Contig 003816:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF008B11+                                                         TTCCAAAAGTCCAA
JMSF039L21+                            ACACGAGCCGAATGAGGCTTGGAGTTTGATTCCAAAAGTCCAA
                      ____________________________________________________________
consensus                              ACACGAGCCGAATGAGGCTTGGAGTTTGATTCCAAAAGTCCAA
 
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JMFF008B11+           CTTTGTGAGCATGTTCTATAGGCGAGCTATGACCTAGTTGGGGATTGTGGTGCTGGGCTT
JMSF039L21+           CTTTGTGAGCATGTTCTATAGGCGAGCTATGACCTAGTTGGGGATTGTGGTGCTGGGCTT
                      ____________________________________________________________
consensus             CTTTGTGAGCATGTTCTATAGGCGAGCTATGACCTAGTTGGGGATTGTGGTGCTGGGCTT
 
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JMFF008B11+           GATGGAAGCCAGCCGGGCTTAATGAGAAATTAGGGTTAGGGCTTTGGGCAAACCCTTGCA
JMSF039L21+           GATGGAAGCCAGCCGGGCTTAATGAGAAATTAGGGTTAGGGCTTTGGGCAAACCCTTGCA
                      ____________________________________________________________
consensus             GATGGAAGCCAGCCGGGCTTAATGAGAAATTAGGGTTAGGGCTTTGGGCAAACCCTTGCA
 
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JMFF008B11+           GGAAGAAATTGTGGGGAGCAAATATGGGCGTACCAGCGGGAGGCGGAGTCTGCTGCTGCC
JMSF039L21+           GGAAGAAATTGTGGGGAGCAAATATGGGCGTACCAGCGGGAGGCGGAGTCTGCTGCTGCC
                      ____________________________________________________________
consensus             GGAAGAAATTGTGGGGAGCAAATATGGGCGTACCAGCGGGAGGCGGAGTCTGCTGCTGCC
 
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JMFF008B11+           ACGGAGGAGCAAAGGCGAGATCGTGAGCGGTGGACGGCGGCTGGTAGAATGGCGGGAACG
JMSF039L21+           ACGGAGGAGCAAAGGCGAGATCGTGAGCAGTGGACGGCGGCTGGTAGAATGGCGGGAACG
                      ____________________________________________________________
consensus             ACGGAGGAGCAAAGGCGAGATCGTGAGCGGTGGACGGCGGCTGGTAGAATGGCGGGAACG
 
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JMFF008B11+           GCACACTGGGCCCCACTCTCGCAACCGCCGGATCGTGCTGTAGGGCCTGCGGCGGAGGCA
JMSF014B05+                                CAACCGCCGGATCGTGCTGTAGGGCCTGCGGCGGAGGCA
JMSF039L21+           GCACACTGGGCCCCACTCTCGCAACCGCCGGATCGTGCTGTAGGGCCTGCGGCGGAGGCA
                      ____________________________________________________________
consensus             GCACACTGGGCCCCACTCTCGCAACCGCCGGATCGTGCTGTAGGGCCTGCGGCGGAGGCA
 
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JMFF008B11+           CAGGTCGAGCAGCAGCCGGAGGGTGATTCGGAGGATTCTGGAGTAATTGGAGAAGGAACT
JMSF014B05+           CAGGTCGAGCAGCAGCCGGAGGGTGATTCGGAGGATTCTGGAGTAATTGGAGAAGGAACT
JMSF039L21+           CAGGTCGAGCAGCAGCCGGAGGGTGATTCGGAGGATTCTGGAGTAATTGGAGAAGGAACT
                      ____________________________________________________________
consensus             CAGGTCGAGCAGCAGCCGGAGGGTGATTCGGAGGATTCTGGAGTAATTGGAGAAGGAACT
 
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JMFF008B11+           CCCCGCCGTTGACGGCCGCGGGTGGCGCCGGCTGAGGCGAGGCGTCACTCCCACCGCTCC
JMSF014B05+           CCCCGCCGTTGACGGCCGCGGGTGGCGCCGGCTGAGGCGAGGCGTCACTCCCACCGCTCC
JMSF039L21+           CCCCGCCGTTGACGGCCGCGGGTGGCGCCGGCTGAGGCGAGGCGTCACTCCCACCGCTCC
                      ____________________________________________________________
consensus             CCCCGCCGTTGACGGCCGCGGGTGGCGCCGGCTGAGGCGAGGCGTCACTCCCACCGCTCC
 
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JMFF008B11+           TCATGAAGCTTGACGACATTTCCGGAAGTCGTCTAGCAACACTACAAGATATACGCCTGT
JMSF014B05+           TCATGAAGCTTGACGACATTTCCGGAAGTCGTCTAGCAACACTACAAGATATACGCCTGT
JMSF039L21+           TCATGAAGCTTGACGACATTTCCGGAAGTCGTCTAGCAACACTACAAGATATACGCCTGT
                      ____________________________________________________________
consensus             TCATGAAGCTTGACGACATTTCCGGAAGTCGTCTAGCAACACTACAAGATATACGCCTGT
 
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JMFF008B11+           AATCCTGTATTACTAAAACTTATATATAATATATATGCAGATTGGTATATAAATCAAGAC
JMSF014B05+           AATCCTGTATTACTAAAACTTATATATAATATATATGCAGATTGGTATATAAATCAAGAC
JMSF039L21+           AATCCTGTATTACTAAAACTTATATATAATATATATGCAGATTGGTATATAAATCAAGAC
                      ____________________________________________________________
consensus             AATCCTGTATTACTAAAACTTATATATAATATATATGCAGATTGGTATATAAATCAAGAC
 
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JMFF008B11+           TAATGGAGTATCAAGTGTAGATAGAGAGAGAATATCTGATAAAGTGATGACGATTCGAT 
JMSF014B05+           TAATGGAGTATCAAGTGTAGATAGAGAGAGAATATCTGATAAAGTGATGACGATTCGAT 
JMSF039L21+           TAATGGAGTATCAAGTGTAGATAGAGAGAGAATATCTGATAAAGTGATGACGATTCGATC
                      ____________________________________________________________
consensus             TAATGGAGTATCAAGTGTAGATAGAGAGAGAATATCTGATAAAGTGATGACGATTCGATC