Contig 003795:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF037E21-                                          CAAACAGATTACCAGGAGAACTAGCTAG
                      ____________________________________________________________
consensus                                             CAAACAGATTACCAGGAGAACTAGCTAG
 
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rJMSF037E21-          CTAACTTTTCTGAATTTTTAACTGGTTCAAAGTTATTTAGGTACAGAAAATAATTACAGC
                      ____________________________________________________________
consensus             CTAACTTTTCTGAATTTTTAACTGGTTCAAAGTTATTTAGGTACAGAAAATAATTACAGC
 
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rJMSF037E21-          TTCAATAGCTAGCAGAGAGGAGAATACAAGACTGAATTCTTTTCCATTAATGGTGTCAAT
                      ____________________________________________________________
consensus             TTCAATAGCTAGCAGAGAGGAGAATACAAGACTGAATTCTTTTCCATTAATGGTGTCAAT
 
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rJMSF037E21-          CAATGAAACCTGTTTTCTGAAACACGGCGTTGCGAACACGCCGCAGGTCTCTTCCTTTGA
JMFN006P13+                                   CGGCGTTGCGAACACGCCGCAGGTCTCTTCCTTTGA
JMSF037E21+                                                                    TGA
                      ____________________________________________________________
consensus             CAATGAAACCTGTTTTCTGAAACACGGCGTTGCGAACACGCCGCAGGTCTCTTCCTTTGA
 
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rJMSF037E21-          GCGTCCGTCCAACGCCTTCGAAGACGGAGAACGTCACGTGCGACCTGGCCACGATCACGT
JMFN006P13+           GCGTCCGTCCAACGCCTTCGAAGACGGAGAACGTCACGTGCGACCTGGCCACGATCACGT
JMSF037E21+           GCGTCCGTCCAACGCCTTCGAAGACGGAGAACGTCACGTGCGACCTGGCCACGATCACGT
                      ____________________________________________________________
consensus             GCGTCCGTCCAACGCCTTCGAAGACGGAGAACGTCACGTGCGACCTGGCCACGATCACGT
 
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rJMSF037E21-          GCGGCGGCACCATTTCCTCTTCCTCCTCGACGACCTCATCTTCCTCTTCCACTTCCACTT
JMFN006P13+           GCGGCGGCACCATTTCCTCTTCCTCCTCGACGACCTCATCTTCCTCTTCCACTTCCACTT
JMSF037E21+           GCGGCGGCACCATTTCCTCTTCCTCCTCGACGACCTCATCTTCCTCTTCCACTTCCACTT
                      ____________________________________________________________
consensus             GCGGCGGCACCATTTCCTCTTCCTCCTCGACGACCTCATCTTCCTCTTCCACTTCCACTT
 
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rJMSF037E21-          CCTCGCACCGCTTCAGTTCTCCGGCGGTGTTCTTCTTCTTCGGCCACACCGGCACGTTCA
JMFN006P13+           CCTCGCACCGCTTCAGTTCTCCGGCGGTGTTCTTCTTCTTCGGCCACACCGGCACGTTCA
JMSF037E21+           CCTCGCACCGCTTCAGTTCTCCGGCGGTGTTCTTCTTCTTCGGCCACACCGGCACGTTCA
                      ____________________________________________________________
consensus             CCTCGCACCGCTTCAGTTCTCCGGCGGTGTTCTTCTTCTTCGGCCACACCGGCACGTTCA
 
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rJMSF037E21-          CGGGCGCTGACTGGTGGAACTTCGCGACGCCATGGGAGCTGGGACGGGAATTCACCGCCG
JMFN006P13+           CGGGCGCTGACTGGTGGAACTTCGCGACGCCATGGGAGCTGGGACGGGAATTCACCGCCG
JMSF037E21+           CGGGCGCTGACTGGTGGAACTTCGCGACGCCATGGGAGCTGGGACGGGAATTCACCGCCG
                      ____________________________________________________________
consensus             CGGGCGCTGACTGGTGGAACTTCGCGACGCCATGGGAGCTGGGACGGGAATTCACCGCCG
 
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rJMSF037E21-          GAATCACTCTGGCCGCCGAGGCCGCGGCGGCGGAGAGGGAAGGGTTGAGGGTGGATTTGC
JMFN006P13+           GAATCACTCTGGCCGCCGAGGCCGCGGCGGCGGAGAAGGAAGGGTTGAGGGTGGATTTGC
JMSF037E21+           GAATCACTCTGGCCGCCGAGGCCGCGGCGGCGGAGAGGGAAGGGTTGAGGGTGGATTTGC
                      ____________________________________________________________
consensus             GAATCACTCTGGCCGCCGAGGCCGCGGCGGCGGAGAGGGAAGGGTTGAGGGTGGATTTGC
 
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rJMSF037E21-          GCCGCACCAGATTCTCGCAGTCTCCGGCGAGCGCTGCGGAGAGGCCGGACGTGGACGGCT
JMFN006P13+           GCCGCACCAGATTCTCGCAGTCTCCGGCGAGCGCTGCGGAGAGGCCGGACGTGGACGGCT
JMSF037E21+           GCCGCACCAGATTCTCGCAGTCTCCGGCGAGCGCTGCGGAGAGGCCGGACGTGGACGGCT
                      ____________________________________________________________
consensus             GCCGCACCAGATTCTCGCAGTCTCCGGCGAGCGCTGCGGAGAGGCCGGACGTGGACGGCT
 
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rJMSF037E21-          TGAAGTTGGTGTGAGGACGGTGGANGCCGGGCGGCGGCGGAGGAAAAGGGGCGGCGTAGG
JMFN006P13+           TGAAGTTGGTGTGAGGACGGTGGAGGCCGGGCGGCGGCGGAGGAGAAGGGGCGGCGTAGG
JMSF037E21+           TGAAGTTGGTGTGAGGACGGTGGAGGCCGGGCGGCGGCGGAGGAGAAGGGGCGGCGTAGG
                      ____________________________________________________________
consensus             TGAAGTTGGTGTGAGGACGGTGGAGGCCGGGCGGCGGCGGAGGAGAAGGGGCGGCGTAGG
 
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rJMSF037E21-          CGAAGTTTTCGGAGGAGTAGTCGGCGGAAAACGACGACCAAACGACGTCG          
JMFN006P13+           CGAAGTTTTCGGAGGAGTAGTCGGCGGAAGACGACGACCAAACGACGTCGCTCTCGTCGA
JMSF037E21+           CGAAGTTTTCGGAGGAGTAGTCGGCGGAAGACGACGACCAAACGACGTCGCTCTCGTCGA
                      ____________________________________________________________
consensus             CGAAGTTTTCGGAGGAGTAGTCGGCGGAAGACGACGACCAAACGACGTCGCTCTCGTCGA
 
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JMFN006P13+           GCTCGAGCGGGTCGGAGTCGGGTTGTTTGAGAAGACCCATGAAGCGGAAGGATGAGGACG
JMSF037E21+           GCTCGAGCGGGTCGGAGTCGGGTTGTTTGAGAAGACCCATGAAGCGGAAGGATGAGGACG
                      ____________________________________________________________
consensus             GCTCGAGCGGGTCGGAGTCGGGTTGTTTGAGAAGACCCATGAAGCGGAAGGATGAGGACG
 
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JMFN006P13+           ACGGCGAGATGTTGCTTTGCAGAGCAACCATGAAAGTTGAA                   
JMSF037E21+           ACGGCGAGATGTTGCTTTGCAGAGCAACCATGAAAGTTGAAACGTTACTGCCCTCCTTCC
                      ____________________________________________________________
consensus             ACGGCGAGATGTTGCTTTGCAGAGCAACCATGAAAGTTGAAACGTTACTGCCCTCCTTCC