| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFN011L10 | Sequence | 620 | 003819 (3) | ref|XP_002514732.1| | 5e-66 | rotamase, putative [Ricinus communis] gb|EEF47838.1| rotamase, putative [Ricinus | |||||
| JMSF040D09 | Sequence | 682 | 003819 (3) | ref|XP_002514732.1| | 1e-65 | rotamase, putative [Ricinus communis] gb|EEF47838.1| rotamase, putative [Ricinus | 763 | 003819 (3) | ref|XP_002514732.1| | 3e-65 | rotamase, putative [Ricinus communis] gb|EEF47838.1| rotamase, putative [Ricinus |
This contig is upended
. : . : . : . : . : . :
rJMSF040D09- AGACTCGTATTCTAGACAATCCCATAAAGGTTTTTTTCCCACA
____________________________________________________________
consensus AGACTCGTATTCTAGACAATCCCATAAAGGTTTTTTTCCCACA
. : . : . : . : . : . :
JMFN011L10+ TACCAGATTATATCTTATGGAC
rJMSF040D09- AACATCATTCTGGGGAAATCGCTTCAAGGGAAGAGATTTACCAGATTATATCTTATGGAC
JMSF040D09+ TACCAGATTATATCTTATGGAC
____________________________________________________________
consensus AACATCATTCTGGGGAAATCGCTTCAAGGGAAGAGATTTACCAGATTATATCTTATGGAC
. : . : . : . : . : . :
JMFN011L10+ AACATATGTAAGTAAGAAAGTATGCATAGTCGCAGGCAATGGTGTCTTAAACAGTTATAG
rJMSF040D09- AACATATGTAAGTAAGAAAGTATGCATAGTCGCAGGCAATGGTGTCTTAAACAGTTATAG
JMSF040D09+ AACATATGTAAGTAAGAAAGTATGCATAGTCGCAGGCAATGGTGTCTTAAACAGTTATAG
____________________________________________________________
consensus AACATATGTAAGTAAGAAAGTATGCATAGTCGCAGGCAATGGTGTCTTAAACAGTTATAG
. : . : . : . : . : . :
JMFN011L10+ CATTGAGTATCAGATGGCCAAATACACAAGTATCTCTATTTTTGTGGCTTCCAAAATGAG
rJMSF040D09- CATTGAGTATCAGATGGCCAAATACACAAGTATCTCTATTTTTGTGGCTTCCAAAATGAG
JMSF040D09+ CATTGAGTATCAGATGGCCAAATACACAAGTATCTCTATTTTTGTGGCTTCCAAAATGAG
____________________________________________________________
consensus CATTGAGTATCAGATGGCCAAATACACAAGTATCTCTATTTTTGTGGCTTCCAAAATGAG
. : . : . : . : . : . :
JMFN011L10+ CTGGATTAGAAGGTCAAACATATATCAGTTCTTCCTTCCCTCGCATAGAATAACATGGTA
rJMSF040D09- CTGGATTAGAAGGTCAAACATATATCAGTTCTTCCTTCCCTCGCATAGAATAACATGGTA
JMSF040D09+ CTGGATTAGAAGGTCAAACATATATCAGTTCTTCCTTCCCTCGCATAGAATAACATGGTA
____________________________________________________________
consensus CTGGATTAGAAGGTCAAACATATATCAGTTCTTCCTTCCCTCGCATAGAATAACATGGTA
. : . : . : . : . : . :
JMFN011L10+ CCCATGCGTTGATTTGAATGGTGCACTAGTAGCTCCAATAGTTGTGTTAAAGGCAACTTC
rJMSF040D09- CCCATGCGTTGATTTGAATGGTGCACTAGTAGCTCCAATAGTTGTGTTAAAGGCAACTTC
JMSF040D09+ CCCATGCGTTGATTTGAATGGTGCACTAGTAGCTCCAATAGTTGTGTTAAAGGCAACTTC
____________________________________________________________
consensus CCCATGCGTTGATTTGAATGGTGCACTAGTAGCTCCAATAGTTGTGTTAAAGGCAACTTC
. : . : . : . : . : . :
JMFN011L10+ CTGAAATGGGCCAGCCATTTTGCCACGTGGAAACCATCCAAGATCTCCACCTTTCTTTCC
rJMSF040D09- CTGAAATGGGCCAGCCATTTTGCCACGTGGAAACCATCCAAGATCTCCACCTTTCTTTCC
JMSF040D09+ CTGAAATGGGCCAGCCATTTTGCCACGTGGAAACCATCCAAGATCTCCACCTTTCTTTCC
____________________________________________________________
consensus CTGAAATGGGCCAGCCATTTTGCCACGTGGAAACCATCCAAGATCTCCACCTTTCTTTCC
. : . : . : . : . : . :
JMFN011L10+ TGATGGACATTCTGAATATTCTGCAGCTAGCTTAGCAAACTCAGACGGTGGAACCTTATC
rJMSF040D09- TGATGGACATTCTGAATATTCTGCAGCTAGCTTAGCAAACTCAGACGGTGGAACCTTATC
JMSF040D09+ TGATGGACATTCTGAATATTCTGCAGCTAGCTTAGCAAACTCAGACGGTGGAACCTTATC
____________________________________________________________
consensus TGATGGACATTCTGAATATTCTGCAGCTAGCTTAGCAAACTCAGACGGTGGAACCTTATC
. : . : . : . : . : . :
JMFN011L10+ TCCATTGTCCAACCAGCCATCTTGTAGCTTCTTGTATGCTTCATTAATCTTAGACTGCTT
rJMSF040D09- TCCATTGTCCAACCAGCCATCTTGTAGCTTCTTGTATGCTTCATTAATCTTAGACTGCTT
JMSF040D09+ TCCATTGTCCAACCAGCCATCTTGTAGCTTCTTGTATGCTTCATTAATCTTAGACTGCTT
____________________________________________________________
consensus TCCATTGTCCAACCAGCCATCTTGTAGCTTCTTGTATGCTTCATTAATCTTAGACTGCTT
. : . : . : . : . : . :
JMFN011L10+ CTCACATAGGATATGCCTTGCTTTCACATATGTACAGGTTCCAAGGCCATCTCCCTTTCC
rJMSF040D09- CTCACATAGGATATGCCTTGCTTTCACATATGTACAGGTTCCAAGGCCATCTCCCTTTCC
JMSF040D09+ CTCACATAGGATATGCCTTGCTTTCACATATGTACAGGTTCCAAGGCCATCTCCCTTTCC
____________________________________________________________
consensus CTCACATAGGATATGCCTTGCTTTCACATATGTACAGGTTCCAAGGCCATCTCCCTTTCC
. : . : . : . : . : . :
JMFN011L10+ ACCTTTTCCTTTACCCTTCGAACCAGTGTCATCACTTCCACCCGCTGCCTGTTTACCCTT
rJMSF040D09- ACCTTTTCCTTTACCCTTCGAACCAGTGTCATCACTTCCACCCGCTGCCTGTTTACCCTT
JMSF040D09+ ACCTTTTCCTTTACCCTTCGAACCAGTGTCATCACTTCCACCCGCTGCCTGTTTACCCTT
____________________________________________________________
consensus ACCTTTTCCTTTACCCTTCGAACCAGTGTCATCACTTCCACCCGCTGCCTGTTTACCCTT
. : . : . : . : . : . :
JMFN011L10+ TCCCTTGCTATCCTTGGCCTTGGAATCTTTCCCCATGGATGTGAGCTTTTACTCTGA
rJMSF040D09- TCCCTTGCTATCCTTGGCCTTGGAATCTTTCCCCATGGATGTGAGCTTTTACTCTGATAA
JMSF040D09+ TCCCTTGCTATCCTTGGCCTTGGAATCTTTCCCCATGGATGTGAGCTTTTACTCTGATAA
____________________________________________________________
consensus TCCCTTGCTATCCTTGGCCTTGGAATCTTTCCCCATGGATGTGAGCTTTTACTCTGATAA
. : . : . : . : . : . :
rJMSF040D09- TTAGTTTCGATGGATTGGAGAGTGGAGTATTGGAGATGAGGGCTGGCGTATAATTGCGCC
JMSF040D09+ TTAGTTTCGATGGATTGGAGAGTGGAGTATTGGAGATGAGGGCTGGCGTATAATTGCGCC
____________________________________________________________
consensus TTAGTTTCGATGGATTGGAGAGTGGAGTATTGGAGATGAGGGCTGGCGTATAATTGCGCC