| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS047A10 | Sequence | 594 | 003813 (6) | emb|CDP08239.1| | 3e-29 | unnamed protein product [Coffea canephora] | |||||
| JMFS140C07 | Sequence | 621 | 003813 (6) | ref|XP_004253096.1| | 2e-42 | PREDICTED: far upstream element-binding protein 2 [Solanum lycopersicum] | |||||
| JMFS142G07 | Sequence | 613 | 003813 (6) | ref|XP_004253096.1| | 1e-44 | PREDICTED: far upstream element-binding protein 2 [Solanum lycopersicum] | |||||
| JMFS158C02 | Sequence | 506 | 003813 (6) | ref|XP_004253096.1| | 2e-31 | PREDICTED: far upstream element-binding protein 2 [Solanum lycopersicum] | |||||
| JMSF033L22 | Sequence | 622 | 003813 (6) | ref|XP_004253096.1| | 7e-63 | PREDICTED: far upstream element-binding protein 2 [Solanum lycopersicum] | 677 | 012571 (8) | gb|AHC94919.1| | 7e-78 | early responsive to dehydration protein 15 [Ipomoea batatas] |
| JMSF039J01 | Sequence | 606 | 003813 (6) | ref|XP_004253096.1| | 1e-41 | PREDICTED: far upstream element-binding protein 2 [Solanum lycopersicum] | 871 | 013606 (3) | emb|CDP08239.1| | 7e-14 | unnamed protein product [Coffea canephora] |
This contig is upended
. : . : . : . : . : . :
JMFS158C02+ CGTGATACTATGCCAGAACCACGTGAATCAGCGTCAGAAAGCACATCT
____________________________________________________________
consensus CGTGATACTATGCCAGAACCACGTGAATCAGCGTCAGAAAGCACATCT
. : . : . : . : . : . :
JMFS158C02+ TGAATCAACTGCTCAGCCTTGGCTATGTGCTCTGGAGTGCCCATTAGTTCAACCCCTGTA
JMFS142G07+ GAGTGCCCATTAGTTCAACCCCTGTA
JMSF033L22+ GCTCTGGAGTGCCCATTAGTTCAACCCCTCTA
____________________________________________________________
consensus TGAATCAACTGCTCAGCCTTGGCTATGTGCTCTGGAGTGCCCATTAGTTCAACCCCTGTA
. : . : . : . : . : . :
JMFS158C02+ GTTTGAGAATTAGGGTCAGCATCCATGTCTCTGGTAACTTGTATCTTTGCTCCAGATTGC
JMFS142G07+ GTTTGAGAATTAGGGTCAGCATCCATGTCTGTGGTAACTTGTATCTCAGCTCCAGATTGC
JMFS140C07+ TTGAGAATTACGGTCAGCATCCATGTCTCTGGTAACTTGTATCTTTGCTCCATATTGG
JMFS047A10+ AGCATCCATGTCTCTGGTAACTGGTATCTATGCTCCAGATTGG
JMSF033L22+ GTTTGAGAATTAGGGTCAGCATCCATGTCTCTGGTAACTTGTATCTTTGCTCCAGATTGG
JMSF039J01+ TTGCTCCAGATNGG
____________________________________________________________
consensus GTTTGAGAATTAGGGTCAGCATCCATGTCTCTGGTAACTTGTATCTTTGCTCCAGATTGG
. : . : . : . : . : . :
JMFS158C02+ AGTTGAAGATACCGAATGGTTTCCCCACCTTGGCCTATGTATTACACCACCCCTGCCATT
JMFS142G07+ AGTTGCAGATCCGGAATGGTTTCCCCACCTTAGCCTATGATTACACCACCCC-TGCCATT
JMFS140C07+ AGTTGAAGATACCGAATGGTTTCTCCACCTTTGCCTATGATTACACCAGCCT-TGCCATT
JMFS047A10+ AGTTGAATACACTGAATGGTTTCCCCACCTTTGCTTATGATTACACCAATCCGTGCCATT
JMSF033L22+ AGTTGAAGATACCGAATGGTTTCCCCACCTTTGCCTATGATTACACCAACCC-TGCCATT
JMSF039J01+ AGTTGAAGATACCGAATGGTTTCCCCACCTTTGCCTATGATTACACCAACCC-TGCCATT
____________________________________________________________
consensus AGTTGAAGATACCGAATGGTTTCCCCACCTTTGCCTATGATTACACCAACCC-TGCCATT
. : . : . : . : . : . :
JMFS158C02+ TGGAACGTCAATGGTCCGCCTCTGGACCAGGGTAACCATATGA-ACCAGTTACTGATGGA
JMFS142G07+ TGGAACCTCAATCTTCTTGCTTGATCCA-GGGTAACCATATGA-ACCAGTTACTGATGAA
JMFS140C07+ TGGAACCTCGATCTTCTTGCTTGGCCCATGGGTAACCATATGA-TCCAGTTACTGATGAA
JMFS047A10+ TGTAACCTCAATCTTCTTGCTTGGACCA-GGGTAACCATATGACACCAGTTACTGATGGA
JMSF033L22+ TGGAACCTCAATCTTCTTGCTTGGACCA-GGGTAACCATATGA-ACCAGTTACTGATGGA
JMSF039J01+ TGGAACCTCAATCTTCTTGCTTGGACCA-GGGTAACCATATGA-ACCAGTTACTGATGGA
____________________________________________________________
consensus TGGAACCTCAATCTTCTTGCTTGGACCA-GGGTAACCATATGA-ACCAGTTACTGATGGA
. : . : . : . : . : . :
JMFS158C02+ AGTAAAGTAGTCCCC--CTGCGCTTATGAGGTTCTCTAGTTTCAAATGCCCCAGCGCGGC
JMFS142G07+ AGTAAAGTAGACCCA--ACTGGCTTATAAGGTTCTCTAGTTTCAAATGCTCAAGCGCCGC
JMFS140C07+ AGTAAAGTACCCCCA--ACTGGCTTCTGAGGTTCTCTAGTTTCAAATGCACCAGCGCCGC
JMFS047A10+ AGTAAAGTAGACCCATTCTGCGCTTCTGAGGTTCTTTAGTTTCAAATGCACCAGCGCCGC
JMSF033L22+ AGTAAAGTAGACCCA--ACTGGCTTCTGAGGTTCTCTAGTTTCAAATGCACCAGCGCCGC
JMSF039J01+ AGTAAAGTAGACCCA--ACTGGCTTCTGAGGTTCTCTAGTTTCAAATGCACCAGCGCCGC
____________________________________________________________
consensus AGTAAAGTAGACCCA--ACTGGCTTCTGAGGTTCTCTAGTTTCAAATGCACCAGCGCCGC
. : . : . : . : . : . :
JMFS158C02+ CACAGTTGTCAACCCTGGGCTTTTTTAGATCCCGAGTTGCTGATTAGCCGAGCAGCGATT
JMFS142G07+ CACCGTTGTCAACCTTGGGCTTTTTTAGAT-CCGAGATGTTGATTAGCCGAGCAGCGATC
JMFS140C07+ CTCCGTTGTCAACCCTGGGCTTTTTTACAT-CCGAGTTGTTGATTAGCCGAGCAGCGATC
JMFS047A10+ CACCGTTGTCAACCATGGGCTTTTTTAGAT-CCGAGTTGTTCCTTAGCCGAGCAGCGATC
JMSF033L22+ CACCGTTGTCAACCCTGGGCTTTTTTAGAT-CCGAGTTGTTGATTAGCCGAGCAGCGATC
JMSF039J01+ CACCGTTGTCAACCCTGGGCTTTTTTAGAT-CCGAGTTGTTGATTAGCCGAGCAGCGATC
____________________________________________________________
consensus CACCGTTGTCAACCCTGGGCTTTTTTAGAT-CCGAGTTGTTGATTAGCCGAGCAGCGATC
. : . : . : . : . : . :
JMFS158C02+ TCCTGATGCCCTATGGTTCGCCAGCTGCAAGTCATCCATGGGAGGCGGAACATTGGCGTA
JMFS142G07+ TCATGA-GCCCTCTGCTTCGCCAGTTGAAAGTCATCCATGGCAGTCGGAACATTGGCGTA
JMFS140C07+ TCCTGA-GCCCTCTGCTTCGCCAGTTGGAAGTCATCCATGGCAGGCGCCCCATTGGCGTA
JMFS047A10+ TCTTGA-GCCCTATGATTGGCCAGCTGGAAGTCATCCATGGCAGGCGCATCCTTGGCGTA
JMSF033L22+ TCCTGA-GCCCTCTGCTTCGCCAGCTGGAAGTCATCCATGGGAGGCGGAACATTGGCGTA
JMSF039J01+ TCCTGA-GCCCTCTGCTTCGCCAGCTGGAAGTCATCCATGGGAGGCGGAACATTGGCGTA
____________________________________________________________
consensus TCCTGA-GCCCTCTGCTTCGCCAGCTGGAAGTCATCCATGGGAGGCGGAACATTGGCGTA
. : . : . : . : . : . :
JMFS158C02+ TGA-AGGAGAAGGAGCAGCCCCGCCGCCGCAACCGTCGGGTG
JMFS142G07+ CAATAGGAGGAGGACCAACCGCGTCGGTGGAGCCGTCGGGTGGACACAGTGAAGAGATTG
JMFS140C07+ CGA-AGGAGGAG
JMFS047A10+ CGA-AGGAGGAG
JMSF033L22+ CAA-AGGAGGAGGAGCAGCCGCGGCGGCGGAACCGTCGGGTGGAGACAGTGAAGAGATTG
JMSF039J01+ CGA-AGGAGGAGGAGCAGCCGCGGCGGCGGAACCGTCGGGTGGAGACAGTGAAGAGATTG
____________________________________________________________
consensus CGA-AGGAGGAGGAGCAGCCGCGGCGGCGGAACCGTCGGGTGGAGACAGTGAAGAGATTG
. : . : . : . : . : . :
JMFS142G07+ GT-CGTAGAATCCAGTGGGCCTGCCGCAAACCGTACAAGAACACGTTGGCTCATCGTACC
JMSF033L22+ GTGCGGAGAATCCAGTGGGCCTGCGCGAAACCGGAGAAGGAGACGTTGGCTCCTCGTACT
JMSF039J01+ GTGCGGAGAATCCAGTGGGCCTGCGCGAAACCGGAGAAGGAGACGTTGGCTCCTCGTACT
____________________________________________________________
consensus GTGCGGAGAATCCAGTGGGCCTGCGCGAAACCGGAGAAGGAGACGTTGGCTCCTCGTACT
. : . : . : . : . : . :
JMFS142G07+ TCCTCTTATTCGACCCCGCTTAGAATGCGTACTGTGCGTCTTCGG
JMSF033L22+ TCCTCTTATTCGACCCCGCTTCGGATGCGTACTGTGCGTCTTCGGCCATTTTTGGTCCGA
JMSF039J01+ TCCTCTTATTCGACCCCGCTTCGGATGCGTACTGTGCGTCTTCGGCCATTTTTGGTCCGA
____________________________________________________________
consensus TCCTCTTATTCGACCCCGCTTCGGATGCGTACTGTGCGTCTTCGGCCATTTTTGGTCCGA
. : . : . : . : . : . :
JMSF033L22+ AAGAGG
JMSF039J01+ AAGAGGGAGAAGAGAGCAGGAGTGCGTAGAGGGGTCTGGAAGTGGAAACCCTAGCCTAGA
____________________________________________________________
consensus AAGAGGGAGAAGAGAGCAGGAGTGCGTAGAGGGGTCTGGAAGTGGAAACCCTAGCCTAGA
. : . : . : . : . : . :
JMSF039J01+ TTGGGAGAGAACCCGACAGACAGGAGCGATGGGATGGAAGAATGAAAATAGCGGTCTACC
____________________________________________________________
consensus TTGGGAGAGAACCCGACAGACAGGAGCGATGGGATGGAAGAATGAAAATAGCGGTCTACC