Contig 003818:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF040C06-                     GCCTGATCTCAATCCCTTGCACAATGATGCCGCCCTTAGGCTGCCCACC
                      ____________________________________________________________
consensus                        GCCTGATCTCAATCCCTTGCACAATGATGCCGCCCTTAGGCTGCCCACC
 
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rJMSF040C06-          ATGCACCTCCATCAAACTAATCTCTACCCAGTCTTCTTCTTCACTACCTCTGATGAAAAT
                      ____________________________________________________________
consensus             ATGCACCTCCATCAAACTAATCTCTACCCAGTCTTCTTCTTCACTACCTCTGATGAAAAT
 
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rJMSF040C06-          CTCTCCCAATTCAACTTCCATCCATTTATCGCCTCTCCCCTTTGGGTGTTCGCCATCTGG
                      ____________________________________________________________
consensus             CTCTCCCAATTCAACTTCCATCCATTTATCGCCTCTCCCCTTTGGGTGTTCGCCATCTGG
 
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rJMSF040C06-          GGGTGGATTCGCGTTTTGTCCAGTTTGGCGATGACCAAGTTGCCCCATTCGCCATGACCT
                      ____________________________________________________________
consensus             GGGTGGATTCGCGTTTTGTCCAGTTTGGCGATGACCAAGTTGCCCCATTCGCCATGACCT
 
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rJMSF040C06-          CTCCGCTTCATCCGGATCCAATTCCCACGGACCAAGCTTGGTTCTTGGCCTTACCAGCAC
JMSF040C06+                                                             TTACCAGCAC
                      ____________________________________________________________
consensus             CTCCGCTTCATCCGGATCCAATTCCCACGGACCAAGCTTGGTTCTTGGCCTTACCAGCAC
 
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rJMSF040C06-          TTTTTTGGGATCCAGGTAAACAATCCTTGTTACAGCCTCCTGGCCGATAATCCTGACTAA
JMFN005H12+                                                    GGCCGATAATCCTGACTAA
JMSF040C06+           TTTTTTGGGATCCAGGTAAACAATCCTTGTTACAGCCTCCTGGCCGATAATCCTGACTAA
                      ____________________________________________________________
consensus             TTTTTTGGGATCCAGGTAAACAATCCTTGTTACAGCCTCCTGGCCGATAATCCTGACTAA
 
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rJMSF040C06-          AGCATCCACAGGTTGGGATTCAAAGCCATAGATGTTTGCTCTCACTCTGAACACAAGGTA
JMFN005H12+           AGCATCCACAGGTTGGGATTCAAAGCCATAGATGTTTGCTCTCACTCTGAACACAAGGTA
JMSF040C06+           AGCATCCACAGGTTGGGATTCAAAGCCATAGATGTTTGCTCTCACTCTGAACACAAGGTA
                      ____________________________________________________________
consensus             AGCATCCACAGGTTGGGATTCAAAGCCATAGATGTTTGCTCTCACTCTGAACACAAGGTA
 
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rJMSF040C06-          TGCTGCATAGTTAGTATCTGGCGACAACATCTTTGTACTAATCTTGCCACGAATTTCAAA
JMFN005H12+           TGCTGCATAGTTAGTATCTGGCGACAACATCTTTGTACTAATCTTGCCACGAATTTCAAA
JMSF040C06+           TGCTGCATAGTTAGTATCTGGCGACAACATCTTTGTACTAATCTTGCCACGAATTTCAAA
                      ____________________________________________________________
consensus             TGCTGCATAGTTAGTATCTGGCGACAACATCTTTGTACTAATCTTGCCACGAATTTCAAA
 
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rJMSF040C06-          CCACCATACGTGCAATAGCTCATTAACTTCGGAGAACCTTGATCCAGGAAGAGAAAGACA
JMFN005H12+           CCACCATACGTGCAATAGCTCATTAACTTCGGAGAACCTTGATCCAGGAAGAGAAAGACA
JMSF040C06+           CCACCATACGTGCAATAGCTCATTAACTTCGGAGAACCTTGATCCAGGAAGAGAAAGACA
                      ____________________________________________________________
consensus             CCACCATACGTGCAATAGCTCATTAACTTCGGAGAACCTTGATCCAGGAAGAGAAAGACA
 
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rJMSF040C06-          CCTCCAATATCTAGCATCATTGCCCCAAGCAATGTCGAGTGACCTTGCAGCTAACATGTA
JMFN005H12+           CCTCCAATATCTAGCATCATTGCCCCAAGCAATGTCGAGTGACCTTGCAGCTAACATGTA
JMSF040C06+           CCTCCAATATCTAGCATCATTGCCCCAAGCAATGTCGAGTGACCTTGCAGCTAACATGTA
                      ____________________________________________________________
consensus             CCTCCAATATCTAGCATCATTGCCCCAAGCAATGTCGAGTGACCTTGCAGCTAACATGTA
 
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rJMSF040C06-          ACATTTCTTCCCACTCGTTTTGTCCAGTGAAAAACTCTTAGCGCCGCAGTCAATAATTAC
JMFN005H12+           ACATTTCTTCCCACTCGTTTTGTCCAGTGAAAAACTCTTAGCGCCGCAGTCAATAATTAC
JMSF040C06+           ACATTTCTTCCCACTCGTTTTGTCCAGTGAAAAACTCTTAGCGCCGCAGTCAATAATTAC
                      ____________________________________________________________
consensus             ACATTTCTTCCCACTCGTTTTGTCCAGTGAAAAACTCTTAGCGCCGCAGTCAATAATTAC
 
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rJMSF040C06-          GGGATGATCGCAGAGGTAGAAGTAGAGATCCTTCTTCGAGGTAAAGGCGAGCAAATCGCC
JMFN005H12+           GGGATGATCGCAGAGGTAGAAGTAGAGATCCTTCTTCGAGGTAAAGGCGAGCAAATCGCC
JMSF040C06+           GGGATGATCGCAGAGGTAGAAGTAGAGATCCTTCTTCGAGGTAAAGGCGAGCAAATCGCC
                      ____________________________________________________________
consensus             GGGATGATCGCAGAGGTAGAAGTAGAGATCCTTCTTCGAGGTAAAGGCGAGCAAATCGCC
 
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rJMSF040C06-          GGCGTTAGTGGCCCGGGAAACGAGGTCGCGGTAATCGGGAGGCAAGAACCGTTCCCAGAC
JMFN005H12+           GGCGTTAGTGGCCCGGGAAACGAGGTCGCGGTAATCGGGAGGCAAGAACCGTTCCCAGAC
JMSF040C06+           GGCGTTAGTGGCCCGGGAAACGAGGTCGCGGTAATCGGGAGGCAAGAACCGTTCCCAGAC
                      ____________________________________________________________
consensus             GGCGTTAGTGGCCCGGGAAACGAGGTCGCGGTAATCGGGAGGCAAGAACCGTTCCCAGAC
 
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rJMSF040C06-          GGCGTCGAATTGTGCTGCGGAATGAAAGTTGGAGGCCACCAG                  
JMFN005H12+           GGCGTCGAATTGTGCTGCGGAATGAAAGTTGGAGGCCACCAGGGACAGACGACAGGCGTC
JMSF040C06+           GGCGTCGAATTGTGCTGCGGAATGAAAGTTGGAGGCCACCAGGGACAGACGACAGGCGTC
                      ____________________________________________________________
consensus             GGCGTCGAATTGTGCTGCGGAATGAAAGTTGGAGGCCACCAGGGACAGACGACAGGCGTC
 
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JMFN005H12+           CTTAGGCGTCGTCATCGACAGCGCGTTCGCTATGCAATTCTCAGGCAGCATCGCGAAGAT
JMSF040C06+           CTTAGGCGTCGTCATCGACAGCGCGTTCGCTATGCAATTCTCAGGCAGCATCGCGAAGAT
                      ____________________________________________________________
consensus             CTTAGGCGTCGTCATCGACAGCGCGTTCGCTATGCAATTCTCAGGCAGCATCGCGAAGAT
 
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JMFN005H12+           ATCCGCGCCGGTAACGTTCTCCACCGCCATTTCTTAATCTCAGTTGTG            
JMSF040C06+           ATCCGCGCCGGTAACGTTCTCCACCGCCATTTCTTAATCTCAGTTGTGGGATAGTCGGAC
                      ____________________________________________________________
consensus             ATCCGCGCCGGTAACGTTCTCCACCGCCATTTCTTAATCTCAGTTGTGGGATAGTCGGAC