Contig 003811:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN020D11Sequence674003811 (5)ref|XP_009334366.1|6e-103PREDICTED: ORM1-like protein 2 [Pyrus x bretschneideri]
JMFN038H21Sequence432003811 (5)ref|XP_009334366.1|3e-62PREDICTED: ORM1-like protein 2 [Pyrus x bretschneideri]
JMSF039C20Sequence596003811 (5)ref|XP_009334366.1|4e-103PREDICTED: ORM1-like protein 2 [Pyrus x bretschneideri]595003811 (5)ref|XP_009334366.1|4e-103PREDICTED: ORM1-like protein 2 [Pyrus x bretschneideri]
JMSF041C20Sequence604003811 (5)ref|XP_009334366.1|1e-102PREDICTED: ORM1-like protein 2 [Pyrus x bretschneideri]

Alignment

This contig is upended


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JMFN020D11+                                       TGGTACGCAGGTTTCCAGTCCGACGTGTAACG
                      ____________________________________________________________
consensus                                         TGGTACGCAGGTTTCCAGTCCGACGTGTAACG
 
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JMFN020D11+           CGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGT
                      ____________________________________________________________
consensus             CGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGT
 
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JMFN020D11+           TTTTTTTTTTNTNTNTGCAGAACAGAGCAAGGATGAGAACCTTACATATATTTAAAAGAT
rJMSF041C20-                                                                 AAGAT
                      ____________________________________________________________
consensus             TTTTTTTTTTNTNTNTGCAGAACAGAGCAAGGATGAGAACCTTACATATATTTAAAAGAT
 
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JMFN020D11+           TTCAGAGGAACCAACTCACT-GATCCCCATTGATTCCAAAGATTCGGACTTTGTGCATAT
rJMSF041C20-          TTCAGAGGAACCAACTCACTGGATCCCCATTGATTCCAAAGATTCGGACTTTGTGCATAT
rJMSF039C20-             AGAGGAACCAACTCACT-GATCCCCATTGATTCCAAAGATTCGGACTTTGTGCATAT
JMFN038H21+                                                               GTGCATAT
JMSF039C20+              AGAGGAACCAACTCACT-GATCCCCATTGATTCCAAAGATTCGGACTTTGTGCATAT
                      ____________________________________________________________
consensus             TTCAGAGGAACCAACTCACT-GATCCCCATTGATTCCAAAGATTCGGACTTTGTGCATAT
 
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JMFN020D11+           TGGGGAACTTCGCAATCACTAAAACTAGTACCGCAAGTGTATTGAAGAAAAGCATTGGAT
rJMSF041C20-          TGGGGAACTTCGCAATCACTAAAACTAGTACCGCAAGTGTATTGAAGAAAAGCATTGGAT
rJMSF039C20-          TGGGGAACTTCGCAATCACTAAAACTAGTACCGCAAGTGTATTGAAGAAAAGCATTGGAT
JMFN038H21+           TGGGGAACTTCGCAATCACTAAAACTAGTTCCGCAAGTGTATTGAAGAAAAGCATTGGAT
JMSF039C20+           TGGGGAACTTCGCAATCACTAAAACTAGTACCGCAAGTGTATTGAAGAAAAGCATTGGAT
                      ____________________________________________________________
consensus             TGGGGAACTTCGCAATCACTAAAACTAGTACCGCAAGTGTATTGAAGAAAAGCATTGGAT
 
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JMFN020D11+           GTTCGTAATCAGTTGTATGTGAGGCTATCAAGTACAAAACCACAGGCACAACTGTTAGGA
rJMSF041C20-          GTTCGTAATCAGTTGTATGTGAGGCTATCAAGTACAAAACCACAGGCACAACTGTTAGGA
rJMSF039C20-          GTTCGTAATCAGTTGTATGTGAGGCTATCAAGTACAAAACCACAGGCACAACTGTTAGGA
JMFN038H21+           GTTCGTAATCAGTTGTATGCGAGGCTATCAAGTACAAATCCACAGGCACAACTGTTAGGA
JMSF039C20+           GTTCGTAATCAGTTGTATGTGAGGCTATCAAGTACAAAACCACAGGCACAACTGTTAGGA
                      ____________________________________________________________
consensus             GTTCGTAATCAGTTGTATGTGAGGCTATCAAGTACAAAACCACAGGCACAACTGTTAGGA
 
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JMFN020D11+           ATTTTCTATTGCGAGTGAGTTGCTTGCCATGGTCTATTTGCTCCCACCAAGTCAACCGAT
rJMSF041C20-          ATTTTCTATTGCGAGTGAGTTGCTTGCCATGGTCTATTTGCTCCCACCAAGTCAACCGAT
rJMSF039C20-          ATTTTCTATTGCGAGTGAGTTGCTTGCCATGGTCTATTTGCTCCCACCAAGTCAACCGAT
JMFN038H21+           ATTTTTTATTGCGAGTGAGTTGCTTGCCATGGTATATTTGCTCCCACCAAGTCAACCGAT
JMSF039C20+           ATTTTCTATTGCGAGTGAGTTGCTTGCCATGGTCTATTTGCTCCCACCAAGTCAACCGAT
                      ____________________________________________________________
consensus             ATTTTCTATTGCGAGTGAGTTGCTTGCCATGGTCTATTTGCTCCCACCAAGTCAACCGAT
 
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JMFN020D11+           TGTACATTCCCT-GGTCATCAGCAAATGGGGTTCCTTTCTTCCAATGAAAGAAATGATAA
rJMSF041C20-          TGTACATTCCCT-GGTCATCAGCAAATGGGGTTCCTTTCTTCCAATGAAAGAAATGATAA
rJMSF039C20-          TGTACATTCCCT-GGTCATCAGCAAATGGGGTTCCTTTCTTCCAATGAAAGAAATGATAA
JMFN038H21+           TGTACATTCCCTAGGTCATCAGCAAATGGGGTTCCTTTCTTTCAATGAAAGAAATGATAA
JMSF039C20+           TGTACATTCCCT-GGTCATCAGCAAATGGGGTTCCTTTCTTCCAATGAAAGAAATGATAA
                      ____________________________________________________________
consensus             TGTACATTCCCT-GGTCATCAGCAAATGGGGTTCCTTTCTTCCAATGAAAGAAATGATAA
 
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JMFN020D11+           GTGATGGCGAAGTGGGAGAGATTGACTATGGTCCAAGCCGTGCCGGGGGTGCAGCCGAAG
rJMSF041C20-          GTGATGGCGAAGTGGGAGAGATTGACTATGGTCCAAGCCGTGCCGGGGGTGCAGCCGAAG
rJMSF039C20-          GTGATGGCGAAGTGGGAGAGATTGACTATGGTCCAAGCCGTGCCGGGGGTGCAGCCGAAG
JMFN038H21+           GTGATGGCGAAGTGGGAGAGATTGACTATGGTCCAAGCCGTGCCGGGGGTGCAGCCGAAG
JMSF039C20+           GTGATGGCGAAGTGGGAGAGATTGACTATGGTCCAAGCCGTGCCGGGGGTGCAGCCGAAG
                      ____________________________________________________________
consensus             GTGATGGCGAAGTGGGAGAGATTGACTATGGTCCAAGCCGTGCCGGGGGTGCAGCCGAAG
 
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JMFN020D11+           ACGGAGAGAACGACGAGCCAGGAGAAGAAGAGGATGAGTATGTAGGTGGTCCACACACCG
rJMSF041C20-          ACGGAGAGAACGACGAGCCAGGAGAAGAAGAGGATGAGTATGTAGGTGGTCCACACACCG
rJMSF039C20-          ACGGAGAGAACGACGAGCCAGGAGAAGAAGAGGATGAGTATGTAGGTGGTCCACACACCG
JMFN038H21+           ACGGAGAGACCGACGAGCCAGGAGAAGAAGAGGATGAGTATGTAGGTGGTCCACACACCG
JMSF039C20+           ACGGAGAGAACGACGAGCCAGGAGAAGAAGAGGATGAGTATGTAGGTGGTCCACACACCG
                      ____________________________________________________________
consensus             ACGGAGAGAACGACGAGCCAGGAGAAGAAGAGGATGAGTATGTAGGTGGTCCACACACCG
 
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JMFN020D11+           GGGTACGTAAACCACTCGGTGTTCCGGTTCATATCCGCCGGCGGCACCGCCTTCACGTAC
rJMSF041C20-          GGGTACGTAAACCACTCGGTGTTCCGGTTCATATCCGCCGGCGGCACCGCCTTCACGTAC
rJMSF039C20-          GGGTACGTAAACCACTCGGTGTTCCGGTTCATATCCGCCGGCGGCACCGCCTTCACGTAC
JMFN038H21+           GGGTACGTAACCCACTCGGTGTTCCGGTTCATATCCGCCGGCGGCACCGCCTTCACGTAC
JMSF039C20+           GGGTACGTAAACCACTCGGTGTTCCGGTTCATATCCGCCGGCGGCACCGCCTTCACGTAC
                      ____________________________________________________________
consensus             GGGTACGTAAACCACTCGGTGTTCCGGTTCATATCCGCCGGCGGCACCGCCTTCACGTAC
 
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JMFN020D11+           AAATTCGCCATCGTTTTTCTCGCACCTCAATCAATCGATGGATC                
rJMSF041C20-          AAATTCGCCATCGTTTTTCTCGCACCTCAATCAATCGATGGATCATATACTGTCAAATTT
rJMSF039C20-          AAATTCGCCATCGTTTTTCTCGCACCTCAATCAATCGATGGATCATATACTGTCAAATTT
JMFN038H21+           AAAT                                                        
JMSF039C20+           AAATTCGCCATCGTTTTTCTCGCACCTCAATCAATCGATGGATCATATACTGTCAAATTT
                      ____________________________________________________________
consensus             AAATTCGCCATCGTTTTTCTCGCACCTCAATCAATCGATGGATCATATACTGTCAAATTT
 
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rJMSF041C20-          AATTCAATAGGGTTTTCTAAAAGAACAGGAAGAGCAAAATATGTAAAACTTCTTAAATTC
rJMSF039C20-          AATTCAATAGGGTTTTCTAAAAGAACAGGAAGAGCAAAATATGTAAAACTTCTTAAATTC
JMSF039C20+           AATTCAATAGGGTTTTCTAAAAGAACAGGAAGAGCAAAATATGTAAAACTTCTTAAATTC
                      ____________________________________________________________
consensus             AATTCAATAGGGTTTTCTAAAAGAACAGGAAGAGCAAAATATGTAAAACTTCTTAAATTC