATTGATATCCTACTACAATATAGTGAAGGTGTGTCATATATGAATAAGTA
                      ____________________________________________________________
consensus             AAATGATGTGATTGATATCCTACTACAATATAGTGAAGGTGTGTCATATATGAATAAGTA
 
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rJMSF040I06+          TTTCTAACTAGTCGCACCAAAAGGTGCAGTGGTTTCTAGATATGTAATTCACTCTTGTAT
JMSF040I06-           TTTCTAACTAGTCGCACCAAAAGGTGCAGTGGTTTCTAGATATGTAATTCACTCTTGTAT
                      ____________________________________________________________
consensus             TTTCTAACTAGTCGCACCAAAAGGTGCAGTGGTTTCTAGATATGTAATTCACTCTTGTAT
 
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rJMSF040I06+          AATCTCTT                                                    
JMSF040I06-           AATCTCTTTCCAGTAACTGTTTTGTTATATATATAGATAATTCTATATTCAAAAAAAAAA
                      ____________________________________________________________
consensus             AATCTCTTTCCAGTAACTGTTTTGTTATATATATAGATAATTCTATATTCAAAAAAAAAA