Contig 003793:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF029C15Sequence657003793 (2)ref|XP_011071147.1|1e-94PREDICTED: BTB/POZ domain-containing protein At1g67900-like [Sesamum indicum] r
JMSF037A21Sequence666003793 (2)gb|KDO82222.1|1e-107hypothetical protein CISIN_1g006846mg [Citrus sinensis]

Alignment

This contig is upended


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JMSF029C15+                                                        TCTTCGAGCTGGATC
                      ____________________________________________________________
consensus                                                          TCTTCGAGCTGGATC
 
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JMSF029C15+           GCGACCCGTCTTGCTAGCTCCGTTTTGGAGGCGGTGGAGGCTCGGAGAATGTTGGCGGCT
                      ____________________________________________________________
consensus             GCGACCCGTCTTGCTAGCTCCGTTTTGGAGGCGGTGGAGGCTCGGAGAATGTTGGCGGCT
 
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JMSF029C15+           TTGAGGAGCTTAAGGAGGAAGCCGGTGGAAACGGCGCCCTTTTCCGGCGGTAGAAGGCTT
                      ____________________________________________________________
consensus             TTGAGGAGCTTAAGGAGGAAGCCGGTGGAAACGGCGCCCTTTTCCGGCGGTAGAAGGCTT
 
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JMSF029C15+           ATGATTGACTCCAAAATGAGAGCGTGTTTGGAAAAGACATCCGCGAGAGAATCTGCAGAT
                      ____________________________________________________________
consensus             ATGATTGACTCCAAAATGAGAGCGTGTTTGGAAAAGACATCCGCGAGAGAATCTGCAGAT
 
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JMSF029C15+           TCCTCGGATTTGGCGTATTTGGAAACGTTGGGTAGCCACCGCGAGGCGTAGATTCTCAGG
                      ____________________________________________________________
consensus             TCCTCGGATTTGGCGTATTTGGAAACGTTGGGTAGCCACCGCGAGGCGTAGATTCTCAGG
 
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JMSF029C15+           GCGTCGCCGATTAGGTTCGCCGGAACTCTCACCCCTGATTTTATAGCAATCATGGTTCTC
                      ____________________________________________________________
consensus             GCGTCGCCGATTAGGTTCGCCGGAACTCTCACCCCTGATTTTATAGCAATCATGGTTCTC
 
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JMSF029C15+           CAGTATAAATCCACACTCAATTCCGCCAAATCCTCCGCCCACCACCCCTTCCCCGAGGAC
JMSF037A21+                                                                 GAGGAC
                      ____________________________________________________________
consensus             CAGTATAAATCCACACTCAATTCCGCCAAATCCTCCGCCCACCACCCCTTCCCCGAGGAC
 
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JMSF029C15+           GGGGTTTTCTTGGTGTGCCGGAGACTCTCCGATCCATTACAGGAAACCACATCATCCCTC
JMSF037A21+           GGGGTTTTCTTGGTGTGCCGGAGACTCTCCGATCCATTACAGGAAACCACATCATCCCTC
                      ____________________________________________________________
consensus             GGGGTTTTCTTGGTGTGCCGGAGACTCTCCGATCCATTACAGGAAACCACATCATCCCTC
 
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JMSF029C15+           CCGCCGGCGCGGCGGGAGTAGCTCCGGGAAAGATTCATCTTGGTGGGATGGGCCAGAACC
JMSF037A21+           CCGCCGGCGCGGCGGGAGTAGCTCCGGGAAAGATTCATCTTGGTGGGATGGGCCAGAACC
                      ____________________________________________________________
consensus             CCGCCGGCGCGGCGGGAGTAGCTCCGGGAAAGATTCATCTTGGTGGGATGGGCCAGAACC
 
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JMSF029C15+           TTGGAGGCAATGGCGTCGATACACCGGCCGGTGATCCCCAGATCCTCCGACCACAGGGCA
JMSF037A21+           TTGGAGGCAATGGCGTCGATACACCGGCCGGTGATCCCCAGATCCTCCGACCACAGGGCA
                      ____________________________________________________________
consensus             TTGGAGGCAATGGCGTCGATACACCGGCCGGTGATCCCCAGATCCTCCGACCACAGGGCA
 
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JMSF029C15+           AACGCCTTGGTGCTCTGAAGCGTCACGATGGCGTCTTTCCACCCCTGCAAAATGCAGGAA
JMSF037A21+           AACGCCTTGGTGCTCTGAAGCGTCACGATGGCGTCTTTCCACCCCTGCAAAATGCAGGAA
                      ____________________________________________________________
consensus             AACGCCTTGGTGCTCTGAAGCGTCACGATGGCGTCTTTCCACCCCTGCAAAATGCAGGAA
 
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JMSF029C15+           TTCAAGAAAGCTTCCAGCTTGAATATCAAGTTCCCCTTC                     
JMSF037A21+           TTCAAGAAAGCTTCCAGCTTGAATATCAAGTTCCCCTTCTCCACCTCCTCCGTCATCTGC
                      ____________________________________________________________
consensus             TTCAAGAAAGCTTCCAGCTTGAATATCAAGTTCCCCTTCTCCACCTCCTCCGTCATCTGC
 
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JMSF037A21+           AGATACTCCGCCGCGCACCGGGCGGAGACAATGTTGTAGGCGCTGAGCGTGACGGTGATG
                      ____________________________________________________________
consensus             AGATACTCCGCCGCGCACCGGGCGGAGACAATGTTGTAGGCGCTGAGCGTGACGGTGATG
 
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JMSF037A21+           CCGTAGCAGAACTTGGCGCACAGCTCGAACGCCTCCACCCCGCCCGGAAAATCCGGCAGC
                      ____________________________________________________________
consensus             CCGTAGCAGAACTTGGCGCACAGCTCGAACGCCTCCACCCCGCCCGGAAAATCCGGCAGC
 
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JMSF037A21+           TGCACTATCTGGTGCTGCGAACTCTCCGGGCTCTGCGACTCCGAACACAACCTCTGCAAC
                      ____________________________________________________________
consensus             TGCACTATCTGGTGCTGCGAACTCTCCGGGCTCTGCGACTCCGAACACAACCTCTGCAAC
 
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JMSF037A21+           CTCAAACACTTCGACAACAGCGGAAACTTGTGAAGCAAATATCTGCTCCCTTTGACTTGG
                      ____________________________________________________________
consensus             CTCAAACACTTCGACAACAGCGGAAACTTGTGAAGCAAATATCTGCTCCCTTTGACTTGG
 
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JMSF037A21+           ACTATGAGATCACTCGAAACTTCCGAGGAAACCGATCTGACGGCTTCAGAGGTGTAGAAA
                      ____________________________________________________________
consensus             ACTATGAGATCACTCGAAACTTCCGAGGAAACCGATCTGACGGCTTCAGAGGTGTAGAAA
 
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JMSF037A21+           GTATCCGGCCGAGATCCAAGTTTCATAAACTTCATGGCTGCAAGTCTGCAACTTTATCTC
                      ____________________________________________________________
consensus             GTATCCGGCCGAGATCCAAGTTTCATAAACTTCATGGCTGCAAGTCTGCAACTTTATCTC