clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFS008E11 | Sequence | 602 | 003805 (6) | ref|XP_011100883.1| | 1e-14 | PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chl | |||||
JMFS046D05 | Sequence | 386 | 003805 (6) | ref|XP_011100883.1| | 2e-08 | PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chl | |||||
JMFS089D06 | Sequence | 631 | 003805 (6) | ref|XP_011100883.1| | 9e-49 | PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chl | |||||
JMFS110A07 | Sequence | 638 | 003805 (6) | ref|XP_011100883.1| | 2e-49 | PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chl | |||||
JMFS164H06 | Sequence | 467 | 003805 (6) | ref|XP_011100883.1| | 2e-09 | PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chl | |||||
JMSF038H12 | Sequence | 525 | 003805 (6) | ref|XP_009593328.1| | 3e-11 | PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chl | 902 | 013090 (2) | gb|KDO59967.1| | 2e-97 | hypothetical protein CISIN_1g0041151mg, partial [Citrus sinensis] gb|KDO59968.1| |
This contig is upended
. : . : . : . : . : . :
JMFS110A07+ TCCCTCC
____________________________________________________________
consensus TCCCTCC
. : . : . : . : . : . :
JMFS110A07+ TCGATAAGAGAACTTCTGATTGTTTAACCAAGCTTTGAAGATAAAAGTAAAAACAAATCC
JMFS089D06+ TCGATAAGAGAACTTCTGATTGTTTAACCAAGCTTTGAAGATAAAAGTAAAAACAAATCC
____________________________________________________________
consensus TCGATAAGAGAACTTCTGATTGTTTAACCAAGCTTTGAAGATAAAAGTAAAAACAAATCC
. : . : . : . : . : . :
JMFS110A07+ CCATATCTCCACTGTTCTNTGAATTGTTGAATAAGTCTTGAATCTATTCCATCTGCCCCC
JMFS089D06+ CCATATCTCCACTGTTCTTTGAATTGTTGAATAAGTCTTGAATCTATTCCATCTGCCCCC
____________________________________________________________
consensus CCATATCTCCACTGTTCTTTGAATTGTTGAATAAGTCTTGAATCTATTCCATCTGCCCCC
. : . : . : . : . : . :
JMFS110A07+ AGGAGCAACAGATACCTCAACTTGACCCATCCCTTTCTTCTTAAACCAAGCTTCCTCTTG
JMFS046D05+ TTCTTAAACCAAGCTTCCTCTTG
JMFS089D06+ AGGAGCAACAGATACCTCAACTTGACCCATCCCTTTCTTCTTAAACCAAGCTTCCTCTTG
JMFS164H06+ TCCTCTTG
JMFS008E11+ TACCTCAACTTGACCCATCCC-TTCTTCTTAAACCAAGCTTCCTCTTG
____________________________________________________________
consensus AGGAGCAACAGATACCTCAACTTGACCCATCCCTTTCTTCTTAAACCAAGCTTCCTCTTG
. : . : . : . : . : . :
JMFS110A07+ CCCAATCTCCTCCACAGTCTTCTTCTTTTCAAACACCTCAGAGTCAGTCGCCTTCACTTC
JMFS046D05+ CCCAATCTCCACCACAGTCTTCTTCTTTTCAAACACCTCAGAGTCAGTCGCCTTCACTTC
JMFS089D06+ CCCAATCTCCTCCACAGTCTTCTTCTTTTCAAACACCTCAGAGTCAGTCGCCTTCACTTC
JMFS164H06+ CCCAATCTCCTCCACAGTCTTCTTCTTTTCAAACACCTCAGAGTCAGTCGCCTTCACTTC
JMFS008E11+ CCCAATCTCCTCCACAGTCTTCTTCTTTTCAAACACCTCAGAGTCAGTCGCCTTCACTTC
____________________________________________________________
consensus CCCAATCTCCTCCACAGTCTTCTTCTTTTCAAACACCTCAGAGTCAGTCGCCTTCACTTC
. : . : . : . : . : . :
JMFS110A07+ CAGCACCTCCTCTCCACCTCTCCCCGCCCCTCCATTCCCATTCACATACTTCACCAAACT
JMFS046D05+ CAGCACCTCCTNTCCACCTCTCCCCGCCCCTCCATTCCCATTCACATACTTCACCAAACT
JMFS089D06+ CAGCACCTCCTCTCCACCTCTCCCCGCCCCTCCATTCCCATTCACATACTTCACCAAACT
JMFS164H06+ CAGCACCTCCTCTCCACCTCTCCCCGCCCCTCCATTCCCATTCACATACTTCACCAAACT
JMFS008E11+ CAGCACCTCCTTTCCACCTCTCCCCGCCCCTCCATTCCCATTCACATACTTCACCAAACT
JMSF038H12+ ACCTCTCCCCGCCCCTCCATTCCCATTCACATACTTCACCAAACT
____________________________________________________________
consensus CAGCACCTCCTCTCCACCTCTCCCCGCCCCTCCATTCCCATTCACATACTTCACCAAACT
. : . : . : . : . : . :
JMFS110A07+ CTGATTCTCACCCGCCAGGCTCCCATTGGTATACTTCTCTGCCAAACCACTGCGCCCATT
JMFS046D05+ CTGATTCTCACCCGCCAGGCTCCCATTGGTATACTTCTCTGCCAAACCACTGCGCCCATT
JMFS089D06+ CTGATTCTCACCCGCCAGGCTCCCATTGGTATACTTCTCTGCCAAACCACTGCGCCCATT
JMFS164H06+ CTGATTCTCACCCGCCAGGCTCCCATTGGTATACTTCTCTGCCAAACCACTGCGCCCATT
JMFS008E11+ CTGATTCTCACCCGCCAGGCTCCCATTGGTATACTTCTCTGCCAAACCACTGCGCCCATT
JMSF038H12+ CTGATTCTCACCCGCCAGGCTCCCATTGGTATACTTCTCTGCCAAACCACTGCGCCCATT
____________________________________________________________
consensus CTGATTCTCACCCGCCAGGCTCCCATTGGTATACTTCTCTGCCAAACCACTGCGCCCATT
. : . : . : . : . : . :
JMFS110A07+ CCCATTCCCGTTCCCGTTCACTTTACGCGCCAACTCTCTATCGCTCTCCTCCAATACGGC
JMFS046D05+ CCCATTCCCGTTCCCGTTCACTTTACGCGCCAACTCTCTATCGCTCTCCNCCAATACGGC
JMFS089D06+ CCCATTCCCGTTCCCGTTCACTTTACGCGCCAACTCTCTATCGCTCTCCTCCAATACGGC
JMFS164H06+ CCCATTCCCGTTCCCGTTCACTTTACGCGCCAACTCTCTATCGCTCTCCTCCAATACGGC
JMFS008E11+ CCCATTCCCGTTCCCGTTCACTTTACGCGCCAACTCTCTATCGCTCTCCTCCAATACGGC
JMSF038H12+ CCCATTCCCGTTCCCGTTCACTTTACGCGCCAACTCTCTATCGCTCTCCTCCAATACGGC
____________________________________________________________
consensus CCCATTCCCGTTCCCGTTCACTTTACGCGCCAACTCTCTATCGCTCTCCTCCAATACGGC
. : . : . : . : . : . :
JMFS110A07+ ACTCTCCTCTCTCCGCACAGCTCGGATTCTACACCGGAGAAGTGCAGCTCGCTTTGTGTG
JMFS046D05+ ACTCTCCTCTCTCCGCACAGGTCGGAATCNACACCGGAGAAGTGCAGCTCGCTTTGTGTG
JMFS089D06+ ACTCTCCTCTCTCCGCACAGCTCGGATTCTACACCGGAGAAGTGCAGCTCGCTTTGTGTG
JMFS164H06+ ACTCTCCTCTCTCCGCACAGCTCGGATTCTACACCGGAGAAGTGCAGCTCGCTTTGTGTG
JMFS008E11+ ACTCTCCTCTCTCCGCACAGCTCGGATTCTACACCGGAGAAGTGCAGCTCGCTTTGTGTG
JMSF038H12+ ACTCTCCTCTCTCCGCACAGCTCGGATTCTACACCGGAGAAGTGCAGCTCGCTTTGTGTG
____________________________________________________________
consensus ACTCTCCTCTCTCCGCACAGCTCGGATTCTACACCGGAGAAGTGCAGCTCGCTTTGTGTG
. : . : . : . : . : . :
JMFS110A07+ GCCGAACAATTTTGCGACGGGAAGCCGGATTCTTCTGCAACCGGAGTTGGGAGCCAGGAA
JMFS046D05+ GCCGAACAATTTTGCGACGGGAAGCCGGATTCTTCTGCAACCGGAGTTGGGAGCCAGGAA
JMFS089D06+ GCCGAACAATTTTGCGACGGGAAGCCGGATTCTTCTGCAACCGGAGTTGGGAGCCAGGAA
JMFS164H06+ GCCGAACAATTTTGCGACGGGAAGCCGGATTCTTCTGCAACCGGAGTTGGGAGCCAGGAA
JMFS008E11+ GCCGAACAATTTTGCGACGGGAAGCCGGATTCTTCTGCAACCGGAGTTGGGAGCCAGGAA
JMSF038H12+ GCCGAACAATTTTGCGACGGGAAGCCGGATTCTTCTGCAACCGGAGTTGGGAGCCAGGAA
____________________________________________________________
consensus GCCGAACAATTTTGCGACGGGAAGCCGGATTCTTCTGCAACCGGAGTTGGGAGCCAGGAA
. : . : . : . : . : . :
JMFS110A07+ GATCAGCTCAGGAAGCGCTGCAGCCGACAACGTGGCTGAAACACTCGCCATTTCTCTCAA
JMFS046D05+ GAT
JMFS089D06+ GATCAGCTCAGGAAGCGCTGCAGCCGACAACGTGGCTGAAACACTCGCCATTTCTCTCAA
JMFS164H06+ GATCAGCTCAGGAAGCGCTGCAGCCGACAACGTGGCTGAAACACTCGCCATTTCTCTCAA
JMFS008E11+ GATCAGCTCAGGAAGCGCTGCAGCCGACAACGTGGCTGAAACACTCGCCATTTCTCTCAA
JMSF038H12+ GATCAGCTCAGGAAGCGCTGCAGCCGACAACGTGGCTGAAACACTCGCCATTTCTCTCAA
____________________________________________________________
consensus GATCAGCTCAGGAAGCGCTGCAGCCGACAACGTGGCTGAAACACTCGCCATTTCTCTCAA
. : . : . : . : . : . :
JMFS110A07+ CTGTGCTGTATAGATAACTGATTTAACTATA
JMFS089D06+ CTGTGCTGTATAGATAACTGATTTAACTATA
JMFS164H06+ CTGTGCTGTATAGATAACTGATTTAACTATAAATTAAAG
JMFS008E11+ CTGTGCTGTATAGATAACTGATTTAACTATAAATTAAAGTAAATCAAATATATATAGCCC
JMSF038H12+ CTGTGCTGTATAGATAACTGATTTAACTATAAATTAAAGTAAATCAAATATATATAGCCC
____________________________________________________________
consensus CTGTGCTGTATAGATAACTGATTTAACTATAAATTAAAGTAAATCAAATATATATAGCCC
. : . : . : . : . : . :
JMFS008E11+ TAACTCTCATTGATTTGCTCAGACAGTGGTGTAGTGAGAGGTTTAGAGAGAGAATTGGAA
JMSF038H12+ TAACTCTCATTGATTTGCTCAGACAGTGGTGTAGTGAGAGGTTTAGAGAGAGAATTGGAA
____________________________________________________________
consensus TAACTCTCATTGATTTGCTCAGACAGTGGTGTAGTGAGAGGTTTAGAGAGAGAATTGGAA
. : . : . : . : . : . :
JMFS008E11+ ATGTGGGAAACGGAA
JMSF038H12+ ATGTGGGAAACGGAAGAAGACGGAAAGAGTGGTGGTTGAGGAAAATCGAAAATATTTTTC
____________________________________________________________
consensus ATGTGGGAAACGGAAGAAGACGGAAAGAGTGGTGGTTGAGGAAAATCGAAAATATTTTTC