Contig 003816:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008B11Sequence613003816 (3)
JMSF014B05Sequence339003816 (3)
JMSF039L21Sequence643003816 (3)ref|XP_009626263.1|52.8PREDICTED: uncharacterized protein LOC104116995 [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF008B11+ TTCCAAAAGTCCAA
JMSF039L21+ ACACGAGCCGAATGAGGCTTGGAGTTTGATTCCAAAAGTCCAA
                      ____________________________________________________________
consensus ACACGAGCCGAATGAGGCTTGGAGTTTGATTCCAAAAGTCCAA
 
. : . : . : . : . : . :
JMFF008B11+ CTTTGTGAGCATGTTCTATAGGCGAGCTATGACCTAGTTGGGGATTGTGGTGCTGGGCTT
JMSF039L21+ CTTTGTGAGCATGTTCTATAGGCGAGCTATGACCTAGTTGGGGATTGTGGTGCTGGGCTT
                      ____________________________________________________________
consensus CTTTGTGAGCATGTTCTATAGGCGAGCTATGACCTAGTTGGGGATTGTGGTGCTGGGCTT
 
. : . : . : . : . : . :
JMFF008B11+ GATGGAAGCCAGCCGGGCTTAATGAGAAATTAGGGTTAGGGCTTTGGGCAAACCCTTGCA
JMSF039L21+ GATGGAAGCCAGCCGGGCTTAATGAGAAATTAGGGTTAGGGCTTTGGGCAAACCCTTGCA
                      ____________________________________________________________
consensus GATGGAAGCCAGCCGGGCTTAATGAGAAATTAGGGTTAGGGCTTTGGGCAAACCCTTGCA
 
. : . : . : . : . : . :
JMFF008B11+ GGAAGAAATTGTGGGGAGCAAATATGGGCGTACCAGCGGGAGGCGGAGTCTGCTGCTGCC
JMSF039L21+ GGAAGAAATTGTGGGGAGCAAATATGGGCGTACCAGCGGGAGGCGGAGTCTGCTGCTGCC
                      ____________________________________________________________
consensus GGAAGAAATTGTGGGGAGCAAATATGGGCGTACCAGCGGGAGGCGGAGTCTGCTGCTGCC
 
. : . : . : . : . : . :
JMFF008B11+ ACGGAGGAGCAAAGGCGAGATCGTGAGCGGTGGACGGCGGCTGGTAGAATGGCGGGAACG
JMSF039L21+ ACGGAGGAGCAAAGGCGAGATCGTGAGCAGTGGACGGCGGCTGGTAGAATGGCGGGAACG
                      ____________________________________________________________
consensus ACGGAGGAGCAAAGGCGAGATCGTGAGCGGTGGACGGCGGCTGGTAGAATGGCGGGAACG
 
. : . : . : . : . : . :
JMFF008B11+ GCACACTGGGCCCCACTCTCGCAACCGCCGGATCGTGCTGTAGGGCCTGCGGCGGAGGCA
JMSF014B05+ CAACCGCCGGATCGTGCTGTAGGGCCTGCGGCGGAGGCA
JMSF039L21+ GCACACTGGGCCCCACTCTCGCAACCGCCGGATCGTGCTGTAGGGCCTGCGGCGGAGGCA
                      ____________________________________________________________
consensus GCACACTGGGCCCCACTCTCGCAACCGCCGGATCGTGCTGTAGGGCCTGCGGCGGAGGCA
 
. : . : . : . : . : . :
JMFF008B11+ CAGGTCGAGCAGCAGCCGGAGGGTGATTCGGAGGATTCTGGAGTAATTGGAGAAGGAACT
JMSF014B05+ CAGGTCGAGCAGCAGCCGGAGGGTGATTCGGAGGATTCTGGAGTAATTGGAGAAGGAACT
JMSF039L21+ CAGGTCGAGCAGCAGCCGGAGGGTGATTCGGAGGATTCTGGAGTAATTGGAGAAGGAACT
                      ____________________________________________________________
consensus CAGGTCGAGCAGCAGCCGGAGGGTGATTCGGAGGATTCTGGAGTAATTGGAGAAGGAACT
 
. : . : . : . : . : . :
JMFF008B11+ CCCCGCCGTTGACGGCCGCGGGTGGCGCCGGCTGAGGCGAGGCGTCACTCCCACCGCTCC
JMSF014B05+ CCCCGCCGTTGACGGCCGCGGGTGGCGCCGGCTGAGGCGAGGCGTCACTCCCACCGCTCC
JMSF039L21+ CCCCGCCGTTGACGGCCGCGGGTGGCGCCGGCTGAGGCGAGGCGTCACTCCCACCGCTCC
                      ____________________________________________________________
consensus CCCCGCCGTTGACGGCCGCGGGTGGCGCCGGCTGAGGCGAGGCGTCACTCCCACCGCTCC
 
. : . : . : . : . : . :
JMFF008B11+ TCATGAAGCTTGACGACATTTCCGGAAGTCGTCTAGCAACACTACAAGATATACGCCTGT
JMSF014B05+ TCATGAAGCTTGACGACATTTCCGGAAGTCGTCTAGCAACACTACAAGATATACGCCTGT
JMSF039L21+ TCATGAAGCTTGACGACATTTCCGGAAGTCGTCTAGCAACACTACAAGATATACGCCTGT
                      ____________________________________________________________
consensus TCATGAAGCTTGACGACATTTCCGGAAGTCGTCTAGCAACACTACAAGATATACGCCTGT
 
. : . : . : . : . : . :
JMFF008B11+ AATCCTGTATTACTAAAACTTATATATAATATATATGCAGATTGGTATATAAATCAAGAC
JMSF014B05+ AATCCTGTATTACTAAAACTTATATATAATATATATGCAGATTGGTATATAAATCAAGAC
JMSF039L21+ AATCCTGTATTACTAAAACTTATATATAATATATATGCAGATTGGTATATAAATCAAGAC
                      ____________________________________________________________
consensus AATCCTGTATTACTAAAACTTATATATAATATATATGCAGATTGGTATATAAATCAAGAC
 
. : . : . : . : . : . :
JMFF008B11+ TAATGGAGTATCAAGTGTAGATAGAGAGAGAATATCTGATAAAGTGATGACGATTCGAT
JMSF014B05+ TAATGGAGTATCAAGTGTAGATAGAGAGAGAATATCTGATAAAGTGATGACGATTCGAT
JMSF039L21+ TAATGGAGTATCAAGTGTAGATAGAGAGAGAATATCTGATAAAGTGATGACGATTCGATC
                      ____________________________________________________________
consensus TAATGGAGTATCAAGTGTAGATAGAGAGAGAATATCTGATAAAGTGATGACGATTCGATC