| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF045N18 | Sequence | 627 | 003787 (5) | ref|XP_010261260.1| | 4e-26 | PREDICTED: uncharacterized WD repeat-containing protein C2A9.03-like [Nelumbo n | 597 | 012444 (4) | ref|XP_006354002.1| | 1e-96 | PREDICTED: uncharacterized WD repeat-containing protein C2A9.03-like [Solanum t |
| JMFS104C01 | Sequence | 570 | 003787 (5) | ref|XP_010261260.1| | 5e-21 | PREDICTED: uncharacterized WD repeat-containing protein C2A9.03-like [Nelumbo n | |||||
| JMSF004G20 | Sequence | 355 | 003787 (5) | ||||||||
| JMSF029F20 | Sequence | 633 | 003787 (5) | ref|XP_004237892.1| | 4e-38 | PREDICTED: uncharacterized WD repeat-containing protein C2A9.03 [Solanum lycope | 739 | 012444 (4) | ref|XP_006354002.1| | 6e-132 | PREDICTED: uncharacterized WD repeat-containing protein C2A9.03-like [Solanum t |
| JMSF036M03 | Sequence | 661 | 003787 (5) | ref|XP_004237892.1| | 8e-33 | PREDICTED: uncharacterized WD repeat-containing protein C2A9.03 [Solanum lycope | 660 | 012444 (4) | ref|XP_002307391.2| | 5e-123 | hypothetical protein POPTR_0005s16680g [Populus trichocarpa] gb|EEE94387.2| hypo |
This contig is upended
. : . : . : . : . : . :
JMSF029F20+ GACAAGCCTTGTGTTGAACTGG
____________________________________________________________
consensus GACAAGCCTTGTGTTGAACTGG
. : . : . : . : . : . :
JMSF029F20+ AAGTCAAAGAAGCTGTGCCCTTTCACCACTTCCTTGTAGTCCTTTTTAAGCTCCTCTCGA
JMFF045N18+ AGTCAAAGAAGCTGTGCCCTTTCACCACTTCC-TGTAGTCC-TTTTAAGCTCCTCTCGA
JMSF036M03+ AGTCAAAGAAGCTGTGCCCTTTCACCACTTCCTTGTAGTCCTTTTTAAGCTCCTCTCGA
____________________________________________________________
consensus AAGTCAAAGAAGCTGTGCCCTTTCACCACTTCCTTGTAGTCCTTTTTAAGCTCCTCTCGA
. : . : . : . : . : . :
JMSF029F20+ GAGCGCGAGAGGCTTTCATAGTTTTTGTATTGTTTCAACCTCGTTTCACGGTAATTCTCT
JMFF045N18+ GAGCGCGAGAGGCTTTCATAGTTTTTGTATTGTTTCAACCTCGTTTCACGGTAATTCTCT
JMFS104C01+ AGGCTTTCATAGTTTTTGTATTGTTTCAACCTCGTTTCACGGTAATTCTCT
JMSF036M03+ GAGCGCGAGAGGCTTTCATAGTTTTTGTATTGTTTCAACCTCGTTTCACGGTAATTCTCT
____________________________________________________________
consensus GAGCGCGAGAGGCTTTCATAGTTTTTGTATTGTTTCAACCTCGTTTCACGGTAATTCTCT
. : . : . : . : . : . :
JMSF029F20+ CTGGTAAAATTGAAACGTTCCCACGGAATACCTTGGATATCCTTGCCATGTCTGGCTTCA
JMFF045N18+ CTGGTAAAATTGAAACGTTCCCACGGAATACCTTGGATATCCTTGCCATGTCTGGCTTCA
JMFS104C01+ CTGGTAAAATTGAAACGTTCCCACGGAATACCTTGGATATCCTTGCCATGTCTGGCTTCA
JMSF036M03+ CTGGTAAAATTGAAACGTTCCCACGGAATACCTTGGATATCCTTGCCATGTCTGGCTTCA
____________________________________________________________
consensus CTGGTAAAATTGAAACGTTCCCACGGAATACCTTGGATATCCTTGCCATGTCTGGCTTCA
. : . : . : . : . : . :
JMSF029F20+ AGAGCTGATGTATCGGTCACCGGATTACTCGTTTCAAAATCATCCTCAAAGTCAGAATCT
JMFF045N18+ AGAGCTGATGTATCGGTCACCGGATTACTCGTTTCAAAATCATCCTCAAAGTCAGAATCT
JMFS104C01+ AGAGCTGATGTATCGGTCACCGGATTACTCGTTTCAAAATCATCCTCAAAGTCAGAATCT
JMSF036M03+ AGAGCTGATGTATCGGTCACCGGATTACTCGTTTCAAAATCATCCTCAAAGTCAGAATCT
____________________________________________________________
consensus AGAGCTGATGTATCGGTCACCGGATTACTCGTTTCAAAATCATCCTCAAAGTCAGAATCT
. : . : . : . : . : . :
JMSF029F20+ CCAGAGTCCTCAACAACAGGCCACCGAGATTCGACCGTGCTGCCTTGAAATGGACTGTCA
JMFF045N18+ CCAGAGTCCTCAACAACAGGCCACCGAGATTCGACCGTGCTGCCTTGAAATGGACTGTCA
JMFS104C01+ CCAGAGTCCTCAACAACAGGCCACCGAGATTCGACCGTGCTGCCTTGAAATGGACTGTCA
JMSF036M03+ CCAGAGTCCTCAACAACAGGCCACCGAGATTCGACCGTGCTGCCTTGAAATGGACTGTCA
____________________________________________________________
consensus CCAGAGTCCTCAACAACAGGCCACCGAGATTCGACCGTGCTGCCTTGAAATGGACTGTCA
. : . : . : . : . : . :
JMSF029F20+ TCAAAACCAGACACGTTATGGTAGTGATCAACCATGGACTCGTGCTCGCGGCTCCTATGA
JMFF045N18+ TCAAAACCAGACACGTTATGGTAGTGATCAACCATGGACTCGTGCTCGCGGCTCCTATGA
JMFS104C01+ TCAAAACCAGACACGTTATGGTAGTGATCAACCATGGACTCGTGCTCGCGGCTCCTATGA
JMSF004G20+ ACCAGACACGTTATGGTAGTGATCAACCATGGACTCGTGCTCGCGGCTCCTATGA
JMSF036M03+ TCAAAACCAGACACGTTATGGTAGTGATCAACCATGGACTCGTGCTCGCGGCTCCTATGA
____________________________________________________________
consensus TCAAAACCAGACACGTTATGGTAGTGATCAACCATGGACTCGTGCTCGCGGCTCCTATGA
. : . : . : . : . : . :
JMSF029F20+ GTTTGCGCCATTGTCCAGAAATAACACTTGAAAAAACCGAAGCGAGCTAACGAAAGCTTT
JMFF045N18+ GTTTGCGCCATTGTCCAGAAATAACACTTGAAAAAACCGAAGCGAGCTAACGAAAGCTTT
JMFS104C01+ GTTTGCGCCATTGTCCAGAAATAACACTTGAAAAAACCGAAGCGAGCTAACGAAAGCTTT
JMSF004G20+ GTTTGCGCCATTGTCCAGAAATAACACTTGAAAAAACCGAAGCGAGCTAACGAAAGCTTT
JMSF036M03+ GTTTGCGCCATTGTCCAGAAATAACACTTGAAAAAACCGAAGCGAGCTAACGAAAGCTTT
____________________________________________________________
consensus GTTTGCGCCATTGTCCAGAAATAACACTTGAAAAAACCGAAGCGAGCTAACGAAAGCTTT
. : . : . : . : . : . :
JMSF029F20+ GAAGTTACGGAGAATTGAGGCTTTGAAACTAAGTAACTAACGCCGACGAAAGAGAGACAG
JMFF045N18+ GAAGTTACGGAGAATTGAGGCTTTGAAACTAAGTAACTAACGCCGACGAAAGAGAGACAG
JMFS104C01+ GAAGTTACGGAGAATTGAGGCTTTGAAACTAAGTAACTAACGCCGACGAAAGAGAGACAG
JMSF004G20+ GAAGTTACGGAGAATTGAGGCTTTGAAACTAAGTAACTAACGCCGACGAAAGAGAGACAG
JMSF036M03+ GAAGTTACGGAGAATTGAGGCTTTGAAACTAAGTAACTAACGCCGACGAAAGAGAGACAG
____________________________________________________________
consensus GAAGTTACGGAGAATTGAGGCTTTGAAACTAAGTAACTAACGCCGACGAAAGAGAGACAG
. : . : . : . : . : . :
JMSF029F20+ AGTATGTTCGCAGGGACGGTTCAAAGAATTCCCGATCGGAAAACAACGCCGACTCCTTGG
JMFF045N18+ AGTATGTTCGCAGGGACGGTTCAAAGAATTCCCGATCGGAAAACAACGCCGACTCCTTGG
JMFS104C01+ AGTATGTTCGCAGGGACGGTTCAAAGAATTCCCGATCGGAAAACAACGCCGACTCCTTGG
JMSF004G20+ AGTATGTTCGCAGGGACGGTTCAAAGAATTCCCGATCGGAAAACAACGCCGACTCCTTGG
JMSF036M03+ AGTATGTTCGCAGGGACGGTTCAAAGAATTCCCGATCGGAAAACAACGCCGACTCCTTGG
____________________________________________________________
consensus AGTATGTTCGCAGGGACGGTTCAAAGAATTCCCGATCGGAAAACAACGCCGACTCCTTGG
. : . : . : . : . : . :
JMSF029F20+ GAAATCGATCGCCGGAATCGAAGATTTGTACTACGAAGACGGATGCCAGTAGCAAACGGA
JMFF045N18+ GAAATCGATCGCCGGAATCGAAGATTTGTACTACGAAGACGGATGCCAGTAGCAAACGGA
JMFS104C01+ GAAATCGATCGCCGGAATCGAAGATTTGTACTACGAAGACGGATGCCAGTAGCAAACGGA
JMSF004G20+ GAAATCGATCGCCGGAATCGAAGATTTGTACTACGAAGACGGATGCCAGTAGCAAACGGA
JMSF036M03+ GAAATCGATCGCCGGAATCGAAGATTTGTACTACGAAGACGGATGCCAGTAGCAAACGGA
____________________________________________________________
consensus GAAATCGATCGCCGGAATCGAAGATTTGTACTACGAAGACGGATGCCAGTAGCAAACGGA
. : . : . : . : . : . :
JMSF029F20+ GAGCTCCAG
JMFF045N18+ GAGCTCCAGTGCTTGCCGCCGGTGAAGTA
JMFS104C01+ GAGCTCCAGTGCTTGCCGCCGGTGAAGTACAGAACGTAA
JMSF004G20+ GAGCTCCAGTGCTTGCCGCCGGTGAAGTACAGAACGTAATTATAGCGGTAAATCCTTGCC
JMSF036M03+ GAGCTCCAGTGCTTGCCGCCGGTGAAGTACAGAACGTAATTATAGCGGTAAATCCTTGCC
____________________________________________________________
consensus GAGCTCCAGTGCTTGCCGCCGGTGAAGTACAGAACGTAATTATAGCGGTAAATCCTTGCC